RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 IGHV2-5P01817 119 aa5□□□□□ -1.61
PRKDC-202ENST00000338368 Q86TA4 180 aa5□□□□□ -1.61
PRKDC-202ENST00000338368 FABP2P12104 132 aa5□□□□□ -1.61
PRKDC-202ENST00000338368 KLK15Q9H2R5 256 aa5□□□□□ -1.61
PRKDC-202ENST00000338368 F2Z2F3 143 aa5□□□□□ -1.61
PRKDC-202ENST00000338368 C14orf144Q96I85 54 aa5□□□□□ -1.61
PRKDC-202ENST00000338368 IGKV1OR2-108A0A075B7D4 117 aa5□□□□□ -1.61
PRKDC-202ENST00000338368 MUC4Q99102 2169 aa5□□□□□ -1.61
PRKDC-202ENST00000338368 SH2D1AO60880 128 aa5□□□□□ -1.61
PRKDC-202ENST00000338368 FAM74A4Q5TZK3 123 aa5□□□□□ -1.61
PRKDC-202ENST00000338368 RHPN1-AS1Q9BWJ2 59 aa5□□□□□ -1.61
PRKDC-202ENST00000338368 SELENOKQ9Y6D0 94 aa5□□□□□ -1.61
PRKDC-202ENST00000338368 PAX1P15863 534 aa4.99□□□□□ -1.61
PRKDC-202ENST00000338368 FAM120AOSQ5T036 256 aa4.99□□□□□ -1.61
PRKDC-202ENST00000338368 LCN12Q6JVE5 192 aa4.99□□□□□ -1.61
PRKDC-202ENST00000338368 PRRC2AP48634 2157 aaKnown RBP4.99□□□□□ -1.61
PRKDC-202ENST00000338368 FXYD5Q96DB9 178 aa4.99□□□□□ -1.61
PRKDC-202ENST00000338368 INS-IGF2F8WCM5 200 aa4.99□□□□□ -1.61
PRKDC-202ENST00000338368 PATE2Q6UY27 113 aa4.99□□□□□ -1.61
PRKDC-202ENST00000338368 Q8N7P7 452 aa4.99□□□□□ -1.61
PRKDC-202ENST00000338368 NUDT3O95989 172 aa4.99□□□□□ -1.61
PRKDC-202ENST00000338368 C11orf44Q8N8P7 122 aa4.99□□□□□ -1.61
PRKDC-202ENST00000338368 PYGO2Q9BRQ0 406 aa4.99□□□□□ -1.61
PRKDC-202ENST00000338368 MAPK1IP1LQ8NDC0 245 aa4.99□□□□□ -1.61
PRKDC-202ENST00000338368 WFDC12Q8WWY7 111 aa4.99□□□□□ -1.61
PRKDC-202ENST00000338368 IGLV2-23P01705 113 aa4.99□□□□□ -1.61
PRKDC-202ENST00000338368 PLA2G5P39877 138 aa4.99□□□□□ -1.61
PRKDC-202ENST00000338368 LINC01356Q8N9X3 169 aa4.99□□□□□ -1.61
PRKDC-202ENST00000338368 IGFBPL1Q8WX77 278 aa4.99□□□□□ -1.61
PRKDC-202ENST00000338368 KLF2Q9Y5W3 355 aaPredicted RBP4.99□□□□□ -1.61
PRKDC-202ENST00000338368 ANKRD17O75179 2603 aaKnown RBP4.99□□□□□ -1.61
PRKDC-202ENST00000338368 FAM223BA6NKX1 122 aa4.99□□□□□ -1.61
PRKDC-202ENST00000338368 FAM231DQ6ZW35 169 aa4.99□□□□□ -1.61
PRKDC-202ENST00000338368 FAM223AQ8IWN6 122 aa4.99□□□□□ -1.61
PRKDC-202ENST00000338368 LINC00574Q9H8X3 128 aa4.99□□□□□ -1.61
PRKDC-202ENST00000338368 TEX48A0A1B0GUV7 120 aa4.99□□□□□ -1.61
PRKDC-202ENST00000338368 RNF223E7ERA6 249 aa4.99□□□□□ -1.61
PRKDC-202ENST00000338368 C3orf79P0CE67 100 aa4.99□□□□□ -1.61
PRKDC-202ENST00000338368 CTAG1AP78358 180 aa4.99□□□□□ -1.61
PRKDC-202ENST00000338368 EIF4EBP1Q13541 118 aaPredicted RBP4.99□□□□□ -1.61
PRKDC-202ENST00000338368 LINC00477Q96M19 166 aa4.99□□□□□ -1.61
PRKDC-202ENST00000338368 NDUFAF3Q9BU61 184 aa4.99□□□□□ -1.61
PRKDC-202ENST00000338368 TMEM14CQ9P0S9 112 aa4.99□□□□□ -1.61
PRKDC-202ENST00000338368 ZNF492Q9P255 531 aa4.99□□□□□ -1.61
PRKDC-202ENST00000338368 PEF1Q9UBV8 284 aaKnown RBP4.99□□□□□ -1.61
PRKDC-202ENST00000338368 MORN5Q5VZ52 161 aa4.99□□□□□ -1.61
PRKDC-202ENST00000338368 HBDP02042 147 aa4.98□□□□□ -1.61
PRKDC-202ENST00000338368 SRD5A1P18405 259 aa4.98□□□□□ -1.61
PRKDC-202ENST00000338368 H3BRN7 92 aa4.98□□□□□ -1.61
PRKDC-202ENST00000338368 CHCHD1Q96BP2 118 aaKnown RBP4.98□□□□□ -1.61
PRKDC-202ENST00000338368 C17orf77Q96MU5 243 aa4.98□□□□□ -1.61
PRKDC-202ENST00000338368 YAE1D1Q9NRH1 226 aa4.98□□□□□ -1.61
PRKDC-202ENST00000338368 IGHV4-61A0A0C4DH41 118 aa4.98□□□□□ -1.61
PRKDC-202ENST00000338368 C7orf71A4D174 169 aa4.98□□□□□ -1.61
PRKDC-202ENST00000338368 DUSP14O95147 198 aaKnown RBP4.98□□□□□ -1.61
PRKDC-202ENST00000338368 Q0VG73 95 aa4.98□□□□□ -1.61
PRKDC-202ENST00000338368 ZNF56Q15929 161 aa4.98□□□□□ -1.61
PRKDC-202ENST00000338368 MRPL36Q9P0J6 103 aaKnown RBP4.98□□□□□ -1.61
PRKDC-202ENST00000338368 TTC9CQ8N5M4 171 aa4.98□□□□□ -1.61
PRKDC-202ENST00000338368 ZNF414Q96IQ9 312 aa4.98□□□□□ -1.61
PRKDC-202ENST00000338368 PRR25Q96S07 402 aa4.98□□□□□ -1.61
PRKDC-202ENST00000338368 ERCC8Q13216 396 aa4.98□□□□□ -1.61
PRKDC-202ENST00000338368 ZNF502Q8TBZ5 544 aa4.98□□□□□ -1.61
PRKDC-202ENST00000338368 USMG5Q96IX5 58 aa4.98□□□□□ -1.61
PRKDC-202ENST00000338368 C2orf88Q9BSF0 95 aa4.98□□□□□ -1.61
PRKDC-202ENST00000338368 ADAMTS20P59510 1910 aa4.98□□□□□ -1.61
PRKDC-202ENST00000338368 CENPVL3A0A0U1RRI6 287 aa4.98□□□□□ -1.61
PRKDC-202ENST00000338368 FAM181BA6NEQ2 426 aa4.98□□□□□ -1.61
PRKDC-202ENST00000338368 TEX22C9J3V5 150 aa4.98□□□□□ -1.61
PRKDC-202ENST00000338368 RNASE4P34096 147 aaKnown RBP4.98□□□□□ -1.61
PRKDC-202ENST00000338368 ITLN2Q8WWU7 325 aaPredicted RBP4.98□□□□□ -1.61
PRKDC-202ENST00000338368 I3L2K1 104 aa4.98□□□□□ -1.61
PRKDC-202ENST00000338368 K7EN84 100 aa4.98□□□□□ -1.61
PRKDC-202ENST00000338368 SRSF9Q13242 221 aaKnown RBP eCLIP4.98□□□□□ -1.61
PRKDC-202ENST00000338368 GFRA4Q9GZZ7 299 aa4.98□□□□□ -1.61
PRKDC-202ENST00000338368 PPBPP02775 128 aa4.98□□□□□ -1.61
PRKDC-202ENST00000338368 KIR2DL4Q99706 377 aa4.98□□□□□ -1.61
PRKDC-202ENST00000338368 A0A1B0GV90 55 aa4.98□□□□□ -1.61
PRKDC-202ENST00000338368 FAM231BA6NCW3 169 aa4.98□□□□□ -1.61
PRKDC-202ENST00000338368 ARMS2P0C7Q2 107 aa4.98□□□□□ -1.61
PRKDC-202ENST00000338368 LDLRAD2Q5SZI1 272 aa4.98□□□□□ -1.61
PRKDC-202ENST00000338368 MRPL27Q9P0M9 148 aaKnown RBP4.97□□□□□ -1.61
PRKDC-202ENST00000338368 HOXB4P17483 251 aaPredicted RBP4.97□□□□□ -1.61
PRKDC-202ENST00000338368 AMMECR1LQ6DCA0 310 aa4.97□□□□□ -1.61
PRKDC-202ENST00000338368 A0A1W2PRX2 142 aa4.97□□□□□ -1.61
PRKDC-202ENST00000338368 PLP1P60201 277 aa4.97□□□□□ -1.61
PRKDC-202ENST00000338368 D6R8Y8 96 aa4.97□□□□□ -1.61
PRKDC-202ENST00000338368 NCR2O95944 276 aa4.97□□□□□ -1.61
PRKDC-202ENST00000338368 EDA2RQ9HAV5 297 aa4.97□□□□□ -1.61
PRKDC-202ENST00000338368 PRSS46E5RG02 174 aa4.97□□□□□ -1.61
PRKDC-202ENST00000338368 CD7P09564 240 aa4.97□□□□□ -1.61
PRKDC-202ENST00000338368 DAZ1Q9NQZ3 744 aaKnown RBP4.97□□□□□ -1.61
PRKDC-202ENST00000338368 GAGE1Q13065 139 aa4.97□□□□□ -1.61
PRKDC-202ENST00000338368 ASPHD1Q5U4P2 390 aa4.97□□□□□ -1.61
PRKDC-202ENST00000338368 TMEM75Q8N9X5 138 aa4.97□□□□□ -1.61
PRKDC-202ENST00000338368 ALKBH7Q9BT30 221 aaPredicted RBP4.97□□□□□ -1.61
PRKDC-202ENST00000338368 NXT2Q9NPJ8 142 aaKnown RBP4.97□□□□□ -1.61
PRKDC-202ENST00000338368 IGKV1-17P01599 117 aa4.97□□□□□ -1.61
PRKDC-202ENST00000338368 DPH3P1Q9H4G8 78 aa4.97□□□□□ -1.61
PRKDC-202ENST00000338368 SNAI2O43623 268 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms