RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, human

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1-210	ENST00000449058	FAM110D	Q8TAY7	271 aa	Predicted RBP	13.18	□□□□□ -0.3
TOM1-210	ENST00000449058	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	13.17	□□□□□ -0.3
TOM1-210	ENST00000449058	OR4C46	A6NHA9	309 aa		13.17	□□□□□ -0.3
TOM1-210	ENST00000449058	FBLL1	A6NHQ2	334 aa	Known RBP	13.17	□□□□□ -0.3
TOM1-210	ENST00000449058	SH2D1A	O60880	128 aa		13.17	□□□□□ -0.3
TOM1-210	ENST00000449058	IGKV2D-40	P01614	121 aa	Predicted RBP	13.17	□□□□□ -0.3
TOM1-210	ENST00000449058	SAPCD1	Q5SSQ6	148 aa		13.17	□□□□□ -0.3
TOM1-210	ENST00000449058	TMUB1	Q9BVT8	246 aa		13.17	□□□□□ -0.3
TOM1-210	ENST00000449058	IGHG4	P01861	327 aa		13.17	□□□□□ -0.3
TOM1-210	ENST00000449058	PRR25	Q96S07	402 aa		13.17	□□□□□ -0.3
TOM1-210	ENST00000449058	TMEM189	A5PLL7	270 aa		13.16	□□□□□ -0.3
TOM1-210	ENST00000449058	EFNA4	P52798	201 aa		13.16	□□□□□ -0.3
TOM1-210	ENST00000449058	GAGE1	Q13065	139 aa		13.16	□□□□□ -0.3
TOM1-210	ENST00000449058	ZNF502	Q8TBZ5	544 aa		13.16	□□□□□ -0.3
TOM1-210	ENST00000449058	DLEU1	O43261	78 aa		13.16	□□□□□ -0.3
TOM1-210	ENST00000449058	LYZL1	Q6UWQ5	148 aa		13.16	□□□□□ -0.3
TOM1-210	ENST00000449058	STPG4	Q8N801	248 aa		13.16	□□□□□ -0.3
TOM1-210	ENST00000449058	TPPP3	Q9BW30	176 aa		13.16	□□□□□ -0.3
TOM1-210	ENST00000449058	UBTD1	Q9HAC8	227 aa		13.15	□□□□□ -0.3
TOM1-210	ENST00000449058	WNK2	Q9Y3S1	2297 aa		13.15	□□□□□ -0.3
TOM1-210	ENST00000449058	CSN3	P07498	182 aa		13.15	□□□□□ -0.3
TOM1-210	ENST00000449058	S100A7	P31151	101 aa		13.15	□□□□□ -0.3
TOM1-210	ENST00000449058	TFPI2	P48307	235 aa		13.15	□□□□□ -0.3
TOM1-210	ENST00000449058	LMO4	P61968	165 aa		13.15	□□□□□ -0.3
TOM1-210	ENST00000449058	PET117	Q6UWS5	81 aa		13.15	□□□□□ -0.3
TOM1-210	ENST00000449058	SAA4	P35542	130 aa		13.14	□□□□□ -0.31
TOM1-210	ENST00000449058	C15orf32	Q32M92	178 aa		13.14	□□□□□ -0.31
TOM1-210	ENST00000449058	UNQ5815/PRO19632	Q6UWF5	114 aa		13.14	□□□□□ -0.31
TOM1-210	ENST00000449058	MAP1LC3C	Q9BXW4	147 aa		13.14	□□□□□ -0.31
TOM1-210	ENST00000449058	ST20	Q9HBF5	79 aa		13.14	□□□□□ -0.31
TOM1-210	ENST00000449058	AP5S1	Q9NUS5	200 aa		13.14	□□□□□ -0.31
TOM1-210	ENST00000449058	HSPB8	Q9UJY1	196 aa		13.14	□□□□□ -0.31
TOM1-210	ENST00000449058		U3KQK5	164 aa		13.14	□□□□□ -0.31
TOM1-210	ENST00000449058	ATP6V0E1	O15342	81 aa		13.14	□□□□□ -0.31
TOM1-210	ENST00000449058	VGLL1	Q99990	258 aa		13.14	□□□□□ -0.31
TOM1-210	ENST00000449058	ZFAND3	Q9H8U3	227 aa		13.14	□□□□□ -0.31
TOM1-210	ENST00000449058	TMSB15B	A0A087X1C1	80 aa		13.13	□□□□□ -0.31
TOM1-210	ENST00000449058	GPR183	P32249	361 aa		13.13	□□□□□ -0.31
TOM1-210	ENST00000449058	TMEM191A	Q9H0A3	160 aa		13.13	□□□□□ -0.31
TOM1-210	ENST00000449058		A0A087X0K7	114 aa		13.13	□□□□□ -0.31
TOM1-210	ENST00000449058	TMEM213	A2RRL7	107 aa		13.13	□□□□□ -0.31
TOM1-210	ENST00000449058	HLA-DMB	P28068	263 aa		13.13	□□□□□ -0.31
TOM1-210	ENST00000449058	RHOG	P84095	191 aa		13.13	□□□□□ -0.31
TOM1-210	ENST00000449058	ECSCR	Q19T08	205 aa		13.13	□□□□□ -0.31
TOM1-210	ENST00000449058	FAM104B	Q5XKR9	115 aa		13.13	□□□□□ -0.31
TOM1-210	ENST00000449058		Q8TAT8	98 aa		13.13	□□□□□ -0.31
TOM1-210	ENST00000449058	SPTBN4	Q9H254	2564 aa		13.12	□□□□□ -0.31
TOM1-210	ENST00000449058	HIVEP3	Q5T1R4	2406 aa		13.12	□□□□□ -0.31
TOM1-210	ENST00000449058	COL6A6	A6NMZ7	2263 aa		13.12	□□□□□ -0.31
TOM1-210	ENST00000449058	IGHV3OR16-8	A0A075B7F1	116 aa		13.12	□□□□□ -0.31
TOM1-210	ENST00000449058	ZNF80	P51504	273 aa	Predicted RBP	13.12	□□□□□ -0.31
TOM1-210	ENST00000449058	RPS20	P60866	119 aa	Known RBP	13.12	□□□□□ -0.31
TOM1-210	ENST00000449058	IGFL4	Q6B9Z1	124 aa		13.12	□□□□□ -0.31
TOM1-210	ENST00000449058	IGHV3-35	A0A0C4DH35	117 aa		13.12	□□□□□ -0.31
TOM1-210	ENST00000449058	ZNF575	Q86XF7	245 aa		13.12	□□□□□ -0.31
TOM1-210	ENST00000449058	BPESC1	Q9GZL8	116 aa		13.12	□□□□□ -0.31
TOM1-210	ENST00000449058	BUB3	O43684	328 aa		13.11	□□□□□ -0.31
TOM1-210	ENST00000449058	CLEC3B	P05452	202 aa		13.11	□□□□□ -0.31
TOM1-210	ENST00000449058	BMI1	P35226	326 aa		13.11	□□□□□ -0.31
TOM1-210	ENST00000449058	RAB9A	P51151	201 aa		13.11	□□□□□ -0.31
TOM1-210	ENST00000449058	SRSF2	Q01130	221 aa	Known RBP	13.11	□□□□□ -0.31
TOM1-210	ENST00000449058	FA2H	Q7L5A8	372 aa		13.11	□□□□□ -0.31
TOM1-210	ENST00000449058	PRSS3P2	Q8NHM4	247 aa		13.11	□□□□□ -0.31
TOM1-210	ENST00000449058	PSMG3-AS1	Q96PY0	264 aa		13.11	□□□□□ -0.31
TOM1-210	ENST00000449058	CENPVL3	A0A0U1RRI6	287 aa		13.1	□□□□□ -0.31
TOM1-210	ENST00000449058	hDV102S1	A0JD36	115 aa		13.1	□□□□□ -0.31
TOM1-210	ENST00000449058		D6R8Y8	96 aa		13.1	□□□□□ -0.31
TOM1-210	ENST00000449058	IGLC6	P0CF74	106 aa		13.1	□□□□□ -0.31
TOM1-210	ENST00000449058	LY6D	Q14210	128 aa		13.1	□□□□□ -0.31
TOM1-210	ENST00000449058	LINC01545	Q5VT33	79 aa		13.1	□□□□□ -0.31
TOM1-210	ENST00000449058	CCDC140	Q96MF4	163 aa		13.1	□□□□□ -0.31
TOM1-210	ENST00000449058	ZNF747	Q9BV97	191 aa		13.1	□□□□□ -0.31
TOM1-210	ENST00000449058	GOLT1B	Q9Y3E0	138 aa		13.1	□□□□□ -0.31
TOM1-210	ENST00000449058	SPTBN1	Q01082	2364 aa	Known RBP	13.1	□□□□□ -0.31
TOM1-210	ENST00000449058	NPS	P0C0P6	89 aa		13.1	□□□□□ -0.31
TOM1-210	ENST00000449058	AMN1	Q8IY45	258 aa		13.1	□□□□□ -0.31
TOM1-210	ENST00000449058	PIP4P2	Q8N4L2	257 aa		13.1	□□□□□ -0.31
TOM1-210	ENST00000449058	ITLN2	Q8WWU7	325 aa	Predicted RBP	13.1	□□□□□ -0.31
TOM1-210	ENST00000449058	CLPSL1	A2RUU4	121 aa		13.09	□□□□□ -0.31
TOM1-210	ENST00000449058	PRSS47	A8MTI9	375 aa		13.09	□□□□□ -0.31
TOM1-210	ENST00000449058	NPFF	O15130	113 aa		13.09	□□□□□ -0.31
TOM1-210	ENST00000449058	HINT1	P49773	126 aa	Predicted RBP	13.09	□□□□□ -0.31
TOM1-210	ENST00000449058	OR10AG1	Q8NH19	301 aa		13.09	□□□□□ -0.31
TOM1-210	ENST00000449058	CSMD1	Q96PZ7	3565 aa		13.09	□□□□□ -0.31
TOM1-210	ENST00000449058	LINC01548	A6NM66	108 aa		13.09	□□□□□ -0.31
TOM1-210	ENST00000449058	IFI27	P40305	119 aa	Predicted RBP	13.09	□□□□□ -0.31
TOM1-210	ENST00000449058	FER1L6-AS1	Q8NA97	138 aa		13.09	□□□□□ -0.31
TOM1-210	ENST00000449058	PRELID3A	Q96N28	172 aa		13.09	□□□□□ -0.31
TOM1-210	ENST00000449058	SIGLEC8	Q9NYZ4	499 aa		13.09	□□□□□ -0.31
TOM1-210	ENST00000449058		A0A096LNJ9	63 aa		13.08	□□□□□ -0.32
TOM1-210	ENST00000449058		G3V318	75 aa		13.08	□□□□□ -0.32
TOM1-210	ENST00000449058	GOSR1	O95249	250 aa		13.08	□□□□□ -0.32
TOM1-210	ENST00000449058	MRPL51	Q4U2R6	128 aa	Known RBP	13.08	□□□□□ -0.32
TOM1-210	ENST00000449058	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		13.08	□□□□□ -0.32
TOM1-210	ENST00000449058	ORMDL3	Q8N138	153 aa		13.08	□□□□□ -0.32
TOM1-210	ENST00000449058	FAM106A	Q4KMX7	169 aa		13.08	□□□□□ -0.32
TOM1-210	ENST00000449058	MCRIP2	Q9BUT9	160 aa	Known RBP	13.08	□□□□□ -0.32
TOM1-210	ENST00000449058	MED13L	Q71F56	2210 aa		13.08	□□□□□ -0.32
TOM1-210	ENST00000449058	RBAKDN	A6NC62	111 aa		13.07	□□□□□ -0.32
TOM1-210	ENST00000449058	PRAC2	D3DTV9	90 aa		13.07	□□□□□ -0.32

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