RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 NDUFS6O75380 124 aaKnown RBP12.84□□□□□ -0.35
PTPN11-201ENST00000351677 LINC01559Q495D7 138 aa12.84□□□□□ -0.35
PTPN11-201ENST00000351677 TEX36Q5VZQ5 186 aa12.84□□□□□ -0.35
PTPN11-201ENST00000351677 TMEM75Q8N9X5 138 aa12.84□□□□□ -0.35
PTPN11-201ENST00000351677 DAZ1Q9NQZ3 744 aaKnown RBP12.84□□□□□ -0.35
PTPN11-201ENST00000351677 ABCA1O95477 2261 aa12.84□□□□□ -0.35
PTPN11-201ENST00000351677 CACNA1HO95180 2353 aa12.83□□□□□ -0.36
PTPN11-201ENST00000351677 ZNF415Q09FC8 603 aa12.83□□□□□ -0.36
PTPN11-201ENST00000351677 Q0VG73 95 aa12.83□□□□□ -0.36
PTPN11-201ENST00000351677 FAM110DQ8TAY7 271 aaPredicted RBP12.83□□□□□ -0.36
PTPN11-201ENST00000351677 C18orf32Q8TCD1 76 aa12.83□□□□□ -0.36
PTPN11-201ENST00000351677 POLR3KQ9Y2Y1 108 aaPredicted RBP12.83□□□□□ -0.36
PTPN11-201ENST00000351677 C10orf91Q5T1B1 145 aa12.83□□□□□ -0.36
PTPN11-201ENST00000351677 ZC2HC1BQ5TFG8 222 aa12.83□□□□□ -0.36
PTPN11-201ENST00000351677 LINC01356Q8N9X3 169 aa12.83□□□□□ -0.36
PTPN11-201ENST00000351677 RNF166Q96A37 237 aaPredicted RBP12.83□□□□□ -0.36
PTPN11-201ENST00000351677 NCOR1P1Q9H4R4 102 aa12.83□□□□□ -0.36
PTPN11-201ENST00000351677 TRBV19A0A075B6N1 114 aa12.83□□□□□ -0.36
PTPN11-201ENST00000351677 PLXNB3Q9ULL4 1909 aa12.83□□□□□ -0.36
PTPN11-201ENST00000351677 TNFRSF6BO95407 300 aa12.82□□□□□ -0.36
PTPN11-201ENST00000351677 NUP210Q8TEM1 1887 aaPredicted RBP12.82□□□□□ -0.36
PTPN11-201ENST00000351677 YPEL3P61236 119 aaPredicted RBP12.82□□□□□ -0.36
PTPN11-201ENST00000351677 STPG4Q8N801 248 aa12.82□□□□□ -0.36
PTPN11-201ENST00000351677 ZNF492Q9P255 531 aa12.82□□□□□ -0.36
PTPN11-201ENST00000351677 DOCK10Q96BY6 2186 aa12.82□□□□□ -0.36
PTPN11-201ENST00000351677 ERG28Q9UKR5 140 aa12.82□□□□□ -0.36
PTPN11-201ENST00000351677 A0A1B0GV72 72 aa12.81□□□□□ -0.36
PTPN11-201ENST00000351677 LINC01549A6NIU2 74 aa12.81□□□□□ -0.36
PTPN11-201ENST00000351677 LINC00158P58513 81 aa12.81□□□□□ -0.36
PTPN11-201ENST00000351677 DLEU1O43261 78 aa12.81□□□□□ -0.36
PTPN11-201ENST00000351677 MSMBP08118 114 aa12.81□□□□□ -0.36
PTPN11-201ENST00000351677 IL15RAQ13261 267 aa12.81□□□□□ -0.36
PTPN11-201ENST00000351677 GAGE13Q4V321 117 aa12.81□□□□□ -0.36
PTPN11-201ENST00000351677 V9GYV3 84 aa12.81□□□□□ -0.36
PTPN11-201ENST00000351677 RNF223E7ERA6 249 aa12.81□□□□□ -0.36
PTPN11-201ENST00000351677 DKK1O94907 266 aa12.81□□□□□ -0.36
PTPN11-201ENST00000351677 TEX43Q6ZNM6 134 aa12.81□□□□□ -0.36
PTPN11-201ENST00000351677 MTURNQ8N3F0 131 aa12.81□□□□□ -0.36
PTPN11-201ENST00000351677 ZNF124Q15973 351 aa12.81□□□□□ -0.36
PTPN11-201ENST00000351677 PHLDA1Q8WV24 401 aaPredicted RBP12.8□□□□□ -0.36
PTPN11-201ENST00000351677 FGF23Q9GZV9 251 aaPredicted RBP12.8□□□□□ -0.36
PTPN11-201ENST00000351677 M0R2P5 195 aa12.8□□□□□ -0.36
PTPN11-201ENST00000351677 SPOCK3Q9BQ16 436 aa12.8□□□□□ -0.36
PTPN11-201ENST00000351677 EREGO14944 169 aa12.8□□□□□ -0.36
PTPN11-201ENST00000351677 SSBP2P81877 361 aaPredicted RBP12.8□□□□□ -0.36
PTPN11-201ENST00000351677 RPL36AP83881 106 aaKnown RBP12.8□□□□□ -0.36
PTPN11-201ENST00000351677 RPL36ALQ969Q0 106 aaKnown RBP12.8□□□□□ -0.36
PTPN11-201ENST00000351677 PRADC1Q9BSG0 188 aa12.8□□□□□ -0.36
PTPN11-201ENST00000351677 SLC25A16P16260 332 aa12.8□□□□□ -0.36
PTPN11-201ENST00000351677 SLAQ13239 276 aa12.8□□□□□ -0.36
PTPN11-201ENST00000351677 IGHV2-70DA0A0C4DH43 119 aa12.79□□□□□ -0.36
PTPN11-201ENST00000351677 A8MWV9 139 aa12.79□□□□□ -0.36
PTPN11-201ENST00000351677 TMEM238C9JI98 176 aa12.79□□□□□ -0.36
PTPN11-201ENST00000351677 LINC00311Q8N616 119 aa12.79□□□□□ -0.36
PTPN11-201ENST00000351677 IGHV1-69DA0A0B4J2H0 117 aa12.79□□□□□ -0.36
PTPN11-201ENST00000351677 IGHV1-69P01742 117 aa12.79□□□□□ -0.36
PTPN11-201ENST00000351677 DEFB131AP59861 70 aa12.79□□□□□ -0.36
PTPN11-201ENST00000351677 PGPEP1Q9NXJ5 209 aa12.79□□□□□ -0.36
PTPN11-201ENST00000351677 C11orf53Q8IXP5 236 aa12.79□□□□□ -0.36
PTPN11-201ENST00000351677 WT1P19544 449 aaPredicted RBP12.78□□□□□ -0.36
PTPN11-201ENST00000351677 KIR3DS1Q14943 382 aa12.78□□□□□ -0.36
PTPN11-201ENST00000351677 SPRNQ5BIV9 151 aa12.78□□□□□ -0.36
PTPN11-201ENST00000351677 MORN3Q6PF18 240 aaPredicted RBP12.78□□□□□ -0.36
PTPN11-201ENST00000351677 A8MWP6 167 aa12.78□□□□□ -0.36
PTPN11-201ENST00000351677 C1orf159Q96HA4 380 aa12.78□□□□□ -0.36
PTPN11-201ENST00000351677 ABCA4P78363 2273 aa12.78□□□□□ -0.36
PTPN11-201ENST00000351677 CRPP02741 224 aa12.78□□□□□ -0.36
PTPN11-201ENST00000351677 KIF26AQ9ULI4 1882 aaPredicted RBP12.77□□□□□ -0.36
PTPN11-201ENST00000351677 INSP01308 110 aa12.77□□□□□ -0.36
PTPN11-201ENST00000351677 PLEKHB2Q96CS7 222 aa12.77□□□□□ -0.36
PTPN11-201ENST00000351677 PRSS46E5RG02 174 aa12.77□□□□□ -0.37
PTPN11-201ENST00000351677 KNCNA6PVL3 124 aa12.77□□□□□ -0.37
PTPN11-201ENST00000351677 FAM104BQ5XKR9 115 aa12.77□□□□□ -0.37
PTPN11-201ENST00000351677 H3BRN7 92 aa12.77□□□□□ -0.37
PTPN11-201ENST00000351677 K7EM74 188 aa12.76□□□□□ -0.37
PTPN11-201ENST00000351677 SPINK13Q1W4C9 94 aa12.76□□□□□ -0.37
PTPN11-201ENST00000351677 NDUFS8O00217 210 aa12.76□□□□□ -0.37
PTPN11-201ENST00000351677 C8orf86Q6ZUL3 223 aa12.76□□□□□ -0.37
PTPN11-201ENST00000351677 CMC4P56277 68 aaPredicted RBP12.76□□□□□ -0.37
PTPN11-201ENST00000351677 CT83Q5H943 113 aa12.76□□□□□ -0.37
PTPN11-201ENST00000351677 Q8NFD4 153 aa12.76□□□□□ -0.37
PTPN11-201ENST00000351677 SHANK1Q9Y566 2161 aa12.76□□□□□ -0.37
PTPN11-201ENST00000351677 SMIM27A0A1W2PRY6 76 aa12.76□□□□□ -0.37
PTPN11-201ENST00000351677 TDGF1P3P51864 188 aa12.76□□□□□ -0.37
PTPN11-201ENST00000351677 SP5Q6BEB4 398 aaPredicted RBP12.76□□□□□ -0.37
PTPN11-201ENST00000351677 Q6ZWC4 215 aa12.76□□□□□ -0.37
PTPN11-201ENST00000351677 FXYD5Q96DB9 178 aa12.76□□□□□ -0.37
PTPN11-201ENST00000351677 A0A087WX48 190 aa12.76□□□□□ -0.37
PTPN11-201ENST00000351677 SPXQ9BT56 116 aa12.76□□□□□ -0.37
PTPN11-201ENST00000351677 CHAC1Q9BUX1 264 aa12.76□□□□□ -0.37
PTPN11-201ENST00000351677 KLK9Q9UKQ9 250 aa12.76□□□□□ -0.37
PTPN11-201ENST00000351677 GTF3C1Q12789 2109 aa12.75□□□□□ -0.37
PTPN11-201ENST00000351677 FAM231BA6NCW3 169 aa12.75□□□□□ -0.37
PTPN11-201ENST00000351677 PIP4P1Q86T03 277 aa12.75□□□□□ -0.37
PTPN11-201ENST00000351677 TRAV26-2A0A0B4J265 109 aa12.75□□□□□ -0.37
PTPN11-201ENST00000351677 FAM120AOSQ5T036 256 aa12.75□□□□□ -0.37
PTPN11-201ENST00000351677 TRAV13-1A0A0B4J241 112 aa12.75□□□□□ -0.37
PTPN11-201ENST00000351677 TRAV8-4A0A0B4J246 113 aa12.75□□□□□ -0.37
PTPN11-201ENST00000351677 SLC25A20O43772 301 aa12.75□□□□□ -0.37
PTPN11-201ENST00000351677 PRR25Q96S07 402 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms