RNA–Protein interactions for RNA: ENST00000356936.5

NCL-202, Transcript of nucleolin, humanhuman

TSL 3

Gene NCL, Length 890 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-202ENST00000356936 FAM222AQ5U5X8 452 aa12.29□□□□□ -0.44
NCL-202ENST00000356936 MRPL53Q96EL3 112 aaKnown RBP12.29□□□□□ -0.44
NCL-202ENST00000356936 NIPSNAP3BQ9BS92 247 aa12.29□□□□□ -0.44
NCL-202ENST00000356936 MRPL32Q9BYC8 188 aaKnown RBP12.29□□□□□ -0.44
NCL-202ENST00000356936 ZNF586Q9NXT0 402 aa12.29□□□□□ -0.44
NCL-202ENST00000356936 APLNQ9ULZ1 77 aa12.29□□□□□ -0.44
NCL-202ENST00000356936 YTHDF2Q9Y5A9 579 aaKnown RBP12.29□□□□□ -0.44
NCL-202ENST00000356936 TIMM9Q9Y5J7 89 aa12.29□□□□□ -0.44
NCL-202ENST00000356936 IGHV4-4A0A075B6R2 117 aa12.28□□□□□ -0.44
NCL-202ENST00000356936 IFNA5P01569 189 aa12.28□□□□□ -0.44
NCL-202ENST00000356936 OXA1LQ15070 435 aa12.28□□□□□ -0.44
NCL-202ENST00000356936 SCGB1C1Q8TD33 95 aa12.28□□□□□ -0.44
NCL-202ENST00000356936 C20orf144Q9BQM9 153 aa12.28□□□□□ -0.44
NCL-202ENST00000356936 MBD2Q9UBB5 411 aa12.28□□□□□ -0.44
NCL-202ENST00000356936 PRELID1Q9Y255 219 aa12.28□□□□□ -0.44
NCL-202ENST00000356936 ALG5Q9Y673 324 aa12.28□□□□□ -0.44
NCL-202ENST00000356936 TAS2R60P59551 318 aa12.27□□□□□ -0.45
NCL-202ENST00000356936 GCSAMLQ5JQS6 135 aa12.27□□□□□ -0.45
NCL-202ENST00000356936 RPP25LQ8N5L8 163 aaKnown RBP12.27□□□□□ -0.45
NCL-202ENST00000356936 FAM210BQ96KR6 192 aa12.27□□□□□ -0.45
NCL-202ENST00000356936 LINC01587Q99440 93 aa12.27□□□□□ -0.45
NCL-202ENST00000356936 AAMDCQ9H7C9 122 aa12.27□□□□□ -0.45
NCL-202ENST00000356936 SACSQ9NZJ4 4579 aa12.27□□□□□ -0.45
NCL-202ENST00000356936 ZNF705GA8MUZ8 300 aaPredicted RBP12.26□□□□□ -0.45
NCL-202ENST00000356936 ODF3Q96PU9 254 aa12.26□□□□□ -0.45
NCL-202ENST00000356936 NDUFAF3Q9BU61 184 aa12.26□□□□□ -0.45
NCL-202ENST00000356936 SLC25A2Q9BXI2 301 aa12.26□□□□□ -0.45
NCL-202ENST00000356936 MED28Q9H204 178 aa12.26□□□□□ -0.45
NCL-202ENST00000356936 LYRM9A8MSI8 78 aa12.25□□□□□ -0.45
NCL-202ENST00000356936 PRAC2D3DTV9 90 aa12.25□□□□□ -0.45
NCL-202ENST00000356936 NPIPB6E9PJ23 425 aa12.25□□□□□ -0.45
NCL-202ENST00000356936 H7BYZ3 331 aa12.25□□□□□ -0.45
NCL-202ENST00000356936 PYYP10082 97 aa12.25□□□□□ -0.45
NCL-202ENST00000356936 LEPP41159 167 aa12.25□□□□□ -0.45
NCL-202ENST00000356936 DAD1P61803 113 aa12.25□□□□□ -0.45
NCL-202ENST00000356936 BLNKQ8WV28 456 aa12.25□□□□□ -0.45
NCL-202ENST00000356936 PARD6GQ9BYG4 376 aaPredicted RBP12.25□□□□□ -0.45
NCL-202ENST00000356936 OR51M1Q9H341 326 aa12.25□□□□□ -0.45
NCL-202ENST00000356936 FUT9Q9Y231 359 aa12.25□□□□□ -0.45
NCL-202ENST00000356936 NDUFB4O95168 129 aa12.24□□□□□ -0.45
NCL-202ENST00000356936 NBEAP1P0C6P0 100 aa12.24□□□□□ -0.45
NCL-202ENST00000356936 PRB4P10163 310 aaPredicted RBP12.24□□□□□ -0.45
NCL-202ENST00000356936 MIR17HGQ75NE6 70 aa12.24□□□□□ -0.45
NCL-202ENST00000356936 C16orf74Q96GX8 76 aa12.24□□□□□ -0.45
NCL-202ENST00000356936 FAM167A-AS1Q96KT0 104 aa12.24□□□□□ -0.45
NCL-202ENST00000356936 SMIM3Q9BZL3 60 aa12.24□□□□□ -0.45
NCL-202ENST00000356936 HTN1P15515 57 aa12.23□□□□□ -0.45
NCL-202ENST00000356936 FFAR4Q5NUL3 377 aa12.23□□□□□ -0.45
NCL-202ENST00000356936 ZNF493Q6ZR52 646 aa12.23□□□□□ -0.45
NCL-202ENST00000356936 ASB13Q8WXK3 278 aa12.23□□□□□ -0.45
NCL-202ENST00000356936 PAXXQ9BUH6 204 aa12.23□□□□□ -0.45
NCL-202ENST00000356936 M0R3E3 92 aa12.22□□□□□ -0.45
NCL-202ENST00000356936 OR7C2O60412 319 aa12.22□□□□□ -0.45
NCL-202ENST00000356936 TAS2R45P59539 299 aa12.22□□□□□ -0.45
NCL-202ENST00000356936 RNF141Q8WVD5 230 aa12.22□□□□□ -0.45
NCL-202ENST00000356936 LINC00477Q96M19 166 aa12.22□□□□□ -0.45
NCL-202ENST00000356936 PRM2P04554 102 aa12.21□□□□□ -0.45
NCL-202ENST00000356936 OR10J4P0C629 311 aa12.21□□□□□ -0.45
NCL-202ENST00000356936 P0DMU3 169 aa12.21□□□□□ -0.45
NCL-202ENST00000356936 FAM231AP0DMU4 169 aa12.21□□□□□ -0.45
NCL-202ENST00000356936 FAM231CP0DMU5 169 aa12.21□□□□□ -0.45
NCL-202ENST00000356936 CT45A10P0DMU9 189 aa12.21□□□□□ -0.45
NCL-202ENST00000356936 HTN3P15516 51 aa12.21□□□□□ -0.45
NCL-202ENST00000356936 AZU1P20160 251 aa12.21□□□□□ -0.45
NCL-202ENST00000356936 ICAM4Q14773 271 aa12.21□□□□□ -0.45
NCL-202ENST00000356936 FCN2Q15485 313 aa12.21□□□□□ -0.45
NCL-202ENST00000356936 KHDC3LQ587J8 217 aa12.21□□□□□ -0.45
NCL-202ENST00000356936 GFI1BQ5VTD9 330 aa12.21□□□□□ -0.45
NCL-202ENST00000356936 CCDC28AQ8IWP9 274 aa12.21□□□□□ -0.45
NCL-202ENST00000356936 EXOC3-AS1Q8N2X6 119 aa12.21□□□□□ -0.45
NCL-202ENST00000356936 TMEM263Q8WUH6 116 aaKnown RBP12.21□□□□□ -0.45
NCL-202ENST00000356936 TIMM8BQ9Y5J9 83 aaPredicted RBP12.21□□□□□ -0.45
NCL-202ENST00000356936 HYDINQ4G0P3 5121 aa12.2□□□□□ -0.46
NCL-202ENST00000356936 ZNF266Q14584 549 aa12.2□□□□□ -0.46
NCL-202ENST00000356936 ACOT6Q3I5F7 207 aaPredicted RBP12.2□□□□□ -0.46
NCL-202ENST00000356936 LYPD1Q8N2G4 141 aa12.2□□□□□ -0.46
NCL-202ENST00000356936 FXYD5Q96DB9 178 aa12.2□□□□□ -0.46
NCL-202ENST00000356936 PLA2G2EQ9NZK7 142 aa12.2□□□□□ -0.46
NCL-202ENST00000356936 PLECQ15149 4684 aaKnown RBP12.2□□□□□ -0.46
NCL-202ENST00000356936 PLAC8L1A1L4L8 177 aa12.19□□□□□ -0.46
NCL-202ENST00000356936 SLC25A5P05141 298 aaKnown RBP12.19□□□□□ -0.46
NCL-202ENST00000356936 GIPP09681 153 aaPredicted RBP12.19□□□□□ -0.46
NCL-202ENST00000356936 DEFB130BP0DP73 79 aa12.19□□□□□ -0.46
NCL-202ENST00000356936 DEFB130AP0DP74 79 aa12.19□□□□□ -0.46
NCL-202ENST00000356936 RGS21Q2M5E4 152 aa12.19□□□□□ -0.46
NCL-202ENST00000356936 TMEM78Q5T7P6 136 aa12.19□□□□□ -0.46
NCL-202ENST00000356936 FAM122CQ6P4D5 195 aa12.19□□□□□ -0.46
NCL-202ENST00000356936 C9orf47Q6ZRZ4 202 aa12.19□□□□□ -0.46
NCL-202ENST00000356936 RNASE8Q8TDE3 154 aaKnown RBP12.19□□□□□ -0.46
NCL-202ENST00000356936 PYGO2Q9BRQ0 406 aa12.19□□□□□ -0.46
NCL-202ENST00000356936 ALMS1Q8TCU4 4167 aa12.19□□□□□ -0.46
NCL-202ENST00000356936 DNAH1Q9P2D7 4330 aa12.18□□□□□ -0.46
NCL-202ENST00000356936 J3KRW8 73 aa12.18□□□□□ -0.46
NCL-202ENST00000356936 NMBP08949 121 aa12.18□□□□□ -0.46
NCL-202ENST00000356936 M6PRP20645 277 aa12.18□□□□□ -0.46
NCL-202ENST00000356936 CSN1S1P47710 185 aa12.18□□□□□ -0.46
NCL-202ENST00000356936 UBE2L3P68036 154 aaKnown RBP12.18□□□□□ -0.46
NCL-202ENST00000356936 ERCC8Q13216 396 aa12.18□□□□□ -0.46
NCL-202ENST00000356936 KIR3DS1Q14943 382 aa12.18□□□□□ -0.46
NCL-202ENST00000356936 AQP10Q96PS8 301 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms