RNA–Protein interactions for RNA: ENST00000354363.10

PRPF40A-201, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 1,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-201ENST00000354363 L7N2F9 121 aa10.06□□□□□ -0.8
PRPF40A-201ENST00000354363 VAMP2P63027 116 aa10.06□□□□□ -0.8
PRPF40A-201ENST00000354363 OR5I1Q13606 314 aa10.06□□□□□ -0.8
PRPF40A-201ENST00000354363 CCDC28AQ8IWP9 274 aa10.06□□□□□ -0.8
PRPF40A-201ENST00000354363 C20orf85Q9H1P6 137 aa10.06□□□□□ -0.8
PRPF40A-201ENST00000354363 DNAJC4Q9NNZ3 241 aa10.06□□□□□ -0.8
PRPF40A-201ENST00000354363 LSM5Q9Y4Y9 91 aaKnown RBP10.06□□□□□ -0.8
PRPF40A-201ENST00000354363 TRAV26-1A0A087WT03 109 aa10.05□□□□□ -0.8
PRPF40A-201ENST00000354363 CT45A10P0DMU9 189 aa10.05□□□□□ -0.8
PRPF40A-201ENST00000354363 CAMLGP49069 296 aa10.05□□□□□ -0.8
PRPF40A-201ENST00000354363 ZNF846Q147U1 533 aa10.05□□□□□ -0.8
PRPF40A-201ENST00000354363 MIC13Q5XKP0 118 aa10.05□□□□□ -0.8
PRPF40A-201ENST00000354363 NRARPQ7Z6K4 114 aa10.05□□□□□ -0.8
PRPF40A-201ENST00000354363 RXFP4Q8TDU9 374 aa10.05□□□□□ -0.8
PRPF40A-201ENST00000354363 GNPNAT1Q96EK6 184 aaPredicted RBP10.05□□□□□ -0.8
PRPF40A-201ENST00000354363 C11orf1Q9H5F2 150 aa10.05□□□□□ -0.8
PRPF40A-201ENST00000354363 TRAV5A0A0B4J249 113 aa10.04□□□□□ -0.8
PRPF40A-201ENST00000354363 J3KRW8 73 aa10.04□□□□□ -0.8
PRPF40A-201ENST00000354363 PLA2G10O15496 165 aa10.04□□□□□ -0.8
PRPF40A-201ENST00000354363 HOXA5P20719 270 aa10.04□□□□□ -0.8
PRPF40A-201ENST00000354363 BCAP31P51572 246 aa10.04□□□□□ -0.8
PRPF40A-201ENST00000354363 RAB31Q13636 194 aa10.04□□□□□ -0.8
PRPF40A-201ENST00000354363 Q6ZRG5 221 aa10.04□□□□□ -0.8
PRPF40A-201ENST00000354363 ODF3Q96PU9 254 aa10.04□□□□□ -0.8
PRPF40A-201ENST00000354363 Q9H8V8 135 aa10.04□□□□□ -0.8
PRPF40A-201ENST00000354363 A0A0J9YY99 117 aa10.04□□□□□ -0.8
PRPF40A-201ENST00000354363 GAGE12BA1L429 117 aa10.04□□□□□ -0.8
PRPF40A-201ENST00000354363 FAM24AA6NFZ4 105 aa10.04□□□□□ -0.8
PRPF40A-201ENST00000354363 FAM25EA8MYX2 175 aa10.04□□□□□ -0.8
PRPF40A-201ENST00000354363 SNURFLB1AK76 121 aa10.04□□□□□ -0.8
PRPF40A-201ENST00000354363 NPIPB6E9PJ23 425 aa10.04□□□□□ -0.8
PRPF40A-201ENST00000354363 GAGE7O76087 117 aa10.04□□□□□ -0.8
PRPF40A-201ENST00000354363 CST7O76096 145 aa10.04□□□□□ -0.8
PRPF40A-201ENST00000354363 RLN2P04090 185 aa10.04□□□□□ -0.8
PRPF40A-201ENST00000354363 GAGE12FP0CL80 117 aa10.04□□□□□ -0.8
PRPF40A-201ENST00000354363 GAGE12GP0CL81 117 aa10.04□□□□□ -0.8
PRPF40A-201ENST00000354363 GAGE12IP0CL82 117 aa10.04□□□□□ -0.8
PRPF40A-201ENST00000354363 M6PRP20645 277 aa10.04□□□□□ -0.8
PRPF40A-201ENST00000354363 LEPP41159 167 aa10.04□□□□□ -0.8
PRPF40A-201ENST00000354363 ZNF431Q8TF32 576 aaPredicted RBP10.04□□□□□ -0.8
PRPF40A-201ENST00000354363 ZNF503Q96F45 646 aa10.04□□□□□ -0.8
PRPF40A-201ENST00000354363 ZNF586Q9NXT0 402 aa10.04□□□□□ -0.8
PRPF40A-201ENST00000354363 WDR83OSQ9Y284 106 aa10.04□□□□□ -0.8
PRPF40A-201ENST00000354363 TRAV12-3A0A0B4J271 114 aa10.03□□□□□ -0.8
PRPF40A-201ENST00000354363 CDK2AP2O75956 126 aa10.03□□□□□ -0.8
PRPF40A-201ENST00000354363 CAV2P51636 162 aa10.03□□□□□ -0.8
PRPF40A-201ENST00000354363 GUK1Q16774 197 aa10.03□□□□□ -0.8
PRPF40A-201ENST00000354363 OR1L4Q8NGR5 311 aa10.03□□□□□ -0.8
PRPF40A-201ENST00000354363 KRTAP1-5Q9BYS1 174 aa10.03□□□□□ -0.8
PRPF40A-201ENST00000354363 UQCC1Q9NVA1 299 aa10.03□□□□□ -0.8
PRPF40A-201ENST00000354363 C5orf51A6NDU8 294 aa10.02□□□□□ -0.81
PRPF40A-201ENST00000354363 LYRM1O43325 122 aa10.02□□□□□ -0.81
PRPF40A-201ENST00000354363 TCRBP04435 133 aa10.02□□□□□ -0.81
PRPF40A-201ENST00000354363 VWC2Q2TAL6 325 aa10.02□□□□□ -0.81
PRPF40A-201ENST00000354363 PFDN5Q99471 154 aa10.02□□□□□ -0.81
PRPF40A-201ENST00000354363 SEC22CQ9BRL7 303 aa10.02□□□□□ -0.81
PRPF40A-201ENST00000354363 PYGO2Q9BRQ0 406 aa10.02□□□□□ -0.81
PRPF40A-201ENST00000354363 APOBP04114 4563 aaKnown RBP10.01□□□□□ -0.81
PRPF40A-201ENST00000354363 TRAV6A0A075B6T7 132 aa10.01□□□□□ -0.81
PRPF40A-201ENST00000354363 H3BNG1 76 aa10.01□□□□□ -0.81
PRPF40A-201ENST00000354363 ZNF253O75346 499 aa10.01□□□□□ -0.81
PRPF40A-201ENST00000354363 RPL29P47914 159 aaKnown RBP10.01□□□□□ -0.81
PRPF40A-201ENST00000354363 ESRGQ1W209 222 aa10.01□□□□□ -0.81
PRPF40A-201ENST00000354363 C2orf50Q96LR7 162 aa10.01□□□□□ -0.81
PRPF40A-201ENST00000354363 UPK3BQ9BT76 320 aa10.01□□□□□ -0.81
PRPF40A-201ENST00000354363 SLC39A9Q9NUM3 307 aa10.01□□□□□ -0.81
PRPF40A-201ENST00000354363 UBE2L5PA0A1B0GUS4 154 aa10□□□□□ -0.81
PRPF40A-201ENST00000354363 DAZ2Q13117 558 aaKnown RBP10□□□□□ -0.81
PRPF40A-201ENST00000354363 TTC32Q5I0X7 151 aa10□□□□□ -0.81
PRPF40A-201ENST00000354363 Q6ZTI0 123 aa10□□□□□ -0.81
PRPF40A-201ENST00000354363 MRPL53Q96EL3 112 aaKnown RBP10□□□□□ -0.81
PRPF40A-201ENST00000354363 Q9H3A6 140 aa10□□□□□ -0.81
PRPF40A-201ENST00000354363 TMPRSS5Q9H3S3 457 aa10□□□□□ -0.81
PRPF40A-201ENST00000354363 DNAH5Q8TE73 4624 aa10□□□□□ -0.81
PRPF40A-201ENST00000354363 TRBV19A0A075B6N1 114 aa10□□□□□ -0.81
PRPF40A-201ENST00000354363 IGSF23A1L1A6 192 aa10□□□□□ -0.81
PRPF40A-201ENST00000354363 M0R3E3 92 aa10□□□□□ -0.81
PRPF40A-201ENST00000354363 SLC25A5P05141 298 aaKnown RBP10□□□□□ -0.81
PRPF40A-201ENST00000354363 PVALBP20472 110 aaPredicted RBP10□□□□□ -0.81
PRPF40A-201ENST00000354363 SULT1A1P50225 295 aa10□□□□□ -0.81
PRPF40A-201ENST00000354363 BAXQ07812 192 aa10□□□□□ -0.81
PRPF40A-201ENST00000354363 ERCC8Q13216 396 aa10□□□□□ -0.81
PRPF40A-201ENST00000354363 C12orf45Q8N5I9 185 aaPredicted RBP10□□□□□ -0.81
PRPF40A-201ENST00000354363 CHAC2Q8WUX2 184 aa10□□□□□ -0.81
PRPF40A-201ENST00000354363 LYRM2Q9NU23 88 aaPredicted RBP10□□□□□ -0.81
PRPF40A-201ENST00000354363 NUDT15Q9NV35 164 aa10□□□□□ -0.81
PRPF40A-201ENST00000354363 MRPS16Q9Y3D3 137 aaKnown RBP10□□□□□ -0.81
PRPF40A-201ENST00000354363 C7orf71A4D174 169 aa9.99□□□□□ -0.81
PRPF40A-201ENST00000354363 NDUFB4O95168 129 aa9.99□□□□□ -0.81
PRPF40A-201ENST00000354363 S100A11P31949 105 aa9.99□□□□□ -0.81
PRPF40A-201ENST00000354363 S100A10P60903 97 aa9.99□□□□□ -0.81
PRPF40A-201ENST00000354363 IL15RAQ13261 267 aa9.99□□□□□ -0.81
PRPF40A-201ENST00000354363 SPATA12Q7Z6I5 190 aa9.99□□□□□ -0.81
PRPF40A-201ENST00000354363 TMEM252Q8N6L7 170 aa9.99□□□□□ -0.81
PRPF40A-201ENST00000354363 C11orf72Q8NBR9 251 aa9.99□□□□□ -0.81
PRPF40A-201ENST00000354363 TMEM14CQ9P0S9 112 aa9.99□□□□□ -0.81
PRPF40A-201ENST00000354363 A0A1W2PPQ1 181 aa9.98□□□□□ -0.81
PRPF40A-201ENST00000354363 KLLNB2CW77 178 aa9.98□□□□□ -0.81
PRPF40A-201ENST00000354363 HIST1H1EP10412 219 aaKnown RBP9.98□□□□□ -0.81
PRPF40A-201ENST00000354363 FGF7P21781 194 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms