RNA–Protein interactions for RNA: ENST00000389993.7

PSME4-201, Transcript of proteasome activator subunit 4, humanhuman

TSL 1 (best)

Gene PSME4, Length 6,581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-201ENST00000389993 FABP2P12104 132 aa11.62□□□□□ -0.55
PSME4-201ENST00000389993 F6UB75 175 aa11.62□□□□□ -0.55
PSME4-201ENST00000389993 SPRY4Q9C004 299 aa11.62□□□□□ -0.55
PSME4-201ENST00000389993 TMEM75Q8N9X5 138 aa11.61□□□□□ -0.55
PSME4-201ENST00000389993 GNB1LQ9BYB4 327 aa11.61□□□□□ -0.55
PSME4-201ENST00000389993 PRO3102Q9H379 93 aa11.61□□□□□ -0.55
PSME4-201ENST00000389993 CD28P10747 220 aa11.61□□□□□ -0.55
PSME4-201ENST00000389993 SLC25A16P16260 332 aa11.61□□□□□ -0.55
PSME4-201ENST00000389993 DEFB112Q30KQ8 113 aa11.61□□□□□ -0.55
PSME4-201ENST00000389993 HIST3H2BBQ8N257 126 aa11.61□□□□□ -0.55
PSME4-201ENST00000389993 MRPL16Q9NX20 251 aaKnown RBP11.61□□□□□ -0.55
PSME4-201ENST00000389993 IGFL2Q6UWQ7 119 aa11.61□□□□□ -0.55
PSME4-201ENST00000389993 Q8NA96 180 aa11.61□□□□□ -0.55
PSME4-201ENST00000389993 GGTLC3B5MD39 225 aa11.6□□□□□ -0.55
PSME4-201ENST00000389993 NEGR1Q7Z3B1 354 aa11.6□□□□□ -0.55
PSME4-201ENST00000389993 H7C1H1 209 aa11.6□□□□□ -0.55
PSME4-201ENST00000389993 J3QKU1 62 aa11.6□□□□□ -0.55
PSME4-201ENST00000389993 OVOL1O14753 267 aa11.6□□□□□ -0.55
PSME4-201ENST00000389993 IFI27P40305 119 aaPredicted RBP11.6□□□□□ -0.55
PSME4-201ENST00000389993 SHANK2-AS3Q9BTD1 123 aa11.6□□□□□ -0.55
PSME4-201ENST00000389993 VCX2Q9H322 139 aa11.6□□□□□ -0.55
PSME4-201ENST00000389993 ZNF876PQ49A33 203 aa11.6□□□□□ -0.55
PSME4-201ENST00000389993 CHCHD5Q9BSY4 110 aa11.6□□□□□ -0.55
PSME4-201ENST00000389993 C2orf88Q9BSF0 95 aa11.6□□□□□ -0.55
PSME4-201ENST00000389993 NACAE9PAV3 2078 aa11.6□□□□□ -0.55
PSME4-201ENST00000389993 Q86TA4 180 aa11.59□□□□□ -0.55
PSME4-201ENST00000389993 C12orf54Q6X4T0 127 aa11.59□□□□□ -0.55
PSME4-201ENST00000389993 TRAV1-1A0A0B4J248 108 aa11.59□□□□□ -0.55
PSME4-201ENST00000389993 IGHV2-70P01814 119 aa11.59□□□□□ -0.55
PSME4-201ENST00000389993 DUSP14O95147 198 aaKnown RBP11.59□□□□□ -0.55
PSME4-201ENST00000389993 LYRM7Q5U5X0 104 aa11.59□□□□□ -0.55
PSME4-201ENST00000389993 MED12LQ86YW9 2145 aa11.59□□□□□ -0.55
PSME4-201ENST00000389993 RNF138Q8WVD3 245 aa11.58□□□□□ -0.55
PSME4-201ENST00000389993 TRAV2A0A0B4J234 112 aa11.58□□□□□ -0.56
PSME4-201ENST00000389993 SRSF1Q07955 248 aaKnown RBP eCLIP11.58□□□□□ -0.564e-7■■■■□ 20.1
PSME4-201ENST00000389993 FNDC4Q9H6D8 234 aaPredicted RBP11.58□□□□□ -0.56
PSME4-201ENST00000389993 IGHV2-5P01817 119 aa11.58□□□□□ -0.56
PSME4-201ENST00000389993 HBDP02042 147 aa11.58□□□□□ -0.56
PSME4-201ENST00000389993 DAZ1Q9NQZ3 744 aaKnown RBP11.58□□□□□ -0.56
PSME4-201ENST00000389993 CHTOPQ9Y3Y2 248 aaKnown RBP11.58□□□□□ -0.56
PSME4-201ENST00000389993 RNF5Q99942 180 aa11.58□□□□□ -0.56
PSME4-201ENST00000389993 VGLL1Q99990 258 aa11.58□□□□□ -0.56
PSME4-201ENST00000389993 A0A096LPF7 62 aa11.57□□□□□ -0.56
PSME4-201ENST00000389993 BLCAPP62952 87 aa11.57□□□□□ -0.56
PSME4-201ENST00000389993 CBY1Q9Y3M2 126 aa11.57□□□□□ -0.56
PSME4-201ENST00000389993 TMEM238LA0A1B0GVL6 79 aa11.57□□□□□ -0.56
PSME4-201ENST00000389993 A6NJY4 79 aa11.57□□□□□ -0.56
PSME4-201ENST00000389993 FAM223BA6NKX1 122 aa11.57□□□□□ -0.56
PSME4-201ENST00000389993 SMIM13P0DJ93 91 aa11.57□□□□□ -0.56
PSME4-201ENST00000389993 PLP1P60201 277 aa11.57□□□□□ -0.56
PSME4-201ENST00000389993 FAM223AQ8IWN6 122 aa11.57□□□□□ -0.56
PSME4-201ENST00000389993 OOSP1A8MZH6 123 aa11.57□□□□□ -0.56
PSME4-201ENST00000389993 CIRBPQ14011 172 aaKnown RBP11.57□□□□□ -0.56
PSME4-201ENST00000389993 OTOGLQ3ZCN5 2332 aa11.57□□□□□ -0.56
PSME4-201ENST00000389993 Q6AWC8 147 aa11.57□□□□□ -0.56
PSME4-201ENST00000389993 SPG11Q96JI7 2443 aa11.57□□□□□ -0.56
PSME4-201ENST00000389993 IGHV3-38A0A0C4DH36 116 aa11.57□□□□□ -0.56
PSME4-201ENST00000389993 ATP5LO75964 103 aa11.57□□□□□ -0.56
PSME4-201ENST00000389993 MALP21145 153 aa11.57□□□□□ -0.56
PSME4-201ENST00000389993 C5orf30Q96GV9 206 aa11.57□□□□□ -0.56
PSME4-201ENST00000389993 ZFP36P26651 326 aaKnown RBP11.57□□□□□ -0.56
PSME4-201ENST00000389993 CSTL1Q9H114 145 aa11.57□□□□□ -0.56
PSME4-201ENST00000389993 ALPK3Q96L96 1907 aa11.56□□□□□ -0.56
PSME4-201ENST00000389993 IGHV4-39P01824 125 aa11.56□□□□□ -0.56
PSME4-201ENST00000389993 PRDM13Q9H4Q3 707 aa11.56□□□□□ -0.56
PSME4-201ENST00000389993 UBE2CO00762 179 aa11.56□□□□□ -0.56
PSME4-201ENST00000389993 LHBP01229 141 aa11.56□□□□□ -0.56
PSME4-201ENST00000389993 MORN5Q5VZ52 161 aa11.56□□□□□ -0.56
PSME4-201ENST00000389993 C8orf86Q6ZUL3 223 aa11.56□□□□□ -0.56
PSME4-201ENST00000389993 NHP2Q9NX24 153 aaKnown RBP11.56□□□□□ -0.56
PSME4-201ENST00000389993 TDGF1P3P51864 188 aa11.56□□□□□ -0.56
PSME4-201ENST00000389993 CUL9Q8IWT3 2517 aa11.56□□□□□ -0.56
PSME4-201ENST00000389993 SOX21Q9Y651 276 aaPredicted RBP11.56□□□□□ -0.56
PSME4-201ENST00000389993 E7EUB6 86 aa11.55□□□□□ -0.56
PSME4-201ENST00000389993 C19orf84I3L1E1 186 aa11.55□□□□□ -0.56
PSME4-201ENST00000389993 IFI27L1Q96BM0 104 aa11.55□□□□□ -0.56
PSME4-201ENST00000389993 USMG5Q96IX5 58 aa11.55□□□□□ -0.56
PSME4-201ENST00000389993 DEFB1P60022 68 aa11.55□□□□□ -0.56
PSME4-201ENST00000389993 TCTEX1D4Q5JR98 221 aa11.55□□□□□ -0.56
PSME4-201ENST00000389993 H3BUT2 72 aa11.55□□□□□ -0.56
PSME4-201ENST00000389993 SMAGPQ0VAQ4 97 aa11.55□□□□□ -0.56
PSME4-201ENST00000389993 KRTAP27-1Q3LI81 207 aa11.55□□□□□ -0.56
PSME4-201ENST00000389993 C3orf56Q8N813 242 aa11.55□□□□□ -0.56
PSME4-201ENST00000389993 TMEM158Q8WZ71 300 aa11.54□□□□□ -0.56
PSME4-201ENST00000389993 OR9G4Q8NGQ1 327 aa11.54□□□□□ -0.56
PSME4-201ENST00000389993 LAGE3Q14657 143 aa11.54□□□□□ -0.56
PSME4-201ENST00000389993 LINC00469Q8N7U9 141 aa11.54□□□□□ -0.56
PSME4-201ENST00000389993 MUC22E2RYF6 1773 aaPredicted RBP11.54□□□□□ -0.56
PSME4-201ENST00000389993 TRGV11A0A075B6L2 103 aa11.54□□□□□ -0.56
PSME4-201ENST00000389993 NDUFS8O00217 210 aa11.54□□□□□ -0.56
PSME4-201ENST00000389993 TRBV24-1A0A075B6N3 115 aa11.53□□□□□ -0.56
PSME4-201ENST00000389993 JOSD1Q15040 202 aaPredicted RBP11.53□□□□□ -0.56
PSME4-201ENST00000389993 CYSLTR1Q9Y271 337 aa11.53□□□□□ -0.56
PSME4-201ENST00000389993 ADARB2-AS1A8MUL3 147 aa11.53□□□□□ -0.56
PSME4-201ENST00000389993 A0A087X0K7 114 aa11.53□□□□□ -0.56
PSME4-201ENST00000389993 F2Z2F3 143 aa11.53□□□□□ -0.56
PSME4-201ENST00000389993 IGKCP01834 107 aa11.53□□□□□ -0.56
PSME4-201ENST00000389993 C9orf139Q6ZV77 190 aa11.53□□□□□ -0.56
PSME4-201ENST00000389993 TRBV19A0A075B6N1 114 aa11.52□□□□□ -0.56
PSME4-201ENST00000389993 PLA2G2EQ9NZK7 142 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms