RNA–Protein interactions for RNA: ENST00000355379.3

SCAMP3-202, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 1 (best) BASIC

Gene SCAMP3, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-202ENST00000355379 SMPXQ9UHP9 88 aa17.42■□□□□ 0.38
SCAMP3-202ENST00000355379 A0A1W2PPQ1 181 aa17.42■□□□□ 0.38
SCAMP3-202ENST00000355379 CHEK1O14757 476 aa17.42■□□□□ 0.38
SCAMP3-202ENST00000355379 CDX1P47902 265 aaPredicted RBP17.42■□□□□ 0.38
SCAMP3-202ENST00000355379 LCN12Q6JVE5 192 aa17.42■□□□□ 0.38
SCAMP3-202ENST00000355379 C8orf86Q6ZUL3 223 aa17.42■□□□□ 0.38
SCAMP3-202ENST00000355379 FASNP49327 2511 aaKnown RBP17.41■□□□□ 0.38
SCAMP3-202ENST00000355379 LGALS9O00182 355 aa17.41■□□□□ 0.38
SCAMP3-202ENST00000355379 GATCO43716 136 aaKnown RBP17.41■□□□□ 0.38
SCAMP3-202ENST00000355379 FAM3BP58499 235 aaPredicted RBP17.41■□□□□ 0.38
SCAMP3-202ENST00000355379 TM4SF20Q53R12 229 aa17.41■□□□□ 0.38
SCAMP3-202ENST00000355379 NUDT10Q8NFP7 164 aa17.41■□□□□ 0.38
SCAMP3-202ENST00000355379 NUDT11Q96G61 164 aa17.41■□□□□ 0.38
SCAMP3-202ENST00000355379 C16orf95Q9H693 158 aa17.41■□□□□ 0.38
SCAMP3-202ENST00000355379 TRAV8-2A0A0B4J237 113 aa17.4■□□□□ 0.38
SCAMP3-202ENST00000355379 LOC105371267A0A1B0GV96 52 aa17.4■□□□□ 0.38
SCAMP3-202ENST00000355379 BMI1P35226 326 aa17.4■□□□□ 0.38
SCAMP3-202ENST00000355379 HILS1P60008 231 aa17.4■□□□□ 0.38
SCAMP3-202ENST00000355379 WIPF2Q8TF74 440 aaPredicted RBP17.4■□□□□ 0.38
SCAMP3-202ENST00000355379 WFDC12Q8WWY7 111 aa17.4■□□□□ 0.38
SCAMP3-202ENST00000355379 RHPN1-AS1Q9BWJ2 59 aa17.4■□□□□ 0.38
SCAMP3-202ENST00000355379 IGHV4OR15-8A0A075B7B6 117 aa17.39■□□□□ 0.37
SCAMP3-202ENST00000355379 A0A087WW49 117 aa17.39■□□□□ 0.37
SCAMP3-202ENST00000355379 RBAKDNA6NC62 111 aa17.39■□□□□ 0.37
SCAMP3-202ENST00000355379 C19orf71A6NCJ1 209 aa17.39■□□□□ 0.37
SCAMP3-202ENST00000355379 ZNF705GA8MUZ8 300 aaPredicted RBP17.39■□□□□ 0.37
SCAMP3-202ENST00000355379 A8MWP6 167 aa17.39■□□□□ 0.37
SCAMP3-202ENST00000355379 HLA-DMBP28068 263 aa17.39■□□□□ 0.37
SCAMP3-202ENST00000355379 IGFL4Q6B9Z1 124 aa17.39■□□□□ 0.37
SCAMP3-202ENST00000355379 FOSL1P15407 271 aa17.38■□□□□ 0.37
SCAMP3-202ENST00000355379 SMIM27A0A1W2PRY6 76 aa17.37■□□□□ 0.37
SCAMP3-202ENST00000355379 PRR27Q6MZM9 219 aa17.37■□□□□ 0.37
SCAMP3-202ENST00000355379 COX8CQ7Z4L0 72 aa17.37■□□□□ 0.37
SCAMP3-202ENST00000355379 C4orf3Q8WVX3 66 aa17.37■□□□□ 0.37
SCAMP3-202ENST00000355379 JMJD8Q96S16 334 aa17.37■□□□□ 0.37
SCAMP3-202ENST00000355379 HECTD1Q9ULT8 2610 aa17.37■□□□□ 0.37
SCAMP3-202ENST00000355379 IGKV2-40A0A087WW87 121 aaPredicted RBP17.37■□□□□ 0.37
SCAMP3-202ENST00000355379 IGKV2D-40P01614 121 aaPredicted RBP17.37■□□□□ 0.37
SCAMP3-202ENST00000355379 TCTEX1D4Q5JR98 221 aa17.37■□□□□ 0.37
SCAMP3-202ENST00000355379 SAPCD1Q5SSQ6 148 aa17.37■□□□□ 0.37
SCAMP3-202ENST00000355379 C16orf92Q96LL3 132 aa17.37■□□□□ 0.37
SCAMP3-202ENST00000355379 ZNF705FA8MVS1 300 aaPredicted RBP17.36■□□□□ 0.37
SCAMP3-202ENST00000355379 CT83Q5H943 113 aa17.36■□□□□ 0.37
SCAMP3-202ENST00000355379 ZFP82Q8N141 532 aa17.36■□□□□ 0.37
SCAMP3-202ENST00000355379 GBGT1Q8N5D6 347 aa17.36■□□□□ 0.37
SCAMP3-202ENST00000355379 TLN2Q9Y4G6 2542 aa17.36■□□□□ 0.37
SCAMP3-202ENST00000355379 TMEM213A2RRL7 107 aa17.35■□□□□ 0.37
SCAMP3-202ENST00000355379 SOCS3O14543 225 aa17.35■□□□□ 0.37
SCAMP3-202ENST00000355379 RPL19P84098 196 aaKnown RBP17.35■□□□□ 0.37
SCAMP3-202ENST00000355379 LINC00322Q6ZN03 302 aaPredicted RBP17.35■□□□□ 0.37
SCAMP3-202ENST00000355379 RNF182Q8N6D2 247 aa17.35■□□□□ 0.37
SCAMP3-202ENST00000355379 DAZAP1Q96EP5 407 aaKnown RBP17.35■□□□□ 0.37
SCAMP3-202ENST00000355379 NRN1Q9NPD7 142 aa17.35■□□□□ 0.37
SCAMP3-202ENST00000355379 NPIPB6E9PJ23 425 aa17.34■□□□□ 0.37
SCAMP3-202ENST00000355379 TRGC2P03986 189 aa17.34■□□□□ 0.37
SCAMP3-202ENST00000355379 HOXD3P31249 432 aaPredicted RBP17.34■□□□□ 0.37
SCAMP3-202ENST00000355379 SAMD13Q5VXD3 122 aa17.34■□□□□ 0.37
SCAMP3-202ENST00000355379 OR4B1Q8NGF8 309 aa17.34■□□□□ 0.37
SCAMP3-202ENST00000355379 ZC2HC1AQ96GY0 325 aa17.34■□□□□ 0.37
SCAMP3-202ENST00000355379 RPP21Q9H633 154 aaKnown RBP17.34■□□□□ 0.37
SCAMP3-202ENST00000355379 P01737 135 aa17.33■□□□□ 0.37
SCAMP3-202ENST00000355379 KLF5Q13887 457 aaPredicted RBP17.33■□□□□ 0.37
SCAMP3-202ENST00000355379 PRR25Q96S07 402 aa17.33■□□□□ 0.37
SCAMP3-202ENST00000355379 VGLL1Q99990 258 aa17.33■□□□□ 0.37
SCAMP3-202ENST00000355379 MYO9AB2RTY4 2548 aa17.33■□□□□ 0.36
SCAMP3-202ENST00000355379 PRAC2D3DTV9 90 aa17.32■□□□□ 0.36
SCAMP3-202ENST00000355379 LINC01619G3V211 115 aa17.32■□□□□ 0.36
SCAMP3-202ENST00000355379 NDUFA7O95182 113 aa17.32■□□□□ 0.36
SCAMP3-202ENST00000355379 TCF24Q7RTU0 167 aa17.32■□□□□ 0.36
SCAMP3-202ENST00000355379 TSKUQ8WUA8 353 aa17.32■□□□□ 0.36
SCAMP3-202ENST00000355379 ACANP16112 2415 aa17.32■□□□□ 0.36
SCAMP3-202ENST00000355379 SONP18583 2426 aaKnown RBP17.32■□□□□ 0.36
SCAMP3-202ENST00000355379 PHOX2AO14813 284 aa17.31■□□□□ 0.36
SCAMP3-202ENST00000355379 SYNJ2BPP57105 145 aa17.31■□□□□ 0.36
SCAMP3-202ENST00000355379 C18orf65Q6ZTR6 163 aa17.31■□□□□ 0.36
SCAMP3-202ENST00000355379 IZUMO1RA6ND01 250 aa17.31■□□□□ 0.36
SCAMP3-202ENST00000355379 A8MWL6 223 aa17.31■□□□□ 0.36
SCAMP3-202ENST00000355379 LINC01006Q8NI28 216 aa17.31■□□□□ 0.36
SCAMP3-202ENST00000355379 NDFIP1Q9BT67 221 aa17.31■□□□□ 0.36
SCAMP3-202ENST00000355379 PPP1R14DQ9NXH3 145 aa17.31■□□□□ 0.36
SCAMP3-202ENST00000355379 CT45A10P0DMU9 189 aa17.3■□□□□ 0.36
SCAMP3-202ENST00000355379 PRB4P10163 310 aaPredicted RBP17.3■□□□□ 0.36
SCAMP3-202ENST00000355379 EDN2P20800 178 aa17.3■□□□□ 0.36
SCAMP3-202ENST00000355379 C9orf47Q6ZRZ4 202 aa17.3■□□□□ 0.36
SCAMP3-202ENST00000355379 Q71RC1 249 aaPredicted RBP17.3■□□□□ 0.36
SCAMP3-202ENST00000355379 DPF1Q92782 380 aa17.3■□□□□ 0.36
SCAMP3-202ENST00000355379 C8orf49Q96NF6 230 aa17.3■□□□□ 0.36
SCAMP3-202ENST00000355379 FAM231BA6NCW3 169 aa17.29■□□□□ 0.36
SCAMP3-202ENST00000355379 CA1P00915 261 aaPredicted RBP17.29■□□□□ 0.36
SCAMP3-202ENST00000355379 CRIP1P50238 77 aa17.29■□□□□ 0.36
SCAMP3-202ENST00000355379 RPL11P62913 178 aaKnown RBP17.29■□□□□ 0.36
SCAMP3-202ENST00000355379 COX19Q49B96 90 aa17.29■□□□□ 0.36
SCAMP3-202ENST00000355379 ACTL10Q5JWF8 245 aa17.29■□□□□ 0.36
SCAMP3-202ENST00000355379 OR1N2Q8NGR9 330 aa17.29■□□□□ 0.36
SCAMP3-202ENST00000355379 GFRA4Q9GZZ7 299 aa17.29■□□□□ 0.36
SCAMP3-202ENST00000355379 NAT8BQ9UHF3 227 aa17.29■□□□□ 0.36
SCAMP3-202ENST00000355379 C2orf70A6NJV1 201 aa17.28■□□□□ 0.36
SCAMP3-202ENST00000355379 OVOL1O14753 267 aa17.28■□□□□ 0.36
SCAMP3-202ENST00000355379 KLHL30-AS1Q8NEE0 82 aa17.28■□□□□ 0.36
SCAMP3-202ENST00000355379 OR11H1Q8NG94 326 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms