RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 DCANP1Q8TF63 244 aa15.93■□□□□ 0.14
CPNE1-204ENST00000397443 MDFIQ99750 246 aa15.93■□□□□ 0.14
CPNE1-204ENST00000397443 TMEM250H0YL14 139 aa15.92■□□□□ 0.14
CPNE1-204ENST00000397443 PEX7O00628 323 aa15.92■□□□□ 0.14
CPNE1-204ENST00000397443 GOLT1AQ6ZVE7 132 aa15.92■□□□□ 0.14
CPNE1-204ENST00000397443 C20orf173Q96LM9 149 aa15.92■□□□□ 0.14
CPNE1-204ENST00000397443 TRAV34A0A0B4J273 112 aa15.92■□□□□ 0.14
CPNE1-204ENST00000397443 PAFAH1B2P68402 229 aa15.92■□□□□ 0.14
CPNE1-204ENST00000397443 PARLQ9H300 379 aa15.92■□□□□ 0.14
CPNE1-204ENST00000397443 TCRAP04437 139 aa15.91■□□□□ 0.14
CPNE1-204ENST00000397443 ZNF688P0C7X2 276 aa15.91■□□□□ 0.14
CPNE1-204ENST00000397443 CD33P20138 364 aa15.91■□□□□ 0.14
CPNE1-204ENST00000397443 CSN1S1P47710 185 aa15.91■□□□□ 0.14
CPNE1-204ENST00000397443 DEFB1P60022 68 aa15.91■□□□□ 0.14
CPNE1-204ENST00000397443 GUCA2BQ16661 112 aa15.91■□□□□ 0.14
CPNE1-204ENST00000397443 SIGLEC8Q9NYZ4 499 aa15.91■□□□□ 0.14
CPNE1-204ENST00000397443 AKR1C3P42330 323 aa15.9■□□□□ 0.14
CPNE1-204ENST00000397443 LCN12Q6JVE5 192 aa15.9■□□□□ 0.14
CPNE1-204ENST00000397443 ZNF738Q8NE65 137 aa15.9■□□□□ 0.14
CPNE1-204ENST00000397443 IGKV2-40A0A087WW87 121 aaPredicted RBP15.9■□□□□ 0.14
CPNE1-204ENST00000397443 PRAC2D3DTV9 90 aa15.9■□□□□ 0.14
CPNE1-204ENST00000397443 ISLRO14498 428 aa15.9■□□□□ 0.14
CPNE1-204ENST00000397443 TSPAN4O14817 238 aa15.9■□□□□ 0.14
CPNE1-204ENST00000397443 IGKV2D-40P01614 121 aaPredicted RBP15.9■□□□□ 0.14
CPNE1-204ENST00000397443 C11orf52Q96A22 123 aa15.9■□□□□ 0.14
CPNE1-204ENST00000397443 SMIM7Q9BQ49 75 aa15.9■□□□□ 0.14
CPNE1-204ENST00000397443 ATG101Q9BSB4 218 aa15.9■□□□□ 0.14
CPNE1-204ENST00000397443 TRAV8-1A0A0A6YYK1 113 aa15.89■□□□□ 0.13
CPNE1-204ENST00000397443 DIRC3C9JPN6 131 aa15.89■□□□□ 0.13
CPNE1-204ENST00000397443 K7EQG2 157 aa15.89■□□□□ 0.13
CPNE1-204ENST00000397443 ID1P41134 155 aa15.89■□□□□ 0.13
CPNE1-204ENST00000397443 RPL35P42766 123 aaKnown RBP15.89■□□□□ 0.13
CPNE1-204ENST00000397443 PSG3Q16557 428 aa15.89■□□□□ 0.13
CPNE1-204ENST00000397443 C2CD4CQ8TF44 421 aa15.89■□□□□ 0.13
CPNE1-204ENST00000397443 HIST1H2BAQ96A08 127 aa15.89■□□□□ 0.13
CPNE1-204ENST00000397443 ZNF727A8MUV8 499 aa15.88■□□□□ 0.13
CPNE1-204ENST00000397443 PSMG4Q5JS54 123 aa15.88■□□□□ 0.13
CPNE1-204ENST00000397443 ASCL2Q99929 193 aa15.88■□□□□ 0.13
CPNE1-204ENST00000397443 ZNF705DP0CH99 300 aaPredicted RBP15.88■□□□□ 0.13
CPNE1-204ENST00000397443 ZNF705BP0CI00 300 aaPredicted RBP15.88■□□□□ 0.13
CPNE1-204ENST00000397443 CNN1P51911 297 aaKnown RBP15.88■□□□□ 0.13
CPNE1-204ENST00000397443 KRBOX1C9JBD0 128 aa15.87■□□□□ 0.13
CPNE1-204ENST00000397443 IGLV1-51P01701 117 aa15.87■□□□□ 0.13
CPNE1-204ENST00000397443 PGPEP1LA6NFU8 196 aa15.86■□□□□ 0.13
CPNE1-204ENST00000397443 APOC3P02656 99 aa15.86■□□□□ 0.13
CPNE1-204ENST00000397443 SNRPD3P62318 126 aaKnown RBP15.86■□□□□ 0.13
CPNE1-204ENST00000397443 TCEAL7Q9BRU2 100 aa15.86■□□□□ 0.13
CPNE1-204ENST00000397443 SEC11CQ9BY50 192 aa15.86■□□□□ 0.13
CPNE1-204ENST00000397443 AURKAIP1Q9NWT8 199 aaPredicted RBP15.86■□□□□ 0.13
CPNE1-204ENST00000397443 F6UB75 175 aa15.86■□□□□ 0.13
CPNE1-204ENST00000397443 UBE2G1P62253 170 aa15.86■□□□□ 0.13
CPNE1-204ENST00000397443 ERCC8Q13216 396 aa15.86■□□□□ 0.13
CPNE1-204ENST00000397443 PRELID1Q9Y255 219 aa15.86■□□□□ 0.13
CPNE1-204ENST00000397443 NHLRC2Q8NBF2 726 aa15.85■□□□□ 0.13
CPNE1-204ENST00000397443 VGLL1Q99990 258 aa15.85■□□□□ 0.13
CPNE1-204ENST00000397443 TRBV20OR9-2A0A075B6H5 130 aa15.84■□□□□ 0.13
CPNE1-204ENST00000397443 IGLL1P15814 213 aa15.84■□□□□ 0.13
CPNE1-204ENST00000397443 SAMD13Q5VXD3 122 aa15.84■□□□□ 0.13
CPNE1-204ENST00000397443 SPAG8Q99932 426 aaPredicted RBP15.84■□□□□ 0.13
CPNE1-204ENST00000397443 TRAV25A0A0B4J276 109 aa15.84■□□□□ 0.13
CPNE1-204ENST00000397443 OR4C46A6NHA9 309 aa15.84■□□□□ 0.13
CPNE1-204ENST00000397443 K7EQM0 130 aa15.84■□□□□ 0.13
CPNE1-204ENST00000397443 CENPWQ5EE01 88 aa15.84■□□□□ 0.13
CPNE1-204ENST00000397443 C9orf66Q5T8R8 295 aa15.84■□□□□ 0.13
CPNE1-204ENST00000397443 PRNTQ86SH4 94 aa15.84■□□□□ 0.13
CPNE1-204ENST00000397443 NIPSNAP3BQ9BS92 247 aa15.84■□□□□ 0.13
CPNE1-204ENST00000397443 CLEC5AQ9NY25 188 aa15.84■□□□□ 0.13
CPNE1-204ENST00000397443 NDUFS6O75380 124 aaKnown RBP15.83■□□□□ 0.12
CPNE1-204ENST00000397443 GNG4P50150 75 aa15.82■□□□□ 0.12
CPNE1-204ENST00000397443 DEFB131AP59861 70 aa15.82■□□□□ 0.12
CPNE1-204ENST00000397443 Q8TAT8 98 aa15.82■□□□□ 0.12
CPNE1-204ENST00000397443 MRPL53Q96EL3 112 aaKnown RBP15.82■□□□□ 0.12
CPNE1-204ENST00000397443 ZNF256Q9Y2P7 627 aaPredicted RBP15.82■□□□□ 0.12
CPNE1-204ENST00000397443 PKD1L1Q8TDX9 2849 aa15.82■□□□□ 0.12
CPNE1-204ENST00000397443 IGLV2-11P01706 119 aa15.82■□□□□ 0.12
CPNE1-204ENST00000397443 HIST1H1AQ02539 215 aaPredicted RBP15.82■□□□□ 0.12
CPNE1-204ENST00000397443 TMEM183BQ1AE95 376 aa15.82■□□□□ 0.12
CPNE1-204ENST00000397443 FMC1Q96HJ9 113 aa15.82■□□□□ 0.12
CPNE1-204ENST00000397443 AGRNO00468 2067 aa15.82■□□□□ 0.12
CPNE1-204ENST00000397443 ZNF124Q15973 351 aa15.81■□□□□ 0.12
CPNE1-204ENST00000397443 TMEM241Q24JQ0 296 aa15.81■□□□□ 0.12
CPNE1-204ENST00000397443 C10orf91Q5T1B1 145 aa15.81■□□□□ 0.12
CPNE1-204ENST00000397443 GDF5OSQ5U4N7 250 aa15.81■□□□□ 0.12
CPNE1-204ENST00000397443 WFDC9Q8NEX5 89 aa15.81■□□□□ 0.12
CPNE1-204ENST00000397443 ANK2Q01484 3957 aa15.81■□□□□ 0.12
CPNE1-204ENST00000397443 S100A1P23297 94 aa15.8■□□□□ 0.12
CPNE1-204ENST00000397443 FLI1Q01543 452 aaPredicted RBP15.8■□□□□ 0.12
CPNE1-204ENST00000397443 FAM74A3Q4VXF1 159 aa15.8■□□□□ 0.12
CPNE1-204ENST00000397443 TMEM75Q8N9X5 138 aa15.8■□□□□ 0.12
CPNE1-204ENST00000397443 PSG8Q9UQ74 426 aa15.8■□□□□ 0.12
CPNE1-204ENST00000397443 CARHSP1Q9Y2V2 147 aaKnown RBP15.8■□□□□ 0.12
CPNE1-204ENST00000397443 KLF12Q9Y4X4 402 aa15.8■□□□□ 0.12
CPNE1-204ENST00000397443 ADIRFQ15847 76 aa15.8■□□□□ 0.12
CPNE1-204ENST00000397443 Q86TA4 180 aa15.8■□□□□ 0.12
CPNE1-204ENST00000397443 BAGE2Q86Y30 109 aa15.8■□□□□ 0.12
CPNE1-204ENST00000397443 OR10J6PQ8NGY7 276 aa15.8■□□□□ 0.12
CPNE1-204ENST00000397443 IGF2BP2-AS1Q96M15 143 aa15.8■□□□□ 0.12
CPNE1-204ENST00000397443 MAP6D1Q9H9H5 199 aa15.8■□□□□ 0.12
CPNE1-204ENST00000397443 NAT8Q9UHE5 227 aa15.8■□□□□ 0.12
CPNE1-204ENST00000397443 TRAV2A0A0B4J234 112 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms