RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 RPL7P18124 248 aaKnown RBP19.76■□□□□ 0.75
C9orf40-201ENST00000376854 ZNF738Q8NE65 137 aa19.76■□□□□ 0.75
C9orf40-201ENST00000376854 CHD8Q9HCK8 2581 aa19.76■□□□□ 0.75
C9orf40-201ENST00000376854 LINC01545Q5VT33 79 aa19.76■□□□□ 0.75
C9orf40-201ENST00000376854 PMCHL2Q9BQD1 86 aa19.76■□□□□ 0.75
C9orf40-201ENST00000376854 C11orf71Q6IPW1 123 aa19.75■□□□□ 0.75
C9orf40-201ENST00000376854 OR10AG1Q8NH19 301 aa19.75■□□□□ 0.75
C9orf40-201ENST00000376854 ZNF747Q9BV97 191 aa19.75■□□□□ 0.75
C9orf40-201ENST00000376854 SCRT2Q9NQ03 307 aa19.75■□□□□ 0.75
C9orf40-201ENST00000376854 TMEM213A2RRL7 107 aa19.75■□□□□ 0.75
C9orf40-201ENST00000376854 UCNP55089 124 aa19.75■□□□□ 0.75
C9orf40-201ENST00000376854 Q8N6K4 173 aa19.75■□□□□ 0.75
C9orf40-201ENST00000376854 D6R8Y8 96 aa19.74■□□□□ 0.75
C9orf40-201ENST00000376854 RELQ04864 619 aaPredicted RBP19.74■□□□□ 0.75
C9orf40-201ENST00000376854 MPV17L2Q567V2 206 aa19.74■□□□□ 0.75
C9orf40-201ENST00000376854 SVEP1Q4LDE5 3571 aa19.74■□□□□ 0.75
C9orf40-201ENST00000376854 IFI27P40305 119 aaPredicted RBP19.74■□□□□ 0.75
C9orf40-201ENST00000376854 PTTG1IPP53801 180 aa19.74■□□□□ 0.75
C9orf40-201ENST00000376854 SAPCD1Q5SSQ6 148 aa19.74■□□□□ 0.75
C9orf40-201ENST00000376854 MS4A6AQ9H2W1 248 aa19.73■□□□□ 0.75
C9orf40-201ENST00000376854 CCL25O15444 150 aa19.73■□□□□ 0.75
C9orf40-201ENST00000376854 CTSGP08311 255 aa19.73■□□□□ 0.75
C9orf40-201ENST00000376854 TMEM11P17152 192 aa19.73■□□□□ 0.75
C9orf40-201ENST00000376854 C1orf122Q6ZSJ8 110 aa19.73■□□□□ 0.75
C9orf40-201ENST00000376854 COX8CQ7Z4L0 72 aa19.73■□□□□ 0.75
C9orf40-201ENST00000376854 PRR25Q96S07 402 aa19.73■□□□□ 0.75
C9orf40-201ENST00000376854 RABAC1Q9UI14 185 aa19.73■□□□□ 0.75
C9orf40-201ENST00000376854 NCOR2Q9Y618 2525 aa19.72■□□□□ 0.75
C9orf40-201ENST00000376854 OOSP1A8MZH6 123 aa19.72■□□□□ 0.75
C9orf40-201ENST00000376854 SCGB2A1O75556 95 aa19.72■□□□□ 0.75
C9orf40-201ENST00000376854 FAM106CPP0CH98 169 aa19.72■□□□□ 0.75
C9orf40-201ENST00000376854 FAM106AQ4KMX7 169 aa19.72■□□□□ 0.75
C9orf40-201ENST00000376854 FAM104BQ5XKR9 115 aa19.72■□□□□ 0.75
C9orf40-201ENST00000376854 AMN1Q8IY45 258 aa19.72■□□□□ 0.75
C9orf40-201ENST00000376854 LOC389332A0A1B0GUA5 103 aa19.71■□□□□ 0.75
C9orf40-201ENST00000376854 EBI3Q14213 229 aa19.71■□□□□ 0.75
C9orf40-201ENST00000376854 U3KQK5 164 aa19.71■□□□□ 0.75
C9orf40-201ENST00000376854 SPTBN1Q01082 2364 aaKnown RBP19.71■□□□□ 0.75
C9orf40-201ENST00000376854 MUC21A0A0G2JKD1 596 aa19.71■□□□□ 0.75
C9orf40-201ENST00000376854 MUC21A0A140T8X8 626 aa19.71■□□□□ 0.75
C9orf40-201ENST00000376854 EGR2P11161 476 aaPredicted RBP19.71■□□□□ 0.75
C9orf40-201ENST00000376854 MUC21Q5SSG8 566 aa19.71■□□□□ 0.75
C9orf40-201ENST00000376854 ARL6IP6Q8N6S5 226 aa19.71■□□□□ 0.75
C9orf40-201ENST00000376854 SMAD5-AS1Q9Y6J3 95 aa19.71■□□□□ 0.75
C9orf40-201ENST00000376854 NUDT3O95989 172 aa19.7■□□□□ 0.74
C9orf40-201ENST00000376854 NHLH1Q02575 133 aa19.7■□□□□ 0.74
C9orf40-201ENST00000376854 MINOS1Q5TGZ0 78 aa19.7■□□□□ 0.74
C9orf40-201ENST00000376854 Q8TAT8 98 aa19.7■□□□□ 0.74
C9orf40-201ENST00000376854 PRELID3AQ96N28 172 aa19.7■□□□□ 0.74
C9orf40-201ENST00000376854 SIGLEC8Q9NYZ4 499 aa19.7■□□□□ 0.74
C9orf40-201ENST00000376854 MINOS1-NBL1R4GNA1 71 aa19.7■□□□□ 0.74
C9orf40-201ENST00000376854 IGHV7-81A0A0B4J1V7 117 aa19.7■□□□□ 0.74
C9orf40-201ENST00000376854 NCR2O95944 276 aa19.7■□□□□ 0.74
C9orf40-201ENST00000376854 IGFL4Q6B9Z1 124 aa19.7■□□□□ 0.74
C9orf40-201ENST00000376854 LOXL1Q08397 574 aaPredicted RBP19.69■□□□□ 0.74
C9orf40-201ENST00000376854 UBE2V1Q13404 147 aa19.69■□□□□ 0.74
C9orf40-201ENST00000376854 ORMDL3Q8N138 153 aa19.69■□□□□ 0.74
C9orf40-201ENST00000376854 VGLL1Q99990 258 aa19.69■□□□□ 0.74
C9orf40-201ENST00000376854 PPP1R14DQ9NXH3 145 aa19.69■□□□□ 0.74
C9orf40-201ENST00000376854 ZFP36P26651 326 aaKnown RBP19.69■□□□□ 0.74
C9orf40-201ENST00000376854 IGHV3OR16-8A0A075B7F1 116 aa19.68■□□□□ 0.74
C9orf40-201ENST00000376854 A0A096LNJ9 63 aa19.68■□□□□ 0.74
C9orf40-201ENST00000376854 FBLL1A6NHQ2 334 aaKnown RBP19.68■□□□□ 0.74
C9orf40-201ENST00000376854 BVES-AS1Q5T3Y7 98 aa19.68■□□□□ 0.74
C9orf40-201ENST00000376854 IGHV3-35A0A0C4DH35 117 aa19.68■□□□□ 0.74
C9orf40-201ENST00000376854 A0A1W2PPR1 153 aa19.68■□□□□ 0.74
C9orf40-201ENST00000376854 HLA-DMBP28068 263 aa19.68■□□□□ 0.74
C9orf40-201ENST00000376854 ZNF80P51504 273 aaPredicted RBP19.68■□□□□ 0.74
C9orf40-201ENST00000376854 IGHG4P01861 327 aa19.67■□□□□ 0.74
C9orf40-201ENST00000376854 MRPL51Q4U2R6 128 aaKnown RBP19.67■□□□□ 0.74
C9orf40-201ENST00000376854 ITPR1Q14643 2758 aa19.67■□□□□ 0.74
C9orf40-201ENST00000376854 BMI1P35226 326 aa19.67■□□□□ 0.74
C9orf40-201ENST00000376854 RPS20P60866 119 aaKnown RBP19.67■□□□□ 0.74
C9orf40-201ENST00000376854 Q8N9W7 124 aa19.67■□□□□ 0.74
C9orf40-201ENST00000376854 FER1L6-AS1Q8NA97 138 aa19.67■□□□□ 0.74
C9orf40-201ENST00000376854 OR8A1Q8NGG7 326 aa19.66■□□□□ 0.74
C9orf40-201ENST00000376854 TWIST1Q15672 202 aa19.65■□□□□ 0.74
C9orf40-201ENST00000376854 C12orf54Q6X4T0 127 aa19.65■□□□□ 0.74
C9orf40-201ENST00000376854 MED13LQ71F56 2210 aa19.65■□□□□ 0.74
C9orf40-201ENST00000376854 NDUFS7O75251 213 aa19.65■□□□□ 0.74
C9orf40-201ENST00000376854 HIVEP3Q5T1R4 2406 aa19.64■□□□□ 0.73
C9orf40-201ENST00000376854 COX8AP10176 69 aa19.63■□□□□ 0.73
C9orf40-201ENST00000376854 S100A7P31151 101 aa19.63■□□□□ 0.73
C9orf40-201ENST00000376854 GPR183P32249 361 aa19.63■□□□□ 0.73
C9orf40-201ENST00000376854 SIRPDQ9H106 197 aa19.63■□□□□ 0.73
C9orf40-201ENST00000376854 CKS2P33552 79 aa19.63■□□□□ 0.73
C9orf40-201ENST00000376854 HIST1H1AQ02539 215 aaPredicted RBP19.63■□□□□ 0.73
C9orf40-201ENST00000376854 C15orf32Q32M92 178 aa19.63■□□□□ 0.73
C9orf40-201ENST00000376854 A0A087X0K7 114 aa19.62■□□□□ 0.73
C9orf40-201ENST00000376854 IGLC6P0CF74 106 aa19.62■□□□□ 0.73
C9orf40-201ENST00000376854 DTX2Q86UW9 622 aa19.62■□□□□ 0.73
C9orf40-201ENST00000376854 SMKR1H3BMG3 65 aa19.62■□□□□ 0.73
C9orf40-201ENST00000376854 LY6DQ14210 128 aa19.62■□□□□ 0.73
C9orf40-201ENST00000376854 ECSCRQ19T08 205 aa19.62■□□□□ 0.73
C9orf40-201ENST00000376854 FAM110DQ8TAY7 271 aaPredicted RBP19.62■□□□□ 0.73
C9orf40-201ENST00000376854 WNK2Q9Y3S1 2297 aa19.61■□□□□ 0.73
C9orf40-201ENST00000376854 TAX1BP3O14907 124 aa19.61■□□□□ 0.73
C9orf40-201ENST00000376854 FXYD7P58549 80 aa19.61■□□□□ 0.73
C9orf40-201ENST00000376854 ZNF502Q8TBZ5 544 aa19.61■□□□□ 0.73
C9orf40-201ENST00000376854 IGHV2-70DA0A0C4DH43 119 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms