RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 C9orf139Q6ZV77 190 aa16.73■□□□□ 0.27
CNEP1R1-202ENST00000427478 CHD6Q8TD26 2715 aa16.73■□□□□ 0.27
CNEP1R1-202ENST00000427478 NBPF19A0A087WUL8 3843 aa16.73■□□□□ 0.27
CNEP1R1-202ENST00000427478 C1orf194Q5T5A4 169 aa16.73■□□□□ 0.27
CNEP1R1-202ENST00000427478 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.73■□□□□ 0.27
CNEP1R1-202ENST00000427478 TCF24Q7RTU0 167 aa16.73■□□□□ 0.27
CNEP1R1-202ENST00000427478 OR4X2Q8NGF9 303 aa16.73■□□□□ 0.27
CNEP1R1-202ENST00000427478 VPREB3Q9UKI3 123 aa16.73■□□□□ 0.27
CNEP1R1-202ENST00000427478 SERTM2A0A1B0GWG4 89 aa16.72■□□□□ 0.27
CNEP1R1-202ENST00000427478 IGHG4P01861 327 aa16.72■□□□□ 0.27
CNEP1R1-202ENST00000427478 UNQ9165/PRO28630Q6UXU0 137 aa16.72■□□□□ 0.27
CNEP1R1-202ENST00000427478 Q6YL49 198 aa16.72■□□□□ 0.27
CNEP1R1-202ENST00000427478 PSMG3-AS1Q96PY0 264 aa16.72■□□□□ 0.27
CNEP1R1-202ENST00000427478 U3KQE9 123 aa16.72■□□□□ 0.27
CNEP1R1-202ENST00000427478 ZNF705FA8MVS1 300 aaPredicted RBP16.72■□□□□ 0.27
CNEP1R1-202ENST00000427478 CT83Q5H943 113 aa16.72■□□□□ 0.27
CNEP1R1-202ENST00000427478 OR10D4PQ8NGN7 298 aa16.72■□□□□ 0.27
CNEP1R1-202ENST00000427478 C8orf49Q96NF6 230 aa16.72■□□□□ 0.27
CNEP1R1-202ENST00000427478 GRIFINA4D1Z8 144 aa16.71■□□□□ 0.27
CNEP1R1-202ENST00000427478 A8MWL6 223 aa16.71■□□□□ 0.27
CNEP1R1-202ENST00000427478 MT-ND6P03923 174 aa16.71■□□□□ 0.27
CNEP1R1-202ENST00000427478 COX19Q49B96 90 aa16.71■□□□□ 0.27
CNEP1R1-202ENST00000427478 HIST1H2BLQ99880 126 aa16.71■□□□□ 0.27
CNEP1R1-202ENST00000427478 ZNF580Q9UK33 172 aa16.71■□□□□ 0.27
CNEP1R1-202ENST00000427478 A0A0G2JLM5 398 aa16.7■□□□□ 0.26
CNEP1R1-202ENST00000427478 A0A1B0GUS0 222 aa16.7■□□□□ 0.26
CNEP1R1-202ENST00000427478 NPIPB6E9PJ23 425 aa16.7■□□□□ 0.26
CNEP1R1-202ENST00000427478 NDUFA4O00483 81 aa16.7■□□□□ 0.26
CNEP1R1-202ENST00000427478 WFDC11Q8NEX6 87 aa16.7■□□□□ 0.26
CNEP1R1-202ENST00000427478 RNF182Q8N6D2 247 aa16.7■□□□□ 0.26
CNEP1R1-202ENST00000427478 ARL6IP6Q8N6S5 226 aa16.7■□□□□ 0.26
CNEP1R1-202ENST00000427478 GTSF1Q8WW33 167 aa16.7■□□□□ 0.26
CNEP1R1-202ENST00000427478 HOXA3O43365 443 aaPredicted RBP16.69■□□□□ 0.26
CNEP1R1-202ENST00000427478 LCN12Q6JVE5 192 aa16.69■□□□□ 0.26
CNEP1R1-202ENST00000427478 HLA-DQA1P01909 254 aa16.69■□□□□ 0.26
CNEP1R1-202ENST00000427478 OR2D3Q8NGH3 330 aa16.69■□□□□ 0.26
CNEP1R1-202ENST00000427478 SLC50A1Q9BRV3 221 aa16.69■□□□□ 0.26
CNEP1R1-202ENST00000427478 GZMBP10144 247 aa16.68■□□□□ 0.26
CNEP1R1-202ENST00000427478 C10orf99Q6UWK7 81 aa16.68■□□□□ 0.26
CNEP1R1-202ENST00000427478 OR4B1Q8NGF8 309 aa16.68■□□□□ 0.26
CNEP1R1-202ENST00000427478 Q8TAT8 98 aa16.68■□□□□ 0.26
CNEP1R1-202ENST00000427478 VGLL1Q99990 258 aa16.68■□□□□ 0.26
CNEP1R1-202ENST00000427478 CRIP1P50238 77 aa16.67■□□□□ 0.26
CNEP1R1-202ENST00000427478 KIAA1644Q3SXP7 199 aa16.67■□□□□ 0.26
CNEP1R1-202ENST00000427478 C16orf54Q6UWD8 224 aa16.67■□□□□ 0.26
CNEP1R1-202ENST00000427478 WIPF2Q8TF74 440 aaPredicted RBP16.67■□□□□ 0.26
CNEP1R1-202ENST00000427478 PACRGQ96M98 296 aaPredicted RBP16.67■□□□□ 0.26
CNEP1R1-202ENST00000427478 PCP4L1A6NKN8 68 aa16.67■□□□□ 0.26
CNEP1R1-202ENST00000427478 AMBPP02760 352 aa16.67■□□□□ 0.26
CNEP1R1-202ENST00000427478 CRISP2P16562 243 aa16.67■□□□□ 0.26
CNEP1R1-202ENST00000427478 PSMB8P28062 276 aa16.67■□□□□ 0.26
CNEP1R1-202ENST00000427478 RASL11AQ6T310 242 aa16.67■□□□□ 0.26
CNEP1R1-202ENST00000427478 PGLYRP4Q96LB8 373 aa16.67■□□□□ 0.26
CNEP1R1-202ENST00000427478 SMAD7O15105 426 aaKnown RBP16.66■□□□□ 0.26
CNEP1R1-202ENST00000427478 CT45A10P0DMU9 189 aa16.66■□□□□ 0.26
CNEP1R1-202ENST00000427478 GDF5OSQ5U4N7 250 aa16.66■□□□□ 0.26
CNEP1R1-202ENST00000427478 C8orf86Q6ZUL3 223 aa16.66■□□□□ 0.26
CNEP1R1-202ENST00000427478 TMEM256Q8N2U0 113 aa16.66■□□□□ 0.26
CNEP1R1-202ENST00000427478 GLMPQ8WWB7 406 aa16.66■□□□□ 0.26
CNEP1R1-202ENST00000427478 GFRA4Q9GZZ7 299 aa16.66■□□□□ 0.26
CNEP1R1-202ENST00000427478 PRAC2D3DTV9 90 aa16.66■□□□□ 0.26
CNEP1R1-202ENST00000427478 CAMPP49913 170 aa16.66■□□□□ 0.26
CNEP1R1-202ENST00000427478 TRAV8-2A0A0B4J237 113 aa16.65■□□□□ 0.26
CNEP1R1-202ENST00000427478 PYY3Q5JQD4 70 aa16.65■□□□□ 0.26
CNEP1R1-202ENST00000427478 IL17RELQ6ZVW7 336 aa16.65■□□□□ 0.26
CNEP1R1-202ENST00000427478 ATP5L2Q7Z4Y8 100 aa16.65■□□□□ 0.26
CNEP1R1-202ENST00000427478 PRR25Q96S07 402 aa16.65■□□□□ 0.26
CNEP1R1-202ENST00000427478 NPFFR1Q9GZQ6 430 aa16.65■□□□□ 0.26
CNEP1R1-202ENST00000427478 APCSP02743 223 aa16.64■□□□□ 0.25
CNEP1R1-202ENST00000427478 SLAQ13239 276 aa16.64■□□□□ 0.25
CNEP1R1-202ENST00000427478 FAM209BQ5JX69 171 aa16.64■□□□□ 0.25
CNEP1R1-202ENST00000427478 RBPMS2Q6ZRY4 209 aaKnown RBP16.64■□□□□ 0.25
CNEP1R1-202ENST00000427478 A0A1B0GXF2 115 aa16.64■□□□□ 0.25
CNEP1R1-202ENST00000427478 FBLL1A6NHQ2 334 aaKnown RBP16.64■□□□□ 0.25
CNEP1R1-202ENST00000427478 ERCC8Q13216 396 aa16.64■□□□□ 0.25
CNEP1R1-202ENST00000427478 SAPCD1Q5SSQ6 148 aa16.64■□□□□ 0.25
CNEP1R1-202ENST00000427478 ZNF702PQ9H963 129 aa16.64■□□□□ 0.25
CNEP1R1-202ENST00000427478 NIT2Q9NQR4 276 aa16.64■□□□□ 0.25
CNEP1R1-202ENST00000427478 TP53TG3Q9ULZ0 132 aa16.64■□□□□ 0.25
CNEP1R1-202ENST00000427478 ZNF469Q96JG9 3925 aaPredicted RBP16.64■□□□□ 0.25
CNEP1R1-202ENST00000427478 DUX5Q96PT3 197 aa16.63■□□□□ 0.25
CNEP1R1-202ENST00000427478 PEF1Q9UBV8 284 aaKnown RBP16.63■□□□□ 0.25
CNEP1R1-202ENST00000427478 NUPR1O60356 82 aa16.63■□□□□ 0.25
CNEP1R1-202ENST00000427478 PRDM13Q9H4Q3 707 aa16.63■□□□□ 0.25
CNEP1R1-202ENST00000427478 FAM231BA6NCW3 169 aa16.62■□□□□ 0.25
CNEP1R1-202ENST00000427478 F2Z2F3 143 aa16.62■□□□□ 0.25
CNEP1R1-202ENST00000427478 SH2D1AO60880 128 aa16.62■□□□□ 0.25
CNEP1R1-202ENST00000427478 HBBP68871 147 aa16.62■□□□□ 0.25
CNEP1R1-202ENST00000427478 SSBP4Q9BWG4 385 aaPredicted RBP16.62■□□□□ 0.25
CNEP1R1-202ENST00000427478 CREBBPQ92793 2442 aa16.62■□□□□ 0.25
CNEP1R1-202ENST00000427478 TEX15Q9BXT5 2789 aa16.62■□□□□ 0.25
CNEP1R1-202ENST00000427478 SRIP30626 198 aa16.61■□□□□ 0.25
CNEP1R1-202ENST00000427478 PRR31Q5SQ13 230 aa16.61■□□□□ 0.25
CNEP1R1-202ENST00000427478 FAM162BQ5T6X4 162 aa16.61■□□□□ 0.25
CNEP1R1-202ENST00000427478 BAGE3Q86Y29 109 aa16.61■□□□□ 0.25
CNEP1R1-202ENST00000427478 SIGLECL1Q8N7X8 197 aa16.61■□□□□ 0.25
CNEP1R1-202ENST00000427478 TMEM18Q96B42 140 aa16.61■□□□□ 0.25
CNEP1R1-202ENST00000427478 C16orf92Q96LL3 132 aa16.61■□□□□ 0.25
CNEP1R1-202ENST00000427478 RPLP1P05386 114 aaKnown RBP16.6■□□□□ 0.25
CNEP1R1-202ENST00000427478 LINC00310P59036 64 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms