RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 HLA-DMBP28068 263 aa8.79□□□□□ -1
SPTLC1-202ENST00000337841 GCHFRP30047 84 aa8.79□□□□□ -1
SPTLC1-202ENST00000337841 NUTF2P61970 127 aaKnown RBP8.79□□□□□ -1
SPTLC1-202ENST00000337841 FAM74A1Q5RGS3 127 aa8.79□□□□□ -1
SPTLC1-202ENST00000337841 MORN3Q6PF18 240 aaPredicted RBP8.79□□□□□ -1
SPTLC1-202ENST00000337841 SBSPONQ8IVN8 264 aa8.79□□□□□ -1
SPTLC1-202ENST00000337841 OR4B1Q8NGF8 309 aa8.79□□□□□ -1
SPTLC1-202ENST00000337841 FAM213BQ8TBF2 198 aa8.79□□□□□ -1
SPTLC1-202ENST00000337841 HLA-DRB4X5D2U9 266 aa8.79□□□□□ -1
SPTLC1-202ENST00000337841 A0A0J9YX75 114 aa8.78□□□□□ -1
SPTLC1-202ENST00000337841 CSN1S1P47710 185 aa8.78□□□□□ -1
SPTLC1-202ENST00000337841 ICAM4Q14773 271 aa8.78□□□□□ -1
SPTLC1-202ENST00000337841 ZNF726P1Q15940 193 aa8.78□□□□□ -1
SPTLC1-202ENST00000337841 TRPT1Q86TN4 253 aaKnown RBP8.78□□□□□ -1
SPTLC1-202ENST00000337841 IQCF2Q8IXL9 164 aa8.78□□□□□ -1
SPTLC1-202ENST00000337841 LINC00528Q8N1L1 170 aa8.78□□□□□ -1
SPTLC1-202ENST00000337841 OR8A1Q8NGG7 326 aa8.78□□□□□ -1
SPTLC1-202ENST00000337841 OR10J6PQ8NGY7 276 aa8.78□□□□□ -1
SPTLC1-202ENST00000337841 RXFP4Q8TDU9 374 aa8.78□□□□□ -1
SPTLC1-202ENST00000337841 MRPL53Q96EL3 112 aaKnown RBP8.78□□□□□ -1
SPTLC1-202ENST00000337841 CLUHP3Q96NS8 147 aa8.78□□□□□ -1
SPTLC1-202ENST00000337841 ZMAT4Q9H898 229 aa8.78□□□□□ -1
SPTLC1-202ENST00000337841 PPP1R14DQ9NXH3 145 aa8.78□□□□□ -1
SPTLC1-202ENST00000337841 MAP1LC3B2A6NCE7 125 aa8.77□□□□□ -1.01
SPTLC1-202ENST00000337841 PGPA6NDG6 321 aa8.77□□□□□ -1.01
SPTLC1-202ENST00000337841 ZNF705FA8MVS1 300 aaPredicted RBP8.77□□□□□ -1.01
SPTLC1-202ENST00000337841 F6UB75 175 aa8.77□□□□□ -1.01
SPTLC1-202ENST00000337841 TEX46H3BTG2 121 aa8.77□□□□□ -1.01
SPTLC1-202ENST00000337841 IGKV3-20P01619 116 aa8.77□□□□□ -1.01
SPTLC1-202ENST00000337841 H2AFB1P0C5Y9 115 aa8.77□□□□□ -1.01
SPTLC1-202ENST00000337841 DEFB1P60022 68 aa8.77□□□□□ -1.01
SPTLC1-202ENST00000337841 GDF5OSQ5U4N7 250 aa8.77□□□□□ -1.01
SPTLC1-202ENST00000337841 EXOC3-AS1Q8N2X6 119 aa8.77□□□□□ -1.01
SPTLC1-202ENST00000337841 SFT2D1Q8WV19 159 aa8.77□□□□□ -1.01
SPTLC1-202ENST00000337841 MBD3L1Q8WWY6 194 aa8.77□□□□□ -1.01
SPTLC1-202ENST00000337841 PHYHIPLQ96FC7 376 aa8.77□□□□□ -1.01
SPTLC1-202ENST00000337841 MAP1LC3BQ9GZQ8 125 aa8.77□□□□□ -1.01
SPTLC1-202ENST00000337841 Q9H3A6 140 aa8.77□□□□□ -1.01
SPTLC1-202ENST00000337841 OTORQ9NRC9 128 aa8.77□□□□□ -1.01
SPTLC1-202ENST00000337841 MEGF8Q7Z7M0 2845 aa8.76□□□□□ -1.01
SPTLC1-202ENST00000337841 FHITP49789 147 aa8.76□□□□□ -1.01
SPTLC1-202ENST00000337841 SULT1A2P50226 295 aa8.76□□□□□ -1.01
SPTLC1-202ENST00000337841 CNN1P51911 297 aaKnown RBP8.76□□□□□ -1.01
SPTLC1-202ENST00000337841 HIST1H1AQ02539 215 aaPredicted RBP8.76□□□□□ -1.01
SPTLC1-202ENST00000337841 Q6ZWC4 215 aa8.76□□□□□ -1.01
SPTLC1-202ENST00000337841 SSX7Q7RTT5 188 aa8.76□□□□□ -1.01
SPTLC1-202ENST00000337841 ARL6IP6Q8N6S5 226 aa8.76□□□□□ -1.01
SPTLC1-202ENST00000337841 CMTM2Q8TAZ6 248 aa8.76□□□□□ -1.01
SPTLC1-202ENST00000337841 SUN5Q8TC36 379 aa8.76□□□□□ -1.01
SPTLC1-202ENST00000337841 SPATA25Q9BR10 227 aa8.76□□□□□ -1.01
SPTLC1-202ENST00000337841 C1QTNF4Q9BXJ3 329 aa8.76□□□□□ -1.01
SPTLC1-202ENST00000337841 M0R3E3 92 aa8.75□□□□□ -1.01
SPTLC1-202ENST00000337841 CA1P00915 261 aaPredicted RBP8.75□□□□□ -1.01
SPTLC1-202ENST00000337841 ZNF705DP0CH99 300 aaPredicted RBP8.75□□□□□ -1.01
SPTLC1-202ENST00000337841 ZNF705BP0CI00 300 aaPredicted RBP8.75□□□□□ -1.01
SPTLC1-202ENST00000337841 FGF8P55075 233 aaPredicted RBP8.75□□□□□ -1.01
SPTLC1-202ENST00000337841 NKX6-2Q9C056 277 aaPredicted RBP8.75□□□□□ -1.01
SPTLC1-202ENST00000337841 A0A1W2PRE2 83 aa8.74□□□□□ -1.01
SPTLC1-202ENST00000337841 PRAC2D3DTV9 90 aa8.74□□□□□ -1.01
SPTLC1-202ENST00000337841 AMBPP02760 352 aa8.74□□□□□ -1.01
SPTLC1-202ENST00000337841 PPT1P50897 306 aa8.74□□□□□ -1.01
SPTLC1-202ENST00000337841 SUMO1P63165 101 aaKnown RBP8.74□□□□□ -1.01
SPTLC1-202ENST00000337841 LINC00477Q96M19 166 aa8.74□□□□□ -1.01
SPTLC1-202ENST00000337841 TM2D3Q9BRN9 247 aa8.74□□□□□ -1.01
SPTLC1-202ENST00000337841 TMPRSS5Q9H3S3 457 aa8.74□□□□□ -1.01
SPTLC1-202ENST00000337841 TP53TG1Q9Y2A0 90 aa8.74□□□□□ -1.01
SPTLC1-202ENST00000337841 TRAV1-1A0A0B4J248 108 aa8.73□□□□□ -1.01
SPTLC1-202ENST00000337841 A8MTW9 85 aa8.73□□□□□ -1.01
SPTLC1-202ENST00000337841 BOLA2-SMG1P6H3BVE0 249 aa8.73□□□□□ -1.01
SPTLC1-202ENST00000337841 SPRY2O43597 315 aa8.73□□□□□ -1.01
SPTLC1-202ENST00000337841 HBE1P02100 147 aa8.73□□□□□ -1.01
SPTLC1-202ENST00000337841 SLC25A5P05141 298 aaKnown RBP8.73□□□□□ -1.01
SPTLC1-202ENST00000337841 TSPOP30536 169 aa8.73□□□□□ -1.01
SPTLC1-202ENST00000337841 BLOC1S1P78537 153 aa8.73□□□□□ -1.01
SPTLC1-202ENST00000337841 RCHY1Q96PM5 261 aa8.73□□□□□ -1.01
SPTLC1-202ENST00000337841 ZNF705EA8MWA4 302 aaPredicted RBP8.72□□□□□ -1.01
SPTLC1-202ENST00000337841 DIRC3C9JPN6 131 aa8.72□□□□□ -1.01
SPTLC1-202ENST00000337841 NPIPB6E9PJ23 425 aa8.72□□□□□ -1.01
SPTLC1-202ENST00000337841 K7EQM0 130 aa8.72□□□□□ -1.01
SPTLC1-202ENST00000337841 IFNA7P01567 189 aa8.72□□□□□ -1.01
SPTLC1-202ENST00000337841 PRB4P10163 310 aaPredicted RBP8.72□□□□□ -1.01
SPTLC1-202ENST00000337841 FXYD7P58549 80 aa8.72□□□□□ -1.01
SPTLC1-202ENST00000337841 UBE2G2P60604 165 aa8.72□□□□□ -1.01
SPTLC1-202ENST00000337841 TMEM78Q5T7P6 136 aa8.72□□□□□ -1.01
SPTLC1-202ENST00000337841 ALKAL2Q6UX46 152 aa8.72□□□□□ -1.01
SPTLC1-202ENST00000337841 C9orf47Q6ZRZ4 202 aa8.72□□□□□ -1.01
SPTLC1-202ENST00000337841 C5orf17Q8NAS9 161 aa8.72□□□□□ -1.01
SPTLC1-202ENST00000337841 RNF183Q96D59 192 aa8.72□□□□□ -1.01
SPTLC1-202ENST00000337841 AGPAT4-IT1Q9H0P7 198 aa8.72□□□□□ -1.01
SPTLC1-202ENST00000337841 XCL2Q9UBD3 114 aa8.72□□□□□ -1.01
SPTLC1-202ENST00000337841 DNAH3Q8TD57 4116 aa8.72□□□□□ -1.01
SPTLC1-202ENST00000337841 A0A1B0GV50 99 aa8.71□□□□□ -1.02
SPTLC1-202ENST00000337841 SERTM2A0A1B0GWG4 89 aa8.71□□□□□ -1.02
SPTLC1-202ENST00000337841 RBAKDNA6NC62 111 aa8.71□□□□□ -1.02
SPTLC1-202ENST00000337841 GIG44P09565 113 aaPredicted RBP8.71□□□□□ -1.02
SPTLC1-202ENST00000337841 LEPP41159 167 aa8.71□□□□□ -1.02
SPTLC1-202ENST00000337841 ERCC8Q13216 396 aa8.71□□□□□ -1.02
SPTLC1-202ENST00000337841 DEFB135Q30KP9 77 aa8.71□□□□□ -1.02
SPTLC1-202ENST00000337841 CST9LP1Q5W188 147 aa8.71□□□□□ -1.02
SPTLC1-202ENST00000337841 AMTNQ6UX39 209 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms