RNA–Protein interactions for RNA: ENST00000370206.8

CNN3-201, Transcript of calponin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNN3, Length 2,165 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-201ENST00000370206 IGHV3-35A0A0C4DH35 117 aa17.11■□□□□ 0.33
CNN3-201ENST00000370206 TMEM189A5PLL7 270 aa17.11■□□□□ 0.33
CNN3-201ENST00000370206 IGHG4P01861 327 aa17.11■□□□□ 0.33
CNN3-201ENST00000370206 RELQ04864 619 aaPredicted RBP17.11■□□□□ 0.33
CNN3-201ENST00000370206 CYB5R2Q6BCY4 276 aa17.11■□□□□ 0.33
CNN3-201ENST00000370206 PRR25Q96S07 402 aa17.11■□□□□ 0.33
CNN3-201ENST00000370206 IGHV3OR16-8A0A075B7F1 116 aa17.1■□□□□ 0.33
CNN3-201ENST00000370206 TCAPO15273 167 aa17.1■□□□□ 0.33
CNN3-201ENST00000370206 SPATA12Q7Z6I5 190 aa17.09■□□□□ 0.33
CNN3-201ENST00000370206 TPPP3Q9BW30 176 aa17.09■□□□□ 0.33
CNN3-201ENST00000370206 TRAV9-2A0A087WT02 112 aa17.09■□□□□ 0.33
CNN3-201ENST00000370206 CRXO43186 299 aaPredicted RBP17.09■□□□□ 0.33
CNN3-201ENST00000370206 CLEC3BP05452 202 aa17.09■□□□□ 0.33
CNN3-201ENST00000370206 ZNF493Q6ZR52 646 aa17.09■□□□□ 0.33
CNN3-201ENST00000370206 G3V318 75 aa17.08■□□□□ 0.33
CNN3-201ENST00000370206 IGHV4-39P01824 125 aa17.08■□□□□ 0.33
CNN3-201ENST00000370206 RAB9AP51151 201 aa17.08■□□□□ 0.33
CNN3-201ENST00000370206 MAJINQ3KP22 176 aa17.08■□□□□ 0.33
CNN3-201ENST00000370206 CCDC140Q96MF4 163 aa17.08■□□□□ 0.33
CNN3-201ENST00000370206 A0A087X0K7 114 aa17.08■□□□□ 0.32
CNN3-201ENST00000370206 C20orf202A1L168 122 aa17.08■□□□□ 0.32
CNN3-201ENST00000370206 LINC01548A6NM66 108 aa17.08■□□□□ 0.32
CNN3-201ENST00000370206 LEPROTL1O95214 131 aa17.08■□□□□ 0.32
CNN3-201ENST00000370206 OR5AL1P0C617 328 aa17.08■□□□□ 0.32
CNN3-201ENST00000370206 HLA-DMBP28068 263 aa17.08■□□□□ 0.32
CNN3-201ENST00000370206 IGFL4Q6B9Z1 124 aa17.08■□□□□ 0.32
CNN3-201ENST00000370206 C5orf56Q8N8D9 126 aa17.08■□□□□ 0.32
CNN3-201ENST00000370206 VGLL1Q99990 258 aa17.08■□□□□ 0.32
CNN3-201ENST00000370206 NCOR2Q9Y618 2525 aa17.07■□□□□ 0.32
CNN3-201ENST00000370206 RPLP1P05386 114 aaKnown RBP17.07■□□□□ 0.32
CNN3-201ENST00000370206 LYZL1Q6UWQ5 148 aa17.07■□□□□ 0.32
CNN3-201ENST00000370206 BUB3O43684 328 aa17.06■□□□□ 0.32
CNN3-201ENST00000370206 GOSR1O95249 250 aa17.06■□□□□ 0.32
CNN3-201ENST00000370206 ZNF138P52744 262 aa17.06■□□□□ 0.32
CNN3-201ENST00000370206 LINC00173Q6ZV60 143 aa17.06■□□□□ 0.32
CNN3-201ENST00000370206 Q8TAT8 98 aa17.06■□□□□ 0.32
CNN3-201ENST00000370206 CHD8Q9HCK8 2581 aa17.06■□□□□ 0.32
CNN3-201ENST00000370206 TMSB15BA0A087X1C1 80 aa17.06■□□□□ 0.32
CNN3-201ENST00000370206 SYS1-DBNDD2H3BUS1 97 aa17.06■□□□□ 0.32
CNN3-201ENST00000370206 PAX8Q06710 450 aa17.05■□□□□ 0.32
CNN3-201ENST00000370206 CLEC19AQ6UXS0 136 aa17.05■□□□□ 0.32
CNN3-201ENST00000370206 Q6ZN92 141 aa17.05■□□□□ 0.32
CNN3-201ENST00000370206 EEF1AKMT3Q96AZ1 226 aa17.05■□□□□ 0.32
CNN3-201ENST00000370206 CLPSL1A2RUU4 121 aa17.05■□□□□ 0.32
CNN3-201ENST00000370206 CSN3P07498 182 aa17.04■□□□□ 0.32
CNN3-201ENST00000370206 BMI1P35226 326 aa17.04■□□□□ 0.32
CNN3-201ENST00000370206 ZNF80P51504 273 aaPredicted RBP17.04■□□□□ 0.32
CNN3-201ENST00000370206 HNRNPA3P51991 378 aaKnown RBP17.04■□□□□ 0.32
CNN3-201ENST00000370206 RPS20P60866 119 aaKnown RBP17.04■□□□□ 0.32
CNN3-201ENST00000370206 TRBV7-1A0A0A6YYK4 115 aa17.04■□□□□ 0.32
CNN3-201ENST00000370206 TMEM213A2RRL7 107 aa17.03■□□□□ 0.32
CNN3-201ENST00000370206 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.03■□□□□ 0.32
CNN3-201ENST00000370206 IGLL1P15814 213 aa17.02■□□□□ 0.32
CNN3-201ENST00000370206 BATFQ16520 125 aa17.02■□□□□ 0.32
CNN3-201ENST00000370206 MOB4Q9Y3A3 225 aa17.02■□□□□ 0.32
CNN3-201ENST00000370206 OR4C46A6NHA9 309 aa17.02■□□□□ 0.31
CNN3-201ENST00000370206 SRSF2Q01130 221 aaKnown RBP17.02■□□□□ 0.31
CNN3-201ENST00000370206 SLC50A1Q9BRV3 221 aa17.02■□□□□ 0.31
CNN3-201ENST00000370206 AP5S1Q9NUS5 200 aa17.02■□□□□ 0.31
CNN3-201ENST00000370206 U3KQK5 164 aa17.02■□□□□ 0.31
CNN3-201ENST00000370206 AKAP6Q13023 2319 aa17.01■□□□□ 0.31
CNN3-201ENST00000370206 FAM104BQ5XKR9 115 aa17.01■□□□□ 0.31
CNN3-201ENST00000370206 TMEM219Q86XT9 240 aa17.01■□□□□ 0.31
CNN3-201ENST00000370206 HSPB8Q9UJY1 196 aa17.01■□□□□ 0.31
CNN3-201ENST00000370206 IGHV1-69DA0A0B4J2H0 117 aa17.01■□□□□ 0.31
CNN3-201ENST00000370206 IGHV1-69P01742 117 aa17.01■□□□□ 0.31
CNN3-201ENST00000370206 C19orf54Q5BKX5 351 aa17.01■□□□□ 0.31
CNN3-201ENST00000370206 FER1L6-AS1Q8NA97 138 aa17.01■□□□□ 0.31
CNN3-201ENST00000370206 IGHV3OR16-10A0A075B7F0 116 aa17■□□□□ 0.31
CNN3-201ENST00000370206 RBAKDNA6NC62 111 aa17■□□□□ 0.31
CNN3-201ENST00000370206 IGLC6P0CF74 106 aa17■□□□□ 0.31
CNN3-201ENST00000370206 MAP1LC3CQ9BXW4 147 aa17■□□□□ 0.31
CNN3-201ENST00000370206 PRAC2D3DTV9 90 aa16.99■□□□□ 0.31
CNN3-201ENST00000370206 TSPOP30536 169 aa16.99■□□□□ 0.31
CNN3-201ENST00000370206 ATP5G2Q06055 141 aa16.99■□□□□ 0.31
CNN3-201ENST00000370206 PET117Q6UWS5 81 aa16.99■□□□□ 0.31
CNN3-201ENST00000370206 FA2HQ7L5A8 372 aa16.99■□□□□ 0.31
CNN3-201ENST00000370206 PIMREGQ9BSJ6 248 aa16.99■□□□□ 0.31
CNN3-201ENST00000370206 CSMD1Q96PZ7 3565 aa16.99■□□□□ 0.31
CNN3-201ENST00000370206 IGHV3-66A0A0C4DH42 116 aa16.99■□□□□ 0.31
CNN3-201ENST00000370206 D6R8Y8 96 aa16.99■□□□□ 0.31
CNN3-201ENST00000370206 CRIP2P52943 208 aaPredicted RBP16.99■□□□□ 0.31
CNN3-201ENST00000370206 ERCC8Q13216 396 aa16.99■□□□□ 0.31
CNN3-201ENST00000370206 AMN1Q8IY45 258 aa16.99■□□□□ 0.31
CNN3-201ENST00000370206 RNF182Q8N6D2 247 aa16.99■□□□□ 0.31
CNN3-201ENST00000370206 PRSS3P2Q8NHM4 247 aa16.99■□□□□ 0.31
CNN3-201ENST00000370206 PIFOQ8TCI5 191 aa16.99■□□□□ 0.31
CNN3-201ENST00000370206 METTL26Q96S19 204 aa16.99■□□□□ 0.31
CNN3-201ENST00000370206 LAMTOR2Q9Y2Q5 125 aa16.99■□□□□ 0.31
CNN3-201ENST00000370206 TRAV41A0A0B4J266 112 aa16.98■□□□□ 0.31
CNN3-201ENST00000370206 COL5A1-AS1Q5SY13 56 aa16.98■□□□□ 0.31
CNN3-201ENST00000370206 ZNF575Q86XF7 245 aa16.98■□□□□ 0.31
CNN3-201ENST00000370206 PSMG3-AS1Q96PY0 264 aa16.98■□□□□ 0.31
CNN3-201ENST00000370206 ATP6V0BQ99437 205 aa16.98■□□□□ 0.31
CNN3-201ENST00000370206 TMEM191AQ9H0A3 160 aa16.98■□□□□ 0.31
CNN3-201ENST00000370206 MRPS16Q9Y3D3 137 aaKnown RBP16.98■□□□□ 0.31
CNN3-201ENST00000370206 IGHV4-61A0A0C4DH41 118 aa16.98■□□□□ 0.31
CNN3-201ENST00000370206 ABCA2Q9BZC7 2435 aa16.97■□□□□ 0.31
CNN3-201ENST00000370206 FABP5P3A8MUU1 101 aa16.97■□□□□ 0.31
CNN3-201ENST00000370206 U3KQE9 123 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms