RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 PCNX1Q96RV3 2341 aa9.52□□□□□ -0.89
PTPRF-205ENST00000414879 IGHV7-4-1A0A0J9YVY3 117 aa9.52□□□□□ -0.89
PTPRF-205ENST00000414879 MST1LQ2TV78 715 aa9.52□□□□□ -0.89
PTPRF-205ENST00000414879 SPTAN1Q13813 2472 aaKnown RBP9.51□□□□□ -0.89
PTPRF-205ENST00000414879 TRAV9-2A0A087WT02 112 aa9.51□□□□□ -0.89
PTPRF-205ENST00000414879 G3V318 75 aa9.51□□□□□ -0.89
PTPRF-205ENST00000414879 TMEM86BQ8N661 226 aa9.51□□□□□ -0.89
PTPRF-205ENST00000414879 SSBP4Q9BWG4 385 aaPredicted RBP9.51□□□□□ -0.89
PTPRF-205ENST00000414879 LINC00574Q9H8X3 128 aa9.51□□□□□ -0.89
PTPRF-205ENST00000414879 RBAKDNA6NC62 111 aa9.51□□□□□ -0.89
PTPRF-205ENST00000414879 RPL24P83731 157 aaKnown RBP9.51□□□□□ -0.89
PTPRF-205ENST00000414879 IL17RELQ6ZVW7 336 aa9.51□□□□□ -0.89
PTPRF-205ENST00000414879 MUC21A0A0G2JKD1 596 aa9.51□□□□□ -0.89
PTPRF-205ENST00000414879 MUC21A0A140T8X8 626 aa9.51□□□□□ -0.89
PTPRF-205ENST00000414879 PRSS46E5RG02 174 aa9.51□□□□□ -0.89
PTPRF-205ENST00000414879 EMP1P54849 157 aa9.51□□□□□ -0.89
PTPRF-205ENST00000414879 TSSC4Q9Y5U2 329 aaPredicted RBP9.51□□□□□ -0.89
PTPRF-205ENST00000414879 MALRD1Q5VYJ5 2156 aa9.5□□□□□ -0.89
PTPRF-205ENST00000414879 CADP27708 2225 aa9.5□□□□□ -0.89
PTPRF-205ENST00000414879 TRAV12-3A0A0B4J271 114 aa9.5□□□□□ -0.89
PTPRF-205ENST00000414879 IGHV4-61A0A0C4DH41 118 aa9.5□□□□□ -0.89
PTPRF-205ENST00000414879 DEFB131AP59861 70 aa9.5□□□□□ -0.89
PTPRF-205ENST00000414879 DERL1Q9BUN8 251 aa9.5□□□□□ -0.89
PTPRF-205ENST00000414879 YLPM1P49750 1951 aaKnown RBP9.5□□□□□ -0.89
PTPRF-205ENST00000414879 TRAV8-6A0A0B4J262 113 aa9.5□□□□□ -0.89
PTPRF-205ENST00000414879 CRPP02741 224 aa9.5□□□□□ -0.89
PTPRF-205ENST00000414879 LGALS1P09382 135 aaKnown RBP9.5□□□□□ -0.89
PTPRF-205ENST00000414879 APOC4P55056 127 aa9.5□□□□□ -0.89
PTPRF-205ENST00000414879 C8orf86Q6ZUL3 223 aa9.5□□□□□ -0.89
PTPRF-205ENST00000414879 POLEQ07864 2286 aa9.5□□□□□ -0.89
PTPRF-205ENST00000414879 ADARB2-AS1A8MUL3 147 aa9.49□□□□□ -0.89
PTPRF-205ENST00000414879 A8MWV9 139 aa9.49□□□□□ -0.89
PTPRF-205ENST00000414879 CD28P10747 220 aa9.49□□□□□ -0.89
PTPRF-205ENST00000414879 IGLV1-47P01700 117 aa9.49□□□□□ -0.89
PTPRF-205ENST00000414879 TRPT1Q86TN4 253 aaKnown RBP9.49□□□□□ -0.89
PTPRF-205ENST00000414879 CHTOPQ9Y3Y2 248 aaKnown RBP9.49□□□□□ -0.89
PTPRF-205ENST00000414879 DEFB112Q30KQ8 113 aa9.49□□□□□ -0.89
PTPRF-205ENST00000414879 TCTEX1D4Q5JR98 221 aa9.49□□□□□ -0.89
PTPRF-205ENST00000414879 SPXQ9BT56 116 aa9.49□□□□□ -0.89
PTPRF-205ENST00000414879 LOC107984156A0A0G2JMH3 177 aa9.49□□□□□ -0.89
PTPRF-205ENST00000414879 HTN3P15516 51 aa9.49□□□□□ -0.89
PTPRF-205ENST00000414879 ARL17AQ8IVW1 177 aa9.49□□□□□ -0.89
PTPRF-205ENST00000414879 ZNF491Q8N8L2 437 aa9.49□□□□□ -0.89
PTPRF-205ENST00000414879 TRGV1A0A0A0MS02 117 aa9.48□□□□□ -0.89
PTPRF-205ENST00000414879 IGKCP01834 107 aa9.48□□□□□ -0.89
PTPRF-205ENST00000414879 RNF182Q8N6D2 247 aa9.48□□□□□ -0.89
PTPRF-205ENST00000414879 PLEKHB2Q96CS7 222 aa9.48□□□□□ -0.89
PTPRF-205ENST00000414879 LSM4Q9Y4Z0 139 aaKnown RBP9.48□□□□□ -0.89
PTPRF-205ENST00000414879 RBMY1BA6NDE4 496 aaKnown RBP9.48□□□□□ -0.89
PTPRF-205ENST00000414879 RBMY1EA6NEQ0 496 aaKnown RBP9.48□□□□□ -0.89
PTPRF-205ENST00000414879 D6R8Y8 96 aa9.48□□□□□ -0.89
PTPRF-205ENST00000414879 RBMY1DP0C7P1 496 aaKnown RBP9.48□□□□□ -0.89
PTPRF-205ENST00000414879 RBMY1A1P0DJD3 496 aaKnown RBP9.48□□□□□ -0.89
PTPRF-205ENST00000414879 RBMY1CP0DJD4 496 aa9.48□□□□□ -0.89
PTPRF-205ENST00000414879 MALP21145 153 aa9.48□□□□□ -0.89
PTPRF-205ENST00000414879 PLP1P60201 277 aa9.48□□□□□ -0.89
PTPRF-205ENST00000414879 MORN3Q6PF18 240 aaPredicted RBP9.48□□□□□ -0.89
PTPRF-205ENST00000414879 CHCHD5Q9BSY4 110 aa9.48□□□□□ -0.89
PTPRF-205ENST00000414879 HOXA3O43365 443 aaPredicted RBP9.48□□□□□ -0.89
PTPRF-205ENST00000414879 DNAL4O96015 105 aa9.48□□□□□ -0.89
PTPRF-205ENST00000414879 PLNP26678 52 aa9.48□□□□□ -0.89
PTPRF-205ENST00000414879 PPIFP30405 207 aaKnown RBP9.48□□□□□ -0.89
PTPRF-205ENST00000414879 NUP210LQ5VU65 1888 aa9.48□□□□□ -0.89
PTPRF-205ENST00000414879 FAM19A2Q8N3H0 131 aa9.48□□□□□ -0.89
PTPRF-205ENST00000414879 RNF152Q8N8N0 203 aa9.48□□□□□ -0.89
PTPRF-205ENST00000414879 OR9G4Q8NGQ1 327 aa9.48□□□□□ -0.89
PTPRF-205ENST00000414879 PRR25Q96S07 402 aa9.48□□□□□ -0.89
PTPRF-205ENST00000414879 TPSG1Q9NRR2 321 aa9.48□□□□□ -0.89
PTPRF-205ENST00000414879 IGKV3OR2-268A0A0C4DH90 116 aa9.48□□□□□ -0.89
PTPRF-205ENST00000414879 CA1P00915 261 aaPredicted RBP9.48□□□□□ -0.89
PTPRF-205ENST00000414879 TYMSP04818 313 aa9.48□□□□□ -0.89
PTPRF-205ENST00000414879 CDKN1BP46527 198 aa9.48□□□□□ -0.89
PTPRF-205ENST00000414879 LOXL1Q08397 574 aaPredicted RBP9.48□□□□□ -0.89
PTPRF-205ENST00000414879 CXCL1P09341 107 aa9.47□□□□□ -0.89
PTPRF-205ENST00000414879 Q0VG73 95 aa9.47□□□□□ -0.89
PTPRF-205ENST00000414879 HAPLN4Q86UW8 402 aa9.47□□□□□ -0.89
PTPRF-205ENST00000414879 Q8TAT8 98 aa9.47□□□□□ -0.89
PTPRF-205ENST00000414879 OTOGLQ3ZCN5 2332 aa9.47□□□□□ -0.89
PTPRF-205ENST00000414879 WNK2Q9Y3S1 2297 aa9.47□□□□□ -0.89
PTPRF-205ENST00000414879 IGHV4-30-2A0A087WSY4 118 aa9.47□□□□□ -0.89
PTPRF-205ENST00000414879 A0A087WX48 190 aa9.47□□□□□ -0.89
PTPRF-205ENST00000414879 ZNF876PQ49A33 203 aa9.47□□□□□ -0.89
PTPRF-205ENST00000414879 IGHV1OR15-1A0A075B7D0 117 aa9.47□□□□□ -0.89
PTPRF-205ENST00000414879 FOXI2Q6ZQN5 318 aa9.47□□□□□ -0.89
PTPRF-205ENST00000414879 ZNF48Q96MX3 618 aaPredicted RBP9.47□□□□□ -0.89
PTPRF-205ENST00000414879 NDUFS7O75251 213 aa9.46□□□□□ -0.89
PTPRF-205ENST00000414879 NDUFA3O95167 84 aa9.46□□□□□ -0.89
PTPRF-205ENST00000414879 ARMS2P0C7Q2 107 aa9.46□□□□□ -0.89
PTPRF-205ENST00000414879 DIAPH2-AS1Q14236 149 aa9.46□□□□□ -0.89
PTPRF-205ENST00000414879 DMRTA1Q5VZB9 504 aa9.46□□□□□ -0.89
PTPRF-205ENST00000414879 HIST3H2BBQ8N257 126 aa9.46□□□□□ -0.89
PTPRF-205ENST00000414879 LYPD6BQ8NI32 183 aa9.46□□□□□ -0.89
PTPRF-205ENST00000414879 TRAV8-1A0A0A6YYK1 113 aa9.46□□□□□ -0.9
PTPRF-205ENST00000414879 CRYGCP07315 174 aa9.46□□□□□ -0.9
PTPRF-205ENST00000414879 C10orf91Q5T1B1 145 aa9.46□□□□□ -0.9
PTPRF-205ENST00000414879 TMEM256Q8N2U0 113 aa9.46□□□□□ -0.9
PTPRF-205ENST00000414879 OR5A1Q8NGJ0 315 aa9.46□□□□□ -0.9
PTPRF-205ENST00000414879 FXYD5Q96DB9 178 aa9.46□□□□□ -0.9
PTPRF-205ENST00000414879 IGLV11-55A0A075B6I3 123 aa9.46□□□□□ -0.9
PTPRF-205ENST00000414879 PRSS57Q6UWY2 283 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms