RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 PAX8Q06710 450 aa17.29■□□□□ 0.36
NKX2-1-201ENST00000354822 EEF1AKMT3Q96AZ1 226 aa17.29■□□□□ 0.36
NKX2-1-201ENST00000354822 TMEM70Q9BUB7 260 aa17.29■□□□□ 0.36
NKX2-1-201ENST00000354822 A0A087X0K7 114 aa17.28■□□□□ 0.36
NKX2-1-201ENST00000354822 TRBV7-1A0A0A6YYK4 115 aa17.28■□□□□ 0.36
NKX2-1-201ENST00000354822 BMI1P35226 326 aa17.28■□□□□ 0.36
NKX2-1-201ENST00000354822 RPS20P60866 119 aaKnown RBP17.28■□□□□ 0.36
NKX2-1-201ENST00000354822 ZNF493Q6ZR52 646 aa17.28■□□□□ 0.36
NKX2-1-201ENST00000354822 ZFAND3Q9H8U3 227 aa17.28■□□□□ 0.36
NKX2-1-201ENST00000354822 IGKV2-40A0A087WW87 121 aaPredicted RBP17.28■□□□□ 0.36
NKX2-1-201ENST00000354822 SH2D1AO60880 128 aa17.28■□□□□ 0.36
NKX2-1-201ENST00000354822 IGKV2D-40P01614 121 aaPredicted RBP17.28■□□□□ 0.36
NKX2-1-201ENST00000354822 IGHV4-39P01824 125 aa17.28■□□□□ 0.36
NKX2-1-201ENST00000354822 C5orf56Q8N8D9 126 aa17.28■□□□□ 0.36
NKX2-1-201ENST00000354822 PKD1L2Q7Z442 2459 aa17.27■□□□□ 0.36
NKX2-1-201ENST00000354822 CRXO43186 299 aaPredicted RBP17.27■□□□□ 0.36
NKX2-1-201ENST00000354822 BUB3O43684 328 aa17.27■□□□□ 0.36
NKX2-1-201ENST00000354822 PRR31Q5SQ13 230 aa17.27■□□□□ 0.36
NKX2-1-201ENST00000354822 IGHV1-24A0A0C4DH33 117 aa17.26■□□□□ 0.35
NKX2-1-201ENST00000354822 ATP6V0BQ99437 205 aa17.26■□□□□ 0.35
NKX2-1-201ENST00000354822 LEPROTL1O95214 131 aa17.26■□□□□ 0.35
NKX2-1-201ENST00000354822 RNF224P0DH78 156 aa17.26■□□□□ 0.35
NKX2-1-201ENST00000354822 IGLC3P0DOY3 106 aa17.26■□□□□ 0.35
NKX2-1-201ENST00000354822 LCN12Q6JVE5 192 aa17.26■□□□□ 0.35
NKX2-1-201ENST00000354822 TRAV9-2A0A087WT02 112 aa17.25■□□□□ 0.35
NKX2-1-201ENST00000354822 IGHG4P01861 327 aa17.25■□□□□ 0.35
NKX2-1-201ENST00000354822 G3V318 75 aa17.25■□□□□ 0.35
NKX2-1-201ENST00000354822 SRSF2Q01130 221 aaKnown RBP17.25■□□□□ 0.35
NKX2-1-201ENST00000354822 PIMREGQ9BSJ6 248 aa17.25■□□□□ 0.35
NKX2-1-201ENST00000354822 TPPP3Q9BW30 176 aa17.25■□□□□ 0.35
NKX2-1-201ENST00000354822 MOB4Q9Y3A3 225 aa17.25■□□□□ 0.35
NKX2-1-201ENST00000354822 IGHV3-35A0A0C4DH35 117 aa17.24■□□□□ 0.35
NKX2-1-201ENST00000354822 M0QZ24 198 aa17.24■□□□□ 0.35
NKX2-1-201ENST00000354822 PRB4P10163 310 aaPredicted RBP17.24■□□□□ 0.35
NKX2-1-201ENST00000354822 LYZL1Q6UWQ5 148 aa17.24■□□□□ 0.35
NKX2-1-201ENST00000354822 CLEC19AQ6UXS0 136 aa17.24■□□□□ 0.35
NKX2-1-201ENST00000354822 CCDC140Q96MF4 163 aa17.24■□□□□ 0.35
NKX2-1-201ENST00000354822 SLC50A1Q9BRV3 221 aa17.24■□□□□ 0.35
NKX2-1-201ENST00000354822 MED13LQ71F56 2210 aa17.23■□□□□ 0.35
NKX2-1-201ENST00000354822 IGHV1-69DA0A0B4J2H0 117 aa17.23■□□□□ 0.35
NKX2-1-201ENST00000354822 RBAKDNA6NC62 111 aa17.23■□□□□ 0.35
NKX2-1-201ENST00000354822 LINC01548A6NM66 108 aa17.23■□□□□ 0.35
NKX2-1-201ENST00000354822 IGHV1-69P01742 117 aa17.23■□□□□ 0.35
NKX2-1-201ENST00000354822 VGLL1Q99990 258 aa17.23■□□□□ 0.35
NKX2-1-201ENST00000354822 CLEC5AQ9NY25 188 aa17.23■□□□□ 0.35
NKX2-1-201ENST00000354822 ATP5G2Q06055 141 aa17.22■□□□□ 0.35
NKX2-1-201ENST00000354822 IGHV3OR16-8A0A075B7F1 116 aa17.22■□□□□ 0.35
NKX2-1-201ENST00000354822 NDUFS8O00217 210 aa17.22■□□□□ 0.35
NKX2-1-201ENST00000354822 METTL26Q96S19 204 aa17.22■□□□□ 0.35
NKX2-1-201ENST00000354822 HSPB8Q9UJY1 196 aa17.22■□□□□ 0.35
NKX2-1-201ENST00000354822 CLPSL1A2RUU4 121 aa17.21■□□□□ 0.35
NKX2-1-201ENST00000354822 SYS1-DBNDD2H3BUS1 97 aa17.21■□□□□ 0.35
NKX2-1-201ENST00000354822 TCAPO15273 167 aa17.21■□□□□ 0.35
NKX2-1-201ENST00000354822 CRIP2P52943 208 aaPredicted RBP17.21■□□□□ 0.35
NKX2-1-201ENST00000354822 ATOH7Q8N100 152 aa17.21■□□□□ 0.35
NKX2-1-201ENST00000354822 MEGF9Q9H1U4 602 aa17.21■□□□□ 0.35
NKX2-1-201ENST00000354822 TMSB15BA0A087X1C1 80 aa17.2■□□□□ 0.34
NKX2-1-201ENST00000354822 FAM223BA6NKX1 122 aa17.2■□□□□ 0.34
NKX2-1-201ENST00000354822 RPLP1P05386 114 aaKnown RBP17.2■□□□□ 0.34
NKX2-1-201ENST00000354822 IGFL4Q6B9Z1 124 aa17.2■□□□□ 0.34
NKX2-1-201ENST00000354822 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.2■□□□□ 0.34
NKX2-1-201ENST00000354822 FAM223AQ8IWN6 122 aa17.2■□□□□ 0.34
NKX2-1-201ENST00000354822 MAP1LC3CQ9BXW4 147 aa17.2■□□□□ 0.34
NKX2-1-201ENST00000354822 AP5S1Q9NUS5 200 aa17.2■□□□□ 0.34
NKX2-1-201ENST00000354822 TRAV41A0A0B4J266 112 aa17.19■□□□□ 0.34
NKX2-1-201ENST00000354822 FABP5P3A8MUU1 101 aa17.19■□□□□ 0.34
NKX2-1-201ENST00000354822 HLA-DMBP28068 263 aa17.19■□□□□ 0.34
NKX2-1-201ENST00000354822 FAM104BQ5XKR9 115 aa17.19■□□□□ 0.34
NKX2-1-201ENST00000354822 Q6ZN92 141 aa17.19■□□□□ 0.34
NKX2-1-201ENST00000354822 CCL19Q99731 98 aa17.19■□□□□ 0.34
NKX2-1-201ENST00000354822 FER1L6-AS1Q8NA97 138 aa17.19■□□□□ 0.34
NKX2-1-201ENST00000354822 PRSS3P2Q8NHM4 247 aa17.19■□□□□ 0.34
NKX2-1-201ENST00000354822 Q8TAT8 98 aa17.19■□□□□ 0.34
NKX2-1-201ENST00000354822 U3KQK5 164 aa17.19■□□□□ 0.34
NKX2-1-201ENST00000354822 HNRNPA3P51991 378 aaKnown RBP17.18■□□□□ 0.34
NKX2-1-201ENST00000354822 ZNF138P52744 262 aa17.18■□□□□ 0.34
NKX2-1-201ENST00000354822 PET117Q6UWS5 81 aa17.18■□□□□ 0.34
NKX2-1-201ENST00000354822 C10orf105Q8TEF2 133 aa17.18■□□□□ 0.34
NKX2-1-201ENST00000354822 CSN3P07498 182 aa17.18■□□□□ 0.34
NKX2-1-201ENST00000354822 ZNF80P51504 273 aaPredicted RBP17.18■□□□□ 0.34
NKX2-1-201ENST00000354822 C19orf54Q5BKX5 351 aa17.18■□□□□ 0.34
NKX2-1-201ENST00000354822 FA2HQ7L5A8 372 aa17.18■□□□□ 0.34
NKX2-1-201ENST00000354822 TMEM219Q86XT9 240 aa17.18■□□□□ 0.34
NKX2-1-201ENST00000354822 PIFOQ8TCI5 191 aa17.18■□□□□ 0.34
NKX2-1-201ENST00000354822 MRPL53Q96EL3 112 aaKnown RBP17.18■□□□□ 0.34
NKX2-1-201ENST00000354822 IGHV4-61A0A0C4DH41 118 aa17.17■□□□□ 0.34
NKX2-1-201ENST00000354822 OR4C46A6NHA9 309 aa17.17■□□□□ 0.34
NKX2-1-201ENST00000354822 TMEM191AQ9H0A3 160 aa17.17■□□□□ 0.34
NKX2-1-201ENST00000354822 U3KQE9 123 aa17.17■□□□□ 0.34
NKX2-1-201ENST00000354822 IGLC6P0CF74 106 aa17.16■□□□□ 0.34
NKX2-1-201ENST00000354822 HIF1ANQ9NWT6 349 aa17.16■□□□□ 0.34
NKX2-1-201ENST00000354822 TMEM213A2RRL7 107 aa17.16■□□□□ 0.34
NKX2-1-201ENST00000354822 MAJINQ3KP22 176 aa17.16■□□□□ 0.34
NKX2-1-201ENST00000354822 CLEC2AQ6UVW9 174 aa17.16■□□□□ 0.34
NKX2-1-201ENST00000354822 ORMDL3Q8N138 153 aa17.16■□□□□ 0.34
NKX2-1-201ENST00000354822 MRPS16Q9Y3D3 137 aaKnown RBP17.16■□□□□ 0.34
NKX2-1-201ENST00000354822 IGLL1P15814 213 aa17.15■□□□□ 0.34
NKX2-1-201ENST00000354822 SPATA12Q7Z6I5 190 aa17.15■□□□□ 0.34
NKX2-1-201ENST00000354822 LINC00173Q6ZV60 143 aa17.15■□□□□ 0.34
NKX2-1-201ENST00000354822 OR10AG1Q8NH19 301 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 176.4 ms