RNA–Protein interactions for RNA: ENST00000348165.9

UBE3C-201, Transcript of ubiquitin protein ligase E3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3C, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-201ENST00000348165 LIME1Q9H400 295 aa15□□□□□ -0.01
UBE3C-201ENST00000348165 POLR3KQ9Y2Y1 108 aaPredicted RBP15□□□□□ -0.01
UBE3C-201ENST00000348165 CHTOPQ9Y3Y2 248 aaKnown RBP15□□□□□ -0.01
UBE3C-201ENST00000348165 ADARB2-AS1A8MUL3 147 aa14.99□□□□□ -0.01
UBE3C-201ENST00000348165 MYO18BQ8IUG5 2567 aa14.99□□□□□ -0.01
UBE3C-201ENST00000348165 MMP23AO75900 390 aa14.99□□□□□ -0.01
UBE3C-201ENST00000348165 C14orf178Q8N769 122 aaPredicted RBP14.99□□□□□ -0.01
UBE3C-201ENST00000348165 A0A087X0K7 114 aa14.99□□□□□ -0.01
UBE3C-201ENST00000348165 NUP35Q8NFH5 326 aa14.99□□□□□ -0.01
UBE3C-201ENST00000348165 TSC2P49815 1807 aa14.99□□□□□ -0.01
UBE3C-201ENST00000348165 OTOGLQ3ZCN5 2332 aa14.98□□□□□ -0.01
UBE3C-201ENST00000348165 CRPP02741 224 aa14.98□□□□□ -0.01
UBE3C-201ENST00000348165 SPINK8P0C7L1 97 aa14.98□□□□□ -0.01
UBE3C-201ENST00000348165 ERCC8Q13216 396 aa14.98□□□□□ -0.01
UBE3C-201ENST00000348165 GATA3P23771 443 aa14.98□□□□□ -0.01
UBE3C-201ENST00000348165 DEFB131AP59861 70 aa14.98□□□□□ -0.01
UBE3C-201ENST00000348165 SHANK2-AS3Q9BTD1 123 aa14.98□□□□□ -0.01
UBE3C-201ENST00000348165 TMEM14BQ9NUH8 114 aa14.98□□□□□ -0.01
UBE3C-201ENST00000348165 LYPD1Q8N2G4 141 aa14.98□□□□□ -0.01
UBE3C-201ENST00000348165 IGHV2-70DA0A0C4DH43 119 aa14.97□□□□□ -0.01
UBE3C-201ENST00000348165 LYL1P12980 280 aa14.97□□□□□ -0.01
UBE3C-201ENST00000348165 WNK1Q9H4A3 2382 aa14.97□□□□□ -0.01
UBE3C-201ENST00000348165 DMRTC2Q8IXT2 367 aaPredicted RBP14.97□□□□□ -0.01
UBE3C-201ENST00000348165 RNF182Q8N6D2 247 aa14.97□□□□□ -0.01
UBE3C-201ENST00000348165 PLXNA4Q9HCM2 1894 aa14.97□□□□□ -0.01
UBE3C-201ENST00000348165 CR1LQ2VPA4 569 aa14.97□□□□□ -0.01
UBE3C-201ENST00000348165 SRSF8Q9BRL6 282 aaKnown RBP14.97□□□□□ -0.01
UBE3C-201ENST00000348165 IGHV4-39P01824 125 aa14.97□□□□□ -0.01
UBE3C-201ENST00000348165 LAGE3Q14657 143 aa14.97□□□□□ -0.01
UBE3C-201ENST00000348165 PRADC1Q9BSG0 188 aa14.97□□□□□ -0.01
UBE3C-201ENST00000348165 SLC25A2Q9BXI2 301 aa14.97□□□□□ -0.01
UBE3C-201ENST00000348165 NDUFA4L2Q9NRX3 87 aa14.97□□□□□ -0.01
UBE3C-201ENST00000348165 NDUFS7O75251 213 aa14.96□□□□□ -0.01
UBE3C-201ENST00000348165 CFHR2P36980 270 aa14.96□□□□□ -0.01
UBE3C-201ENST00000348165 Q71RC1 249 aaPredicted RBP14.96□□□□□ -0.01
UBE3C-201ENST00000348165 BCL6BQ8N143 479 aaPredicted RBP14.96□□□□□ -0.01
UBE3C-201ENST00000348165 MYLKQ15746 1914 aa14.96□□□□□ -0.01
UBE3C-201ENST00000348165 TRAV2A0A0B4J234 112 aa14.96□□□□□ -0.01
UBE3C-201ENST00000348165 RPL36AP83881 106 aaKnown RBP14.96□□□□□ -0.01
UBE3C-201ENST00000348165 RPL36ALQ969Q0 106 aaKnown RBP14.96□□□□□ -0.01
UBE3C-201ENST00000348165 ZNF815PA8K554 130 aa14.96□□□□□ -0.01
UBE3C-201ENST00000348165 IGKCP01834 107 aa14.96□□□□□ -0.01
UBE3C-201ENST00000348165 GRNP28799 593 aaKnown RBP14.96□□□□□ -0.01
UBE3C-201ENST00000348165 C3orf56Q8N813 242 aa14.96□□□□□ -0.01
UBE3C-201ENST00000348165 hDV102S1A0JD36 115 aa14.96□□□□□ -0.02
UBE3C-201ENST00000348165 FAM110DQ8TAY7 271 aaPredicted RBP14.95□□□□□ -0.02
UBE3C-201ENST00000348165 FNDC10F2Z333 226 aa14.95□□□□□ -0.02
UBE3C-201ENST00000348165 ZNF134P52741 427 aa14.95□□□□□ -0.02
UBE3C-201ENST00000348165 IGKV1-39P01597 117 aa14.95□□□□□ -0.02
UBE3C-201ENST00000348165 IGKV1D-39P04432 117 aa14.95□□□□□ -0.02
UBE3C-201ENST00000348165 TCF15Q12870 199 aa14.95□□□□□ -0.02
UBE3C-201ENST00000348165 KIR3DS1Q14943 382 aa14.95□□□□□ -0.02
UBE3C-201ENST00000348165 DPH3P1Q9H4G8 78 aa14.95□□□□□ -0.02
UBE3C-201ENST00000348165 IGHV2-5P01817 119 aa14.94□□□□□ -0.02
UBE3C-201ENST00000348165 DIAPH2-AS1Q14236 149 aa14.94□□□□□ -0.02
UBE3C-201ENST00000348165 ZNF833PQ6ZTB9 187 aa14.94□□□□□ -0.02
UBE3C-201ENST00000348165 RNF114Q9Y508 228 aa14.94□□□□□ -0.02
UBE3C-201ENST00000348165 A0A087WWL8 130 aa14.94□□□□□ -0.02
UBE3C-201ENST00000348165 GUSBP1Q15486 140 aa14.94□□□□□ -0.02
UBE3C-201ENST00000348165 DTX2Q86UW9 622 aa14.94□□□□□ -0.02
UBE3C-201ENST00000348165 J3QKU1 62 aa14.94□□□□□ -0.02
UBE3C-201ENST00000348165 TEX36Q5VZQ5 186 aa14.94□□□□□ -0.02
UBE3C-201ENST00000348165 RNF166Q96A37 237 aaPredicted RBP14.94□□□□□ -0.02
UBE3C-201ENST00000348165 TPSG1Q9NRR2 321 aa14.94□□□□□ -0.02
UBE3C-201ENST00000348165 TECTAO75443 2155 aa14.94□□□□□ -0.02
UBE3C-201ENST00000348165 KIAA1671Q9BY89 1806 aa14.93□□□□□ -0.02
UBE3C-201ENST00000348165 ANKHD1Q8IWZ3 2542 aaKnown RBP14.93□□□□□ -0.02
UBE3C-201ENST00000348165 RBMY1BA6NDE4 496 aaKnown RBP14.93□□□□□ -0.02
UBE3C-201ENST00000348165 RBMY1EA6NEQ0 496 aaKnown RBP14.93□□□□□ -0.02
UBE3C-201ENST00000348165 RBMY1DP0C7P1 496 aaKnown RBP14.93□□□□□ -0.02
UBE3C-201ENST00000348165 RBMY1A1P0DJD3 496 aaKnown RBP14.93□□□□□ -0.02
UBE3C-201ENST00000348165 RBMY1CP0DJD4 496 aa14.93□□□□□ -0.02
UBE3C-201ENST00000348165 SMKR1H3BMG3 65 aa14.93□□□□□ -0.02
UBE3C-201ENST00000348165 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.93□□□□□ -0.02
UBE3C-201ENST00000348165 DEFB130BP0DP73 79 aa14.93□□□□□ -0.02
UBE3C-201ENST00000348165 DEFB130AP0DP74 79 aa14.93□□□□□ -0.02
UBE3C-201ENST00000348165 ADAMTSL5Q6ZMM2 481 aa14.93□□□□□ -0.02
UBE3C-201ENST00000348165 LY96Q9Y6Y9 160 aa14.93□□□□□ -0.02
UBE3C-201ENST00000348165 INSP01308 110 aa14.93□□□□□ -0.02
UBE3C-201ENST00000348165 PAX9P55771 341 aa14.93□□□□□ -0.02
UBE3C-201ENST00000348165 SSBP2P81877 361 aaPredicted RBP14.93□□□□□ -0.02
UBE3C-201ENST00000348165 TMEM190Q8WZ59 177 aa14.93□□□□□ -0.02
UBE3C-201ENST00000348165 FAM90A2PQ658T7 463 aa14.92□□□□□ -0.02
UBE3C-201ENST00000348165 Q86TA4 180 aa14.92□□□□□ -0.02
UBE3C-201ENST00000348165 AMN1Q8IY45 258 aa14.92□□□□□ -0.02
UBE3C-201ENST00000348165 C15orf65H3BRN8 121 aa14.92□□□□□ -0.02
UBE3C-201ENST00000348165 VGLL1Q99990 258 aa14.92□□□□□ -0.02
UBE3C-201ENST00000348165 C1QTNF4Q9BXJ3 329 aa14.92□□□□□ -0.02
UBE3C-201ENST00000348165 LSM4Q9Y4Z0 139 aaKnown RBP14.92□□□□□ -0.02
UBE3C-201ENST00000348165 ARMS2P0C7Q2 107 aa14.91□□□□□ -0.02
UBE3C-201ENST00000348165 PLNP26678 52 aa14.91□□□□□ -0.02
UBE3C-201ENST00000348165 C11orf68Q9H3H3 251 aaKnown RBP14.91□□□□□ -0.02
UBE3C-201ENST00000348165 WT1-ASQ06250 92 aa14.91□□□□□ -0.02
UBE3C-201ENST00000348165 SPANXA1Q9NS26 97 aa14.91□□□□□ -0.02
UBE3C-201ENST00000348165 ANAPC10Q9UM13 185 aa14.91□□□□□ -0.02
UBE3C-201ENST00000348165 C9JQL5 133 aa14.91□□□□□ -0.02
UBE3C-201ENST00000348165 MST1LQ2TV78 715 aa14.91□□□□□ -0.02
UBE3C-201ENST00000348165 XCL2Q9UBD3 114 aa14.91□□□□□ -0.02
UBE3C-201ENST00000348165 PDE6HQ13956 83 aa14.9□□□□□ -0.02
UBE3C-201ENST00000348165 C1orf159Q96HA4 380 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms