RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 GNPNAT1Q96EK6 184 aaPredicted RBP13.4□□□□□ -0.26
CHTOP-202ENST00000368687 ODF3Q96PU9 254 aa13.4□□□□□ -0.26
CHTOP-202ENST00000368687 TMEM208Q9BTX3 173 aa13.4□□□□□ -0.26
CHTOP-202ENST00000368687 KLK5Q9Y337 293 aaPredicted RBP13.4□□□□□ -0.26
CHTOP-202ENST00000368687 RFNGQ9Y644 331 aa13.4□□□□□ -0.26
CHTOP-202ENST00000368687 A0A1W2PPV4 95 aa13.39□□□□□ -0.27
CHTOP-202ENST00000368687 H3BTX0 84 aa13.39□□□□□ -0.27
CHTOP-202ENST00000368687 TAAR5O14804 337 aa13.39□□□□□ -0.27
CHTOP-202ENST00000368687 SNRPCP09234 159 aaKnown RBP13.39□□□□□ -0.27
CHTOP-202ENST00000368687 Q5BKY6 102 aa13.39□□□□□ -0.27
CHTOP-202ENST00000368687 PQLC2Q6ZP29 291 aa13.39□□□□□ -0.27
CHTOP-202ENST00000368687 LYPD1Q8N2G4 141 aa13.39□□□□□ -0.27
CHTOP-202ENST00000368687 RNF222A6NCQ9 220 aa13.38□□□□□ -0.27
CHTOP-202ENST00000368687 HBE1P02100 147 aa13.38□□□□□ -0.27
CHTOP-202ENST00000368687 CDKN1BP46527 198 aa13.38□□□□□ -0.27
CHTOP-202ENST00000368687 UBE2L3P68036 154 aaKnown RBP13.38□□□□□ -0.27
CHTOP-202ENST00000368687 SPINK13Q1W4C9 94 aa13.38□□□□□ -0.27
CHTOP-202ENST00000368687 BLNKQ8WV28 456 aa13.38□□□□□ -0.27
CHTOP-202ENST00000368687 RNF141Q8WVD5 230 aa13.38□□□□□ -0.27
CHTOP-202ENST00000368687 C20orf144Q9BQM9 153 aa13.38□□□□□ -0.27
CHTOP-202ENST00000368687 IGHV3OR16-12A0A075B7B8 117 aa13.37□□□□□ -0.27
CHTOP-202ENST00000368687 C11orf94C9JXX5 98 aa13.37□□□□□ -0.27
CHTOP-202ENST00000368687 M0R2Z0 102 aa13.37□□□□□ -0.27
CHTOP-202ENST00000368687 NDUFB4O95168 129 aa13.37□□□□□ -0.27
CHTOP-202ENST00000368687 RBMY1A1P0DJD3 496 aaKnown RBP13.37□□□□□ -0.27
CHTOP-202ENST00000368687 RBMY1CP0DJD4 496 aa13.37□□□□□ -0.27
CHTOP-202ENST00000368687 PMS2P11Q13670 270 aa13.37□□□□□ -0.27
CHTOP-202ENST00000368687 RBMY1FQ15415 496 aaKnown RBP13.37□□□□□ -0.27
CHTOP-202ENST00000368687 CEMP1Q6PRD7 247 aaPredicted RBP13.37□□□□□ -0.27
CHTOP-202ENST00000368687 HSD17B11Q8NBQ5 300 aa13.37□□□□□ -0.27
CHTOP-202ENST00000368687 FXYD5Q96DB9 178 aa13.37□□□□□ -0.27
CHTOP-202ENST00000368687 DEFB4AO15263 64 aa13.36□□□□□ -0.27
CHTOP-202ENST00000368687 JTBO76095 146 aa13.36□□□□□ -0.27
CHTOP-202ENST00000368687 OR10J4P0C629 311 aa13.36□□□□□ -0.27
CHTOP-202ENST00000368687 RRN3P1Q2M238 152 aa13.36□□□□□ -0.27
CHTOP-202ENST00000368687 OR10G4Q8NGN3 311 aa13.36□□□□□ -0.27
CHTOP-202ENST00000368687 OR10G9Q8NGN4 311 aa13.36□□□□□ -0.27
CHTOP-202ENST00000368687 OR10G7Q8NGN6 311 aa13.36□□□□□ -0.27
CHTOP-202ENST00000368687 SACSQ9NZJ4 4579 aa13.35□□□□□ -0.27
CHTOP-202ENST00000368687 NPIPB6E9PJ23 425 aa13.35□□□□□ -0.27
CHTOP-202ENST00000368687 ATP6V0CP27449 155 aa13.35□□□□□ -0.27
CHTOP-202ENST00000368687 LEPP41159 167 aa13.35□□□□□ -0.27
CHTOP-202ENST00000368687 CSN1S1P47710 185 aa13.35□□□□□ -0.27
CHTOP-202ENST00000368687 ZNF345Q14585 488 aa13.35□□□□□ -0.27
CHTOP-202ENST00000368687 C1orf158Q8N1D5 194 aa13.35□□□□□ -0.27
CHTOP-202ENST00000368687 PHLDA1Q8WV24 401 aaPredicted RBP13.35□□□□□ -0.27
CHTOP-202ENST00000368687 G3V3Q6 166 aa13.34□□□□□ -0.27
CHTOP-202ENST00000368687 ARPC5O15511 151 aa13.34□□□□□ -0.27
CHTOP-202ENST00000368687 CRXO43186 299 aaPredicted RBP13.34□□□□□ -0.27
CHTOP-202ENST00000368687 CDC34P49427 236 aaPredicted RBP13.34□□□□□ -0.27
CHTOP-202ENST00000368687 ICAM4Q14773 271 aa13.34□□□□□ -0.27
CHTOP-202ENST00000368687 FAM74A1Q5RGS3 127 aa13.34□□□□□ -0.27
CHTOP-202ENST00000368687 BAP18Q8IXM2 172 aa13.34□□□□□ -0.27
CHTOP-202ENST00000368687 LINC00477Q96M19 166 aa13.34□□□□□ -0.27
CHTOP-202ENST00000368687 LYSTQ99698 3801 aa13.34□□□□□ -0.27
CHTOP-202ENST00000368687 RYR2Q92736 4967 aa13.34□□□□□ -0.27
CHTOP-202ENST00000368687 PRAC2D3DTV9 90 aa13.33□□□□□ -0.28
CHTOP-202ENST00000368687 SPART-AS1P0CW21 52 aa13.33□□□□□ -0.28
CHTOP-202ENST00000368687 NANOS2P60321 138 aaKnown RBP13.33□□□□□ -0.28
CHTOP-202ENST00000368687 RAB2AP61019 212 aa13.33□□□□□ -0.28
CHTOP-202ENST00000368687 EXOC3-AS1Q8N2X6 119 aa13.33□□□□□ -0.28
CHTOP-202ENST00000368687 RPP25LQ8N5L8 163 aaKnown RBP13.33□□□□□ -0.28
CHTOP-202ENST00000368687 RXFP4Q8TDU9 374 aa13.33□□□□□ -0.28
CHTOP-202ENST00000368687 LOC102723971A0A1B0GUV8 181 aa13.32□□□□□ -0.28
CHTOP-202ENST00000368687 HMSDA8MTL9 139 aa13.32□□□□□ -0.28
CHTOP-202ENST00000368687 M0R3E3 92 aa13.32□□□□□ -0.28
CHTOP-202ENST00000368687 TCTAP57738 103 aa13.32□□□□□ -0.28
CHTOP-202ENST00000368687 TMEM78Q5T7P6 136 aa13.32□□□□□ -0.28
CHTOP-202ENST00000368687 RPL7L1Q6DKI1 246 aaKnown RBP13.32□□□□□ -0.28
CHTOP-202ENST00000368687 FAM122CQ6P4D5 195 aa13.32□□□□□ -0.28
CHTOP-202ENST00000368687 C9orf47Q6ZRZ4 202 aa13.32□□□□□ -0.28
CHTOP-202ENST00000368687 ARL6IP6Q8N6S5 226 aa13.32□□□□□ -0.28
CHTOP-202ENST00000368687 ZNF503Q96F45 646 aa13.32□□□□□ -0.28
CHTOP-202ENST00000368687 PHYHIPLQ96FC7 376 aa13.32□□□□□ -0.28
CHTOP-202ENST00000368687 TRAV12-2A0A075B6T6 113 aa13.31□□□□□ -0.28
CHTOP-202ENST00000368687 TRBV7-9A0A0J9YWB2 115 aa13.31□□□□□ -0.28
CHTOP-202ENST00000368687 LCE6AA0A183 80 aa13.31□□□□□ -0.28
CHTOP-202ENST00000368687 RBAKDNA6NC62 111 aa13.31□□□□□ -0.28
CHTOP-202ENST00000368687 H7BYZ3 331 aa13.31□□□□□ -0.28
CHTOP-202ENST00000368687 SLC25A5P05141 298 aaKnown RBP13.31□□□□□ -0.28
CHTOP-202ENST00000368687 NMBP08949 121 aa13.31□□□□□ -0.28
CHTOP-202ENST00000368687 TAS2R60P59551 318 aa13.31□□□□□ -0.28
CHTOP-202ENST00000368687 Q9H3A6 140 aa13.31□□□□□ -0.28
CHTOP-202ENST00000368687 TRAV10A0A0B4J240 114 aa13.3□□□□□ -0.28
CHTOP-202ENST00000368687 A0A0D9SG52 128 aa13.3□□□□□ -0.28
CHTOP-202ENST00000368687 STAG3L2P0CL84 134 aa13.3□□□□□ -0.28
CHTOP-202ENST00000368687 STAG3L3P0CL85 134 aa13.3□□□□□ -0.28
CHTOP-202ENST00000368687 RANP62826 216 aaKnown RBP13.3□□□□□ -0.28
CHTOP-202ENST00000368687 C2CD4CQ8TF44 421 aa13.3□□□□□ -0.28
CHTOP-202ENST00000368687 LINC01587Q99440 93 aa13.3□□□□□ -0.28
CHTOP-202ENST00000368687 ACTR3CQ9C0K3 210 aaPredicted RBP13.3□□□□□ -0.28
CHTOP-202ENST00000368687 OTORQ9NRC9 128 aa13.3□□□□□ -0.28
CHTOP-202ENST00000368687 CT45A10P0DMU9 189 aa13.29□□□□□ -0.28
CHTOP-202ENST00000368687 ZNF493Q6ZR52 646 aa13.29□□□□□ -0.28
CHTOP-202ENST00000368687 CMTM2Q8TAZ6 248 aa13.29□□□□□ -0.28
CHTOP-202ENST00000368687 RAB24Q969Q5 203 aa13.29□□□□□ -0.28
CHTOP-202ENST00000368687 ARPC5LQ9BPX5 153 aa13.29□□□□□ -0.28
CHTOP-202ENST00000368687 NIPSNAP3BQ9BS92 247 aa13.29□□□□□ -0.28
CHTOP-202ENST00000368687 SH3BGRL3Q9H299 93 aa13.29□□□□□ -0.28
CHTOP-202ENST00000368687 CXorf1O96002 111 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms