RNA–Protein interactions for RNA: ENST00000439029.5

SMPD4-208, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-208ENST00000439029 TXNDC17Q9BRA2 123 aa6.32□□□□□ -1.4
SMPD4-208ENST00000439029 SLC25A31Q9H0C2 315 aa6.32□□□□□ -1.4
SMPD4-208ENST00000439029 HIGD1AQ9Y241 93 aa6.32□□□□□ -1.4
SMPD4-208ENST00000439029 TRAV8-6A0A0B4J262 113 aa6.31□□□□□ -1.4
SMPD4-208ENST00000439029 C7orf71A4D174 169 aa6.31□□□□□ -1.4
SMPD4-208ENST00000439029 TNFAIP8O95379 198 aa6.31□□□□□ -1.4
SMPD4-208ENST00000439029 ANXA7P20073 488 aaKnown RBP6.31□□□□□ -1.4
SMPD4-208ENST00000439029 TGFBR1P36897 503 aa6.31□□□□□ -1.4
SMPD4-208ENST00000439029 ERCC8Q13216 396 aa6.31□□□□□ -1.4
SMPD4-208ENST00000439029 RNASE10Q5GAN6 216 aaKnown RBP6.31□□□□□ -1.4
SMPD4-208ENST00000439029 ACOT7LQ6ZUV0 252 aa6.31□□□□□ -1.4
SMPD4-208ENST00000439029 OR4D10Q8NGI6 311 aa6.31□□□□□ -1.4
SMPD4-208ENST00000439029 ZFAND1Q8TCF1 268 aa6.31□□□□□ -1.4
SMPD4-208ENST00000439029 VCXQ9H320 206 aa6.31□□□□□ -1.4
SMPD4-208ENST00000439029 DPH3P1Q9H4G8 78 aa6.31□□□□□ -1.4
SMPD4-208ENST00000439029 NAA60Q9H7X0 242 aa6.31□□□□□ -1.4
SMPD4-208ENST00000439029 ZNF331Q9NQX6 463 aaPredicted RBP6.31□□□□□ -1.4
SMPD4-208ENST00000439029 HSPB7Q9UBY9 170 aa6.31□□□□□ -1.4
SMPD4-208ENST00000439029 MRPS12O15235 138 aaKnown RBP6.3□□□□□ -1.4
SMPD4-208ENST00000439029 HYPMO75409 117 aa6.3□□□□□ -1.4
SMPD4-208ENST00000439029 ORM1P02763 201 aa6.3□□□□□ -1.4
SMPD4-208ENST00000439029 CD3DP04234 171 aa6.3□□□□□ -1.4
SMPD4-208ENST00000439029 RAB11AP62491 216 aa6.3□□□□□ -1.4
SMPD4-208ENST00000439029 AKR1C1Q04828 323 aa6.3□□□□□ -1.4
SMPD4-208ENST00000439029 ZNF846Q147U1 533 aa6.3□□□□□ -1.4
SMPD4-208ENST00000439029 ANXA2RQ3ZCQ2 193 aa6.3□□□□□ -1.4
SMPD4-208ENST00000439029 GPR107Q5VW38 600 aa6.3□□□□□ -1.4
SMPD4-208ENST00000439029 KRTAP3-3Q9BYR6 98 aa6.3□□□□□ -1.4
SMPD4-208ENST00000439029 KRTAP3-2Q9BYR7 98 aa6.3□□□□□ -1.4
SMPD4-208ENST00000439029 RPH3ALQ9UNE2 315 aa6.3□□□□□ -1.4
SMPD4-208ENST00000439029 IGHV3-16A0A0C4DH30 117 aa6.29□□□□□ -1.4
SMPD4-208ENST00000439029 SMCO3A2RU48 225 aa6.29□□□□□ -1.4
SMPD4-208ENST00000439029 C9JCJ5 164 aa6.29□□□□□ -1.4
SMPD4-208ENST00000439029 RGS13O14921 159 aa6.29□□□□□ -1.4
SMPD4-208ENST00000439029 IL5P05113 134 aa6.29□□□□□ -1.4
SMPD4-208ENST00000439029 SLC25A5P05141 298 aaKnown RBP6.29□□□□□ -1.4
SMPD4-208ENST00000439029 S100A7P31151 101 aa6.29□□□□□ -1.4
SMPD4-208ENST00000439029 TDRG1Q3Y452 100 aa6.29□□□□□ -1.4
SMPD4-208ENST00000439029 OR10P1Q8NGE3 313 aa6.29□□□□□ -1.4
SMPD4-208ENST00000439029 DNAJC30Q96LL9 226 aa6.29□□□□□ -1.4
SMPD4-208ENST00000439029 CNBD2Q96M20 576 aa6.29□□□□□ -1.4
SMPD4-208ENST00000439029 RTBDNQ9BSG5 229 aaPredicted RBP6.29□□□□□ -1.4
SMPD4-208ENST00000439029 RNF222A6NCQ9 220 aa6.28□□□□□ -1.4
SMPD4-208ENST00000439029 MPDU1O75352 247 aa6.28□□□□□ -1.4
SMPD4-208ENST00000439029 B3GALNT1O75752 331 aa6.28□□□□□ -1.4
SMPD4-208ENST00000439029 LINC00869P0C866 280 aa6.28□□□□□ -1.4
SMPD4-208ENST00000439029 SMCO1Q147U7 214 aa6.28□□□□□ -1.4
SMPD4-208ENST00000439029 LCN15Q6UWW0 184 aa6.28□□□□□ -1.4
SMPD4-208ENST00000439029 CYP2G1PQ6ZSU1 146 aa6.28□□□□□ -1.4
SMPD4-208ENST00000439029 Q8N976 141 aa6.28□□□□□ -1.4
SMPD4-208ENST00000439029 TERB2Q8NHR7 220 aa6.28□□□□□ -1.4
SMPD4-208ENST00000439029 ARPC5LQ9BPX5 153 aa6.28□□□□□ -1.4
SMPD4-208ENST00000439029 PAXXQ9BUH6 204 aa6.28□□□□□ -1.4
SMPD4-208ENST00000439029 C14orf166Q9Y224 244 aaKnown RBP6.28□□□□□ -1.4
SMPD4-208ENST00000439029 PRSS46E5RG02 174 aa6.27□□□□□ -1.41
SMPD4-208ENST00000439029 CCR6P51684 374 aa6.27□□□□□ -1.41
SMPD4-208ENST00000439029 ATP5IP56385 69 aaPredicted RBP6.27□□□□□ -1.41
SMPD4-208ENST00000439029 LAGE3Q14657 143 aa6.27□□□□□ -1.41
SMPD4-208ENST00000439029 IBA57Q5T440 356 aaKnown RBP6.27□□□□□ -1.41
SMPD4-208ENST00000439029 PRR9Q5T870 116 aa6.27□□□□□ -1.41
SMPD4-208ENST00000439029 FAAP20Q6NZ36 180 aa6.27□□□□□ -1.41
SMPD4-208ENST00000439029 PATE2Q6UY27 113 aa6.27□□□□□ -1.41
SMPD4-208ENST00000439029 LYZL2Q7Z4W2 148 aa6.27□□□□□ -1.41
SMPD4-208ENST00000439029 DAZ4Q86SG3 579 aaKnown RBP6.27□□□□□ -1.41
SMPD4-208ENST00000439029 IQCF2Q8IXL9 164 aa6.27□□□□□ -1.41
SMPD4-208ENST00000439029 LINC00477Q96M19 166 aa6.27□□□□□ -1.41
SMPD4-208ENST00000439029 ODF3Q96PU9 254 aa6.27□□□□□ -1.41
SMPD4-208ENST00000439029 SLC50A1Q9BRV3 221 aa6.27□□□□□ -1.41
SMPD4-208ENST00000439029 ARL6Q9H0F7 186 aa6.27□□□□□ -1.41
SMPD4-208ENST00000439029 DAZ3Q9NR90 486 aaKnown RBP6.27□□□□□ -1.41
SMPD4-208ENST00000439029 IGHV1OR15-1A0A075B7D0 117 aa6.26□□□□□ -1.41
SMPD4-208ENST00000439029 TRAV8-3A0A0A6YYJ7 113 aa6.26□□□□□ -1.41
SMPD4-208ENST00000439029 SMIM31A0A1B0GVY4 71 aa6.26□□□□□ -1.41
SMPD4-208ENST00000439029 KLLNB2CW77 178 aa6.26□□□□□ -1.41
SMPD4-208ENST00000439029 H3BQ15 152 aa6.26□□□□□ -1.41
SMPD4-208ENST00000439029 PANO1I0J062 215 aa6.26□□□□□ -1.41
SMPD4-208ENST00000439029 GPX1P07203 203 aa6.26□□□□□ -1.41
SMPD4-208ENST00000439029 OR4E1P0C645 316 aa6.26□□□□□ -1.41
SMPD4-208ENST00000439029 RPS19P39019 145 aaKnown RBP6.26□□□□□ -1.41
SMPD4-208ENST00000439029 TIRAPP58753 221 aa6.26□□□□□ -1.41
SMPD4-208ENST00000439029 MUC21Q5SSG8 566 aa6.26□□□□□ -1.41
SMPD4-208ENST00000439029 OR10G4Q8NGN3 311 aa6.26□□□□□ -1.41
SMPD4-208ENST00000439029 NRG4Q8WWG1 115 aa6.26□□□□□ -1.41
SMPD4-208ENST00000439029 ARV1Q9H2C2 271 aa6.26□□□□□ -1.41
SMPD4-208ENST00000439029 COMMD3Q9UBI1 195 aa6.26□□□□□ -1.41
SMPD4-208ENST00000439029 BLOC1S6Q9UL45 172 aa6.26□□□□□ -1.41
SMPD4-208ENST00000439029 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.26□□□□□ -1.41
SMPD4-208ENST00000439029 MUC2Q02817 5179 aa6.25□□□□□ -1.41
SMPD4-208ENST00000439029 IGKV2D-24A0A075B6R9 120 aa6.25□□□□□ -1.41
SMPD4-208ENST00000439029 H3BP45 60 aa6.25□□□□□ -1.41
SMPD4-208ENST00000439029 M0R3E3 92 aa6.25□□□□□ -1.41
SMPD4-208ENST00000439029 CXCL2P19875 107 aa6.25□□□□□ -1.41
SMPD4-208ENST00000439029 OPCMLQ14982 345 aa6.25□□□□□ -1.41
SMPD4-208ENST00000439029 OR52I2Q8NH67 350 aa6.25□□□□□ -1.41
SMPD4-208ENST00000439029 ATP6V0E2Q8NHE4 81 aa6.25□□□□□ -1.41
SMPD4-208ENST00000439029 CACFD1Q9UGQ2 172 aa6.25□□□□□ -1.41
SMPD4-208ENST00000439029 WRBO00258 174 aa6.24□□□□□ -1.41
SMPD4-208ENST00000439029 RAB3DO95716 219 aa6.24□□□□□ -1.41
SMPD4-208ENST00000439029 AKR1C4P17516 323 aa6.24□□□□□ -1.41
SMPD4-208ENST00000439029 LSM3P62310 102 aaKnown RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms