RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 ZNF726P1Q15940 193 aa10.97□□□□□ -0.65
GARNL3-204ENST00000429629 IGFL4Q6B9Z1 124 aa10.97□□□□□ -0.65
GARNL3-204ENST00000429629 BLNKQ8WV28 456 aa10.97□□□□□ -0.65
GARNL3-204ENST00000429629 MBD3L1Q8WWY6 194 aa10.97□□□□□ -0.65
GARNL3-204ENST00000429629 PHYHIPLQ96FC7 376 aa10.97□□□□□ -0.65
GARNL3-204ENST00000429629 ASCL2Q99929 193 aa10.97□□□□□ -0.65
GARNL3-204ENST00000429629 H3BTX0 84 aa10.96□□□□□ -0.65
GARNL3-204ENST00000429629 AMBPP02760 352 aa10.96□□□□□ -0.65
GARNL3-204ENST00000429629 SNRPCP09234 159 aaKnown RBP10.96□□□□□ -0.65
GARNL3-204ENST00000429629 GIG44P09565 113 aaPredicted RBP10.96□□□□□ -0.65
GARNL3-204ENST00000429629 ARL14EPLP0DKL9 152 aa10.96□□□□□ -0.65
GARNL3-204ENST00000429629 GCHFRP30047 84 aa10.96□□□□□ -0.65
GARNL3-204ENST00000429629 FAM74A1Q5RGS3 127 aa10.96□□□□□ -0.65
GARNL3-204ENST00000429629 GDF5OSQ5U4N7 250 aa10.96□□□□□ -0.65
GARNL3-204ENST00000429629 RXFP4Q8TDU9 374 aa10.96□□□□□ -0.65
GARNL3-204ENST00000429629 RNF183Q96D59 192 aa10.96□□□□□ -0.65
GARNL3-204ENST00000429629 PLA2G2EQ9NZK7 142 aa10.96□□□□□ -0.65
GARNL3-204ENST00000429629 F6UB75 175 aa10.95□□□□□ -0.66
GARNL3-204ENST00000429629 HLA-DMBP28068 263 aa10.95□□□□□ -0.66
GARNL3-204ENST00000429629 CNN1P51911 297 aaKnown RBP10.95□□□□□ -0.66
GARNL3-204ENST00000429629 RANP62826 216 aaKnown RBP10.95□□□□□ -0.66
GARNL3-204ENST00000429629 AMTNQ6UX39 209 aa10.95□□□□□ -0.66
GARNL3-204ENST00000429629 OR10J6PQ8NGY7 276 aa10.95□□□□□ -0.66
GARNL3-204ENST00000429629 TMED6Q8WW62 240 aa10.95□□□□□ -0.66
GARNL3-204ENST00000429629 ODF3Q96PU9 254 aa10.95□□□□□ -0.66
GARNL3-204ENST00000429629 NKX6-2Q9C056 277 aaPredicted RBP10.95□□□□□ -0.66
GARNL3-204ENST00000429629 OTORQ9NRC9 128 aa10.95□□□□□ -0.66
GARNL3-204ENST00000429629 A0A1W2PRE2 83 aa10.94□□□□□ -0.66
GARNL3-204ENST00000429629 SLC25A5P05141 298 aaKnown RBP10.94□□□□□ -0.66
GARNL3-204ENST00000429629 CSN1S1P47710 185 aa10.94□□□□□ -0.66
GARNL3-204ENST00000429629 ICAM4Q14773 271 aa10.94□□□□□ -0.66
GARNL3-204ENST00000429629 OR4B1Q8NGF8 309 aa10.94□□□□□ -0.66
GARNL3-204ENST00000429629 LINC00477Q96M19 166 aa10.94□□□□□ -0.66
GARNL3-204ENST00000429629 OVOL2Q9BRP0 275 aa10.94□□□□□ -0.66
GARNL3-204ENST00000429629 Q9H3A6 140 aa10.94□□□□□ -0.66
GARNL3-204ENST00000429629 U3KQK5 164 aa10.94□□□□□ -0.66
GARNL3-204ENST00000429629 TRAV1-1A0A0B4J248 108 aa10.93□□□□□ -0.66
GARNL3-204ENST00000429629 TRBV7-9A0A0J9YWB2 115 aa10.93□□□□□ -0.66
GARNL3-204ENST00000429629 RBAKDNA6NC62 111 aa10.93□□□□□ -0.66
GARNL3-204ENST00000429629 ZNF705FA8MVS1 300 aaPredicted RBP10.93□□□□□ -0.66
GARNL3-204ENST00000429629 NPIPB6E9PJ23 425 aa10.93□□□□□ -0.66
GARNL3-204ENST00000429629 HMGB3O15347 200 aaKnown RBP10.93□□□□□ -0.66
GARNL3-204ENST00000429629 SPRY2O43597 315 aa10.93□□□□□ -0.66
GARNL3-204ENST00000429629 CA1P00915 261 aaPredicted RBP10.93□□□□□ -0.66
GARNL3-204ENST00000429629 SULT1A2P50226 295 aa10.93□□□□□ -0.66
GARNL3-204ENST00000429629 DEFB1P60022 68 aa10.93□□□□□ -0.66
GARNL3-204ENST00000429629 C9orf47Q6ZRZ4 202 aa10.93□□□□□ -0.66
GARNL3-204ENST00000429629 SSX7Q7RTT5 188 aa10.93□□□□□ -0.66
GARNL3-204ENST00000429629 EXOC3-AS1Q8N2X6 119 aa10.93□□□□□ -0.66
GARNL3-204ENST00000429629 CSNK1G2-AS1Q8NCQ2 148 aa10.93□□□□□ -0.66
GARNL3-204ENST00000429629 RCHY1Q96PM5 261 aa10.93□□□□□ -0.66
GARNL3-204ENST00000429629 PPP1R14DQ9NXH3 145 aa10.93□□□□□ -0.66
GARNL3-204ENST00000429629 ARL2-SNX15V9GYD0 113 aa10.93□□□□□ -0.66
GARNL3-204ENST00000429629 MAP1LC3B2A6NCE7 125 aa10.92□□□□□ -0.66
GARNL3-204ENST00000429629 PGPA6NDG6 321 aa10.92□□□□□ -0.66
GARNL3-204ENST00000429629 PRAC2D3DTV9 90 aa10.92□□□□□ -0.66
GARNL3-204ENST00000429629 M0R3E3 92 aa10.92□□□□□ -0.66
GARNL3-204ENST00000429629 NMBP08949 121 aa10.92□□□□□ -0.66
GARNL3-204ENST00000429629 HIST1H1AQ02539 215 aaPredicted RBP10.92□□□□□ -0.66
GARNL3-204ENST00000429629 MAP1LC3BQ9GZQ8 125 aa10.92□□□□□ -0.66
GARNL3-204ENST00000429629 NBEAL2Q6ZNJ1 2754 aa10.91□□□□□ -0.66
GARNL3-204ENST00000429629 SERTM2A0A1B0GWG4 89 aa10.91□□□□□ -0.66
GARNL3-204ENST00000429629 EIF3GO75821 320 aaKnown RBP eCLIP10.91□□□□□ -0.66
GARNL3-204ENST00000429629 H2AFB1P0C5Y9 115 aa10.91□□□□□ -0.66
GARNL3-204ENST00000429629 TSPOP30536 169 aa10.91□□□□□ -0.66
GARNL3-204ENST00000429629 FHITP49789 147 aa10.91□□□□□ -0.66
GARNL3-204ENST00000429629 PPT1P50897 306 aa10.91□□□□□ -0.66
GARNL3-204ENST00000429629 PMS2P11Q13670 270 aa10.91□□□□□ -0.66
GARNL3-204ENST00000429629 FAM213BQ8TBF2 198 aa10.91□□□□□ -0.66
GARNL3-204ENST00000429629 SFT2D1Q8WV19 159 aa10.91□□□□□ -0.66
GARNL3-204ENST00000429629 TGP01266 2768 aa10.91□□□□□ -0.66
GARNL3-204ENST00000429629 ZNF705EA8MWA4 302 aaPredicted RBP10.9□□□□□ -0.66
GARNL3-204ENST00000429629 TEX46H3BTG2 121 aa10.9□□□□□ -0.66
GARNL3-204ENST00000429629 BOLA2-SMG1P6H3BVE0 249 aa10.9□□□□□ -0.66
GARNL3-204ENST00000429629 C5orf17Q8NAS9 161 aa10.9□□□□□ -0.66
GARNL3-204ENST00000429629 CMTM2Q8TAZ6 248 aa10.9□□□□□ -0.66
GARNL3-204ENST00000429629 IGF2BP2-AS1Q96M15 143 aa10.9□□□□□ -0.66
GARNL3-204ENST00000429629 TCEAL7Q9BRU2 100 aa10.9□□□□□ -0.66
GARNL3-204ENST00000429629 LENEPQ9Y5L5 61 aa10.9□□□□□ -0.66
GARNL3-204ENST00000429629 HUWE1Q7Z6Z7 4374 aaKnown RBP10.89□□□□□ -0.67
GARNL3-204ENST00000429629 COL7A1Q02388 2944 aa10.89□□□□□ -0.67
GARNL3-204ENST00000429629 FBLL1A6NHQ2 334 aaKnown RBP10.89□□□□□ -0.67
GARNL3-204ENST00000429629 DIRC3C9JPN6 131 aa10.89□□□□□ -0.67
GARNL3-204ENST00000429629 IGKV3-20P01619 116 aa10.89□□□□□ -0.67
GARNL3-204ENST00000429629 ZNF705DP0CH99 300 aaPredicted RBP10.89□□□□□ -0.67
GARNL3-204ENST00000429629 ZNF705BP0CI00 300 aaPredicted RBP10.89□□□□□ -0.67
GARNL3-204ENST00000429629 NKX2-5P52952 324 aaPredicted RBP10.89□□□□□ -0.67
GARNL3-204ENST00000429629 DEFB135Q30KP9 77 aa10.89□□□□□ -0.67
GARNL3-204ENST00000429629 FAM19A4Q96LR4 140 aa10.89□□□□□ -0.67
GARNL3-204ENST00000429629 NEU1Q99519 415 aa10.89□□□□□ -0.67
GARNL3-204ENST00000429629 C20orf144Q9BQM9 153 aa10.89□□□□□ -0.67
GARNL3-204ENST00000429629 AGPAT4-IT1Q9H0P7 198 aa10.89□□□□□ -0.67
GARNL3-204ENST00000429629 SLC35B3Q9H1N7 401 aa10.89□□□□□ -0.67
GARNL3-204ENST00000429629 SMIM9A6NGZ8 99 aa10.88□□□□□ -0.67
GARNL3-204ENST00000429629 HBE1P02100 147 aa10.88□□□□□ -0.67
GARNL3-204ENST00000429629 CT45A10P0DMU9 189 aa10.88□□□□□ -0.67
GARNL3-204ENST00000429629 CRISP2P16562 243 aa10.88□□□□□ -0.67
GARNL3-204ENST00000429629 CDKN1BP46527 198 aa10.88□□□□□ -0.67
GARNL3-204ENST00000429629 SUMO1P63165 101 aaKnown RBP10.88□□□□□ -0.67
GARNL3-204ENST00000429629 TMEM78Q5T7P6 136 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 1408.3 ms