RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 ZNF318Q5VUA4 2279 aa5.73□□□□□ -1.49
CCDC171-201ENST00000380701 RALGAPA1Q6GYQ0 2036 aa5.73□□□□□ -1.49
CCDC171-201ENST00000380701 ANK1P16157 1881 aa5.73□□□□□ -1.49
CCDC171-201ENST00000380701 IGKV3D-20A0A0C4DH25 116 aa5.73□□□□□ -1.49
CCDC171-201ENST00000380701 H3BQ85 93 aa5.73□□□□□ -1.49
CCDC171-201ENST00000380701 SPART-AS1P0CW21 52 aa5.73□□□□□ -1.49
CCDC171-201ENST00000380701 INAFM2P0DMQ5 153 aa5.73□□□□□ -1.49
CCDC171-201ENST00000380701 ZNF134P52741 427 aa5.73□□□□□ -1.49
CCDC171-201ENST00000380701 ATOH7Q8N100 152 aa5.73□□□□□ -1.49
CCDC171-201ENST00000380701 Q8N8P6 123 aa5.73□□□□□ -1.49
CCDC171-201ENST00000380701 RNF138Q8WVD3 245 aa5.73□□□□□ -1.49
CCDC171-201ENST00000380701 CACNA1GO43497 2377 aa5.72□□□□□ -1.49
CCDC171-201ENST00000380701 HERVK_113P63121 156 aa5.72□□□□□ -1.49
CCDC171-201ENST00000380701 CTAG1AP78358 180 aa5.72□□□□□ -1.49
CCDC171-201ENST00000380701 TMEM126AQ9H061 195 aa5.72□□□□□ -1.49
CCDC171-201ENST00000380701 A0A1B0GV72 72 aa5.72□□□□□ -1.49
CCDC171-201ENST00000380701 MRPL23Q16540 153 aaKnown RBP5.72□□□□□ -1.49
CCDC171-201ENST00000380701 HS3ST6Q96QI5 342 aa5.72□□□□□ -1.49
CCDC171-201ENST00000380701 C20orf144Q9BQM9 153 aa5.72□□□□□ -1.49
CCDC171-201ENST00000380701 ABCA4P78363 2273 aa5.72□□□□□ -1.49
CCDC171-201ENST00000380701 PAX9P55771 341 aa5.72□□□□□ -1.49
CCDC171-201ENST00000380701 GATD1Q8NB37 220 aa5.72□□□□□ -1.49
CCDC171-201ENST00000380701 RPL32P62910 135 aaKnown RBP5.72□□□□□ -1.49
CCDC171-201ENST00000380701 DEFB112Q30KQ8 113 aa5.72□□□□□ -1.49
CCDC171-201ENST00000380701 PRSS57Q6UWY2 283 aa5.72□□□□□ -1.49
CCDC171-201ENST00000380701 NPBQ8NG41 125 aa5.72□□□□□ -1.49
CCDC171-201ENST00000380701 C16orf74Q96GX8 76 aa5.72□□□□□ -1.49
CCDC171-201ENST00000380701 CHD5Q8TDI0 1954 aa5.72□□□□□ -1.49
CCDC171-201ENST00000380701 TRAV8-4A0A0B4J246 113 aa5.72□□□□□ -1.49
CCDC171-201ENST00000380701 CLPSL1A2RUU4 121 aa5.72□□□□□ -1.49
CCDC171-201ENST00000380701 INS-IGF2F8WCM5 200 aa5.72□□□□□ -1.49
CCDC171-201ENST00000380701 C15orf65H3BRN8 121 aa5.72□□□□□ -1.49
CCDC171-201ENST00000380701 LY6HO94772 140 aa5.72□□□□□ -1.49
CCDC171-201ENST00000380701 ZSWIM8A7E2V4 1837 aa5.71□□□□□ -1.49
CCDC171-201ENST00000380701 TRAV8-2A0A0B4J237 113 aa5.71□□□□□ -1.49
CCDC171-201ENST00000380701 TRAV13-1A0A0B4J241 112 aa5.71□□□□□ -1.49
CCDC171-201ENST00000380701 GAGE12JA6NER3 117 aa5.71□□□□□ -1.49
CCDC171-201ENST00000380701 K7EMT4 169 aa5.71□□□□□ -1.49
CCDC171-201ENST00000380701 ATP5G1P05496 136 aa5.71□□□□□ -1.49
CCDC171-201ENST00000380701 PLXNA3P51805 1871 aa5.71□□□□□ -1.49
CCDC171-201ENST00000380701 GAGE1Q13065 139 aa5.71□□□□□ -1.49
CCDC171-201ENST00000380701 GAGE4Q13068 117 aa5.71□□□□□ -1.49
CCDC171-201ENST00000380701 GAGE5Q13069 117 aa5.71□□□□□ -1.49
CCDC171-201ENST00000380701 PMVKQ15126 192 aa5.71□□□□□ -1.49
CCDC171-201ENST00000380701 GAGE13Q4V321 117 aa5.71□□□□□ -1.49
CCDC171-201ENST00000380701 NUP35Q8NFH5 326 aa5.71□□□□□ -1.49
CCDC171-201ENST00000380701 LOC102724200A0A096LPH7 203 aaPredicted RBP5.71□□□□□ -1.5
CCDC171-201ENST00000380701 CENPVL3A0A0U1RRI6 287 aa5.71□□□□□ -1.5
CCDC171-201ENST00000380701 CRLF1O75462 422 aa5.71□□□□□ -1.5
CCDC171-201ENST00000380701 HOXB4P17483 251 aaPredicted RBP5.71□□□□□ -1.5
CCDC171-201ENST00000380701 LOXL1Q08397 574 aaPredicted RBP5.71□□□□□ -1.5
CCDC171-201ENST00000380701 FAM19A2Q8N3H0 131 aa5.71□□□□□ -1.5
CCDC171-201ENST00000380701 SPTBP11277 2137 aa5.71□□□□□ -1.5
CCDC171-201ENST00000380701 Q8TAT8 98 aa5.71□□□□□ -1.5
CCDC171-201ENST00000380701 SNHG12Q9BXW3 62 aa5.71□□□□□ -1.5
CCDC171-201ENST00000380701 CYTL1Q9NRR1 136 aa5.71□□□□□ -1.5
CCDC171-201ENST00000380701 CGB3P0DN86 165 aa5.71□□□□□ -1.5
CCDC171-201ENST00000380701 CITED1Q99966 193 aa5.71□□□□□ -1.5
CCDC171-201ENST00000380701 SPINK13Q1W4C9 94 aa5.71□□□□□ -1.5
CCDC171-201ENST00000380701 GFI1BQ5VTD9 330 aa5.71□□□□□ -1.5
CCDC171-201ENST00000380701 C14orf144Q96I85 54 aa5.71□□□□□ -1.5
CCDC171-201ENST00000380701 PRR25Q96S07 402 aa5.71□□□□□ -1.5
CCDC171-201ENST00000380701 FAM104BQ5XKR9 115 aa5.7□□□□□ -1.5
CCDC171-201ENST00000380701 ICOSQ9Y6W8 199 aa5.7□□□□□ -1.5
CCDC171-201ENST00000380701 SCN5AQ14524 2016 aa5.7□□□□□ -1.5
CCDC171-201ENST00000380701 NDUFAF3Q9BU61 184 aa5.7□□□□□ -1.5
CCDC171-201ENST00000380701 GAGE12BA1L429 117 aa5.7□□□□□ -1.5
CCDC171-201ENST00000380701 C22orf46C9J442 243 aa5.7□□□□□ -1.5
CCDC171-201ENST00000380701 G3V318 75 aa5.7□□□□□ -1.5
CCDC171-201ENST00000380701 GAGE7O76087 117 aa5.7□□□□□ -1.5
CCDC171-201ENST00000380701 GAGE12FP0CL80 117 aa5.7□□□□□ -1.5
CCDC171-201ENST00000380701 GAGE12GP0CL81 117 aa5.7□□□□□ -1.5
CCDC171-201ENST00000380701 GAGE12IP0CL82 117 aa5.7□□□□□ -1.5
CCDC171-201ENST00000380701 SSBP2P81877 361 aaPredicted RBP5.7□□□□□ -1.5
CCDC171-201ENST00000380701 FSTL3O95633 263 aa5.7□□□□□ -1.5
CCDC171-201ENST00000380701 IGLV3-1P01715 115 aa5.7□□□□□ -1.5
CCDC171-201ENST00000380701 GP9P14770 177 aa5.7□□□□□ -1.5
CCDC171-201ENST00000380701 KLF5Q13887 457 aaPredicted RBP5.7□□□□□ -1.5
CCDC171-201ENST00000380701 VSIRQ9H7M9 311 aa5.7□□□□□ -1.5
CCDC171-201ENST00000380701 IGHV3-73A0A0B4J1V6 119 aa5.7□□□□□ -1.5
CCDC171-201ENST00000380701 IGLC1P0CG04 106 aa5.7□□□□□ -1.5
CCDC171-201ENST00000380701 FXYD7P58549 80 aa5.7□□□□□ -1.5
CCDC171-201ENST00000380701 FHL1Q13642 323 aa5.7□□□□□ -1.5
CCDC171-201ENST00000380701 LINC01545Q5VT33 79 aa5.7□□□□□ -1.5
CCDC171-201ENST00000380701 UBE2CO00762 179 aa5.69□□□□□ -1.5
CCDC171-201ENST00000380701 RBMY1FQ15415 496 aaKnown RBP5.69□□□□□ -1.5
CCDC171-201ENST00000380701 CGB7P0DN87 165 aa5.69□□□□□ -1.5
CCDC171-201ENST00000380701 IL15RAQ13261 267 aa5.69□□□□□ -1.5
CCDC171-201ENST00000380701 C1orf43Q9BWL3 253 aa5.69□□□□□ -1.5
CCDC171-201ENST00000380701 CACNA1IQ9P0X4 2223 aa5.69□□□□□ -1.5
CCDC171-201ENST00000380701 C2orf66Q6UXQ4 117 aa5.69□□□□□ -1.5
CCDC171-201ENST00000380701 WFDC12Q8WWY7 111 aa5.69□□□□□ -1.5
CCDC171-201ENST00000380701 SDHAF1A6NFY7 115 aa5.69□□□□□ -1.5
CCDC171-201ENST00000380701 H3BUT2 72 aa5.69□□□□□ -1.5
CCDC171-201ENST00000380701 NCR2O95944 276 aa5.69□□□□□ -1.5
CCDC171-201ENST00000380701 Q0VG73 95 aa5.69□□□□□ -1.5
CCDC171-201ENST00000380701 TRAV13-2A0A0B4J235 113 aa5.69□□□□□ -1.5
CCDC171-201ENST00000380701 IGHV4-39P01824 125 aa5.69□□□□□ -1.5
CCDC171-201ENST00000380701 AMN1Q8IY45 258 aa5.69□□□□□ -1.5
CCDC171-201ENST00000380701 A0A087WWL8 130 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms