RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 NDUFB8O95169 186 aa11.11□□□□□ -0.63
VAPA-202ENST00000400000 FAM223AQ8IWN6 122 aa11.11□□□□□ -0.63
VAPA-202ENST00000400000 TNFRSF14Q92956 283 aa11.11□□□□□ -0.63
VAPA-202ENST00000400000 RPP25LQ8N5L8 163 aaKnown RBP11.11□□□□□ -0.63
VAPA-202ENST00000400000 ZNRF2Q8NHG8 242 aa11.11□□□□□ -0.63
VAPA-202ENST00000400000 TRGV9Q99603 122 aa11.11□□□□□ -0.63
VAPA-202ENST00000400000 SIPA1L1O43166 1804 aa11.11□□□□□ -0.63
VAPA-202ENST00000400000 IGKV1OR2-108A0A075B7D4 117 aa11.11□□□□□ -0.63
VAPA-202ENST00000400000 PPBPP02775 128 aa11.11□□□□□ -0.63
VAPA-202ENST00000400000 TEX36Q5VZQ5 186 aa11.11□□□□□ -0.63
VAPA-202ENST00000400000 Q6ZQT7 251 aa11.11□□□□□ -0.63
VAPA-202ENST00000400000 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.11□□□□□ -0.636e-7■■■□□ 16.2
VAPA-202ENST00000400000 A0A1B0GUS0 222 aa11.11□□□□□ -0.63
VAPA-202ENST00000400000 LIME1Q9H400 295 aa11.11□□□□□ -0.63
VAPA-202ENST00000400000 ESM1Q9NQ30 184 aa11.11□□□□□ -0.63
VAPA-202ENST00000400000 RS1O15537 224 aa11.1□□□□□ -0.63
VAPA-202ENST00000400000 SUPT4H1P63272 117 aaKnown RBP11.1□□□□□ -0.63
VAPA-202ENST00000400000 TCTEX1D4Q5JR98 221 aa11.1□□□□□ -0.63
VAPA-202ENST00000400000 NDUFS7O75251 213 aa11.1□□□□□ -0.63
VAPA-202ENST00000400000 USMG5Q96IX5 58 aa11.1□□□□□ -0.63
VAPA-202ENST00000400000 A0A0G2JMZ2 1700 aa11.1□□□□□ -0.63
VAPA-202ENST00000400000 LRRC37A2A6NM11 1700 aa11.1□□□□□ -0.63
VAPA-202ENST00000400000 GBF1Q92538 1859 aa11.1□□□□□ -0.63
VAPA-202ENST00000400000 SPOCK3Q9BQ16 436 aa11.09□□□□□ -0.63
VAPA-202ENST00000400000 ZSWIM8A7E2V4 1837 aa11.09□□□□□ -0.63
VAPA-202ENST00000400000 J3QRE1 110 aa11.09□□□□□ -0.63
VAPA-202ENST00000400000 GHRHP01286 108 aa11.09□□□□□ -0.63
VAPA-202ENST00000400000 GRNP28799 593 aaKnown RBP11.09□□□□□ -0.63
VAPA-202ENST00000400000 TPSG1Q9NRR2 321 aa11.09□□□□□ -0.63
VAPA-202ENST00000400000 TP53TG1Q9Y2A0 90 aa11.09□□□□□ -0.63
VAPA-202ENST00000400000 A0A1W2PPI3 338 aa11.09□□□□□ -0.63
VAPA-202ENST00000400000 TNFSF13O75888 250 aa11.09□□□□□ -0.63
VAPA-202ENST00000400000 DIAPH2-AS1Q14236 149 aa11.09□□□□□ -0.63
VAPA-202ENST00000400000 C9orf139Q6ZV77 190 aa11.09□□□□□ -0.63
VAPA-202ENST00000400000 HIST1H2BLQ99880 126 aa11.09□□□□□ -0.63
VAPA-202ENST00000400000 CMC4P56277 68 aaPredicted RBP11.09□□□□□ -0.63
VAPA-202ENST00000400000 C1QTNF4Q9BXJ3 329 aa11.09□□□□□ -0.63
VAPA-202ENST00000400000 TCF15Q12870 199 aa11.09□□□□□ -0.63
VAPA-202ENST00000400000 Q6ZS92 163 aa11.09□□□□□ -0.63
VAPA-202ENST00000400000 TRAV9-1A0A075B6T8 112 aa11.08□□□□□ -0.64
VAPA-202ENST00000400000 C9JAW5 83 aa11.08□□□□□ -0.64
VAPA-202ENST00000400000 SIGMAR1Q99720 223 aa11.08□□□□□ -0.64
VAPA-202ENST00000400000 UBE2E1P51965 193 aa11.08□□□□□ -0.64
VAPA-202ENST00000400000 ZMAT4Q9H898 229 aa11.08□□□□□ -0.64
VAPA-202ENST00000400000 B3GALT5-AS1P59052 145 aa11.08□□□□□ -0.64
VAPA-202ENST00000400000 ANGP03950 147 aaKnown RBP11.07□□□□□ -0.64
VAPA-202ENST00000400000 PLEKHB2Q96CS7 222 aa11.07□□□□□ -0.64
VAPA-202ENST00000400000 IGHV1-69DA0A0B4J2H0 117 aa11.07□□□□□ -0.64
VAPA-202ENST00000400000 IGHV1-69P01742 117 aa11.07□□□□□ -0.64
VAPA-202ENST00000400000 NEUROG3Q9Y4Z2 214 aa11.07□□□□□ -0.64
VAPA-202ENST00000400000 IGKV2D-24A0A075B6R9 120 aa11.07□□□□□ -0.64
VAPA-202ENST00000400000 C15orf62A8K5M9 175 aa11.07□□□□□ -0.64
VAPA-202ENST00000400000 AMBPP02760 352 aa11.07□□□□□ -0.64
VAPA-202ENST00000400000 RNASE2P10153 161 aaKnown RBP11.07□□□□□ -0.64
VAPA-202ENST00000400000 GAS1P54826 345 aa11.07□□□□□ -0.64
VAPA-202ENST00000400000 HSD52Q0P140 79 aa11.07□□□□□ -0.64
VAPA-202ENST00000400000 GTSF1LQ9H1H1 148 aa11.07□□□□□ -0.64
VAPA-202ENST00000400000 KLF12Q9Y4X4 402 aa11.07□□□□□ -0.64
VAPA-202ENST00000400000 HELZP42694 1942 aaKnown RBP11.07□□□□□ -0.64
VAPA-202ENST00000400000 LOC105371267A0A1B0GV96 52 aa11.07□□□□□ -0.64
VAPA-202ENST00000400000 MORN5Q5VZ52 161 aa11.07□□□□□ -0.64
VAPA-202ENST00000400000 LINC01551Q86U37 167 aa11.07□□□□□ -0.64
VAPA-202ENST00000400000 DTX1Q86Y01 620 aa11.07□□□□□ -0.64
VAPA-202ENST00000400000 PLXND1Q9Y4D7 1925 aa11.06□□□□□ -0.64
VAPA-202ENST00000400000 WISP1O95388 367 aa11.06□□□□□ -0.64
VAPA-202ENST00000400000 ARTNQ5T4W7 220 aa11.06□□□□□ -0.64
VAPA-202ENST00000400000 USF3Q68DE3 2245 aa11.06□□□□□ -0.64
VAPA-202ENST00000400000 TRBV25-1A0A075B6N4 114 aa11.06□□□□□ -0.64
VAPA-202ENST00000400000 MST1LQ2TV78 715 aa11.06□□□□□ -0.64
VAPA-202ENST00000400000 Q6ZRM9 215 aa11.06□□□□□ -0.64
VAPA-202ENST00000400000 NACAE9PAV3 2078 aa11.06□□□□□ -0.64
VAPA-202ENST00000400000 MYMXA0A1B0GTQ4 84 aa11.06□□□□□ -0.64
VAPA-202ENST00000400000 SPINK8P0C7L1 97 aa11.06□□□□□ -0.64
VAPA-202ENST00000400000 ZC2HC1BQ5TFG8 222 aa11.06□□□□□ -0.64
VAPA-202ENST00000400000 PRSS29PA6NIE9 313 aa11.05□□□□□ -0.64
VAPA-202ENST00000400000 DKK4Q9UBT3 224 aa11.05□□□□□ -0.64
VAPA-202ENST00000400000 KMT2EQ8IZD2 1858 aa11.05□□□□□ -0.64
VAPA-202ENST00000400000 NOP10Q9NPE3 64 aaKnown RBP11.05□□□□□ -0.64
VAPA-202ENST00000400000 FAM90A9PA6NNJ1 464 aa11.05□□□□□ -0.64
VAPA-202ENST00000400000 F6UB75 175 aa11.05□□□□□ -0.64
VAPA-202ENST00000400000 MPV17L2Q567V2 206 aa11.05□□□□□ -0.64
VAPA-202ENST00000400000 APRG1Q8IVJ8 170 aa11.05□□□□□ -0.64
VAPA-202ENST00000400000 VWC2Q2TAL6 325 aa11.04□□□□□ -0.64
VAPA-202ENST00000400000 SCRT2Q9NQ03 307 aa11.04□□□□□ -0.64
VAPA-202ENST00000400000 K7EM74 188 aa11.04□□□□□ -0.64
VAPA-202ENST00000400000 XCL1P47992 114 aa11.04□□□□□ -0.64
VAPA-202ENST00000400000 KIR3DS1Q14943 382 aa11.04□□□□□ -0.64
VAPA-202ENST00000400000 CYYR1Q96J86 154 aa11.04□□□□□ -0.64
VAPA-202ENST00000400000 C22orf46C9J442 243 aa11.04□□□□□ -0.64
VAPA-202ENST00000400000 E9PQ18 207 aa11.04□□□□□ -0.64
VAPA-202ENST00000400000 CYTL1Q9NRR1 136 aa11.04□□□□□ -0.64
VAPA-202ENST00000400000 ABCA1O95477 2261 aa11.04□□□□□ -0.64
VAPA-202ENST00000400000 hADV29S1A0JD25 119 aa11.04□□□□□ -0.64
VAPA-202ENST00000400000 EREGO14944 169 aa11.04□□□□□ -0.64
VAPA-202ENST00000400000 WNK2Q9Y3S1 2297 aa11.04□□□□□ -0.64
VAPA-202ENST00000400000 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.04□□□□□ -0.64
VAPA-202ENST00000400000 C3orf79P0CE67 100 aa11.04□□□□□ -0.64
VAPA-202ENST00000400000 TAL2Q16559 108 aa11.04□□□□□ -0.64
VAPA-202ENST00000400000 ZFAND6Q6FIF0 208 aa11.04□□□□□ -0.64
VAPA-202ENST00000400000 HLA-DMBP28068 263 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms