RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 PRSS29PA6NIE9 313 aa6.63□□□□□ -1.35
SKA2-201ENST00000330137 NPYP01303 97 aa6.63□□□□□ -1.35
SKA2-201ENST00000330137 ARL3P36405 182 aa6.63□□□□□ -1.35
SKA2-201ENST00000330137 LEPP41159 167 aa6.63□□□□□ -1.35
SKA2-201ENST00000330137 GAGE2BQ13066 116 aa6.63□□□□□ -1.35
SKA2-201ENST00000330137 FHL3Q13643 280 aa6.63□□□□□ -1.35
SKA2-201ENST00000330137 GAGE2EQ4V326 116 aa6.63□□□□□ -1.35
SKA2-201ENST00000330137 SCNM1Q9BWG6 230 aa6.63□□□□□ -1.35
SKA2-201ENST00000330137 AKIRIN1Q9H9L7 192 aaPredicted RBP6.63□□□□□ -1.35
SKA2-201ENST00000330137 GAGE2DQ9UEU5 116 aa6.63□□□□□ -1.35
SKA2-201ENST00000330137 DNAH14Q0VDD8 3507 aa6.62□□□□□ -1.35
SKA2-201ENST00000330137 TIMM8AO60220 97 aaPredicted RBP6.62□□□□□ -1.35
SKA2-201ENST00000330137 RBP4P02753 201 aa6.62□□□□□ -1.35
SKA2-201ENST00000330137 CLEC3BP05452 202 aa6.62□□□□□ -1.35
SKA2-201ENST00000330137 WT1-ASQ06250 92 aa6.62□□□□□ -1.35
SKA2-201ENST00000330137 PLA2G2CQ5R387 149 aa6.62□□□□□ -1.35
SKA2-201ENST00000330137 GTSCR1Q86UQ5 136 aa6.62□□□□□ -1.35
SKA2-201ENST00000330137 C8orf31Q8N9H6 132 aa6.62□□□□□ -1.35
SKA2-201ENST00000330137 C1orf162Q8NEQ5 155 aaPredicted RBP6.62□□□□□ -1.35
SKA2-201ENST00000330137 MYOZ3Q8TDC0 251 aa6.62□□□□□ -1.35
SKA2-201ENST00000330137 CARD19Q96LW7 228 aa6.62□□□□□ -1.35
SKA2-201ENST00000330137 RPUSD1Q9UJJ7 312 aaKnown RBP6.62□□□□□ -1.35
SKA2-201ENST00000330137 DMXL1Q9Y485 3027 aa6.62□□□□□ -1.35
SKA2-201ENST00000330137 TRBV19A0A075B6N1 114 aa6.62□□□□□ -1.35
SKA2-201ENST00000330137 PINLYPA6NC86 204 aa6.62□□□□□ -1.35
SKA2-201ENST00000330137 IGKV3-15P01624 115 aa6.62□□□□□ -1.35
SKA2-201ENST00000330137 IGKV1-16P04430 117 aa6.62□□□□□ -1.35
SKA2-201ENST00000330137 IFITM1P13164 125 aa6.62□□□□□ -1.35
SKA2-201ENST00000330137 CRIP1P50238 77 aa6.62□□□□□ -1.35
SKA2-201ENST00000330137 LY6DQ14210 128 aa6.62□□□□□ -1.35
SKA2-201ENST00000330137 C3AR1Q16581 482 aa6.62□□□□□ -1.35
SKA2-201ENST00000330137 CXorf67Q86X51 503 aaPredicted RBP6.62□□□□□ -1.35
SKA2-201ENST00000330137 FLYWCH2Q96CP2 140 aaKnown RBP6.62□□□□□ -1.35
SKA2-201ENST00000330137 PI4KAP42356 2102 aa6.61□□□□□ -1.35
SKA2-201ENST00000330137 ZNF292O60281 2723 aa6.61□□□□□ -1.35
SKA2-201ENST00000330137 K7EMI3 77 aa6.61□□□□□ -1.35
SKA2-201ENST00000330137 LHBP01229 141 aa6.61□□□□□ -1.35
SKA2-201ENST00000330137 IGLC6P0CF74 106 aa6.61□□□□□ -1.35
SKA2-201ENST00000330137 PRR31Q5SQ13 230 aa6.61□□□□□ -1.35
SKA2-201ENST00000330137 FOXC2Q99958 501 aa6.61□□□□□ -1.35
SKA2-201ENST00000330137 GVINP1Q7Z2Y8 2422 aa6.61□□□□□ -1.35
SKA2-201ENST00000330137 FCN3O75636 299 aa6.61□□□□□ -1.35
SKA2-201ENST00000330137 SNCGO76070 127 aa6.61□□□□□ -1.35
SKA2-201ENST00000330137 MAPKAPK5-AS1Q8N8E1 139 aa6.61□□□□□ -1.35
SKA2-201ENST00000330137 FBXL15Q9H469 300 aa6.61□□□□□ -1.35
SKA2-201ENST00000330137 TRAV8-1A0A0A6YYK1 113 aa6.6□□□□□ -1.35
SKA2-201ENST00000330137 CGB1A6NKQ9 187 aa6.6□□□□□ -1.35
SKA2-201ENST00000330137 H7C1H1 209 aa6.6□□□□□ -1.35
SKA2-201ENST00000330137 CD40P25942 277 aa6.6□□□□□ -1.35
SKA2-201ENST00000330137 TTC32Q5I0X7 151 aa6.6□□□□□ -1.35
SKA2-201ENST00000330137 FAM169BQ8N8A8 192 aa6.6□□□□□ -1.35
SKA2-201ENST00000330137 NGBQ9NPG2 151 aa6.6□□□□□ -1.35
SKA2-201ENST00000330137 TMEM213A2RRL7 107 aa6.6□□□□□ -1.35
SKA2-201ENST00000330137 PLAUP00749 431 aa6.6□□□□□ -1.35
SKA2-201ENST00000330137 SCGB1C2P0DMR2 95 aa6.6□□□□□ -1.35
SKA2-201ENST00000330137 GUSBP11Q6P575 273 aa6.6□□□□□ -1.35
SKA2-201ENST00000330137 SIGLEC15Q6ZMC9 328 aa6.6□□□□□ -1.35
SKA2-201ENST00000330137 RNF185Q96GF1 192 aa6.6□□□□□ -1.35
SKA2-201ENST00000330137 DKK4Q9UBT3 224 aa6.6□□□□□ -1.35
SKA2-201ENST00000330137 IGLV2-18A0A075B6J9 118 aa6.59□□□□□ -1.35
SKA2-201ENST00000330137 TRAV40A0A0B4J280 105 aa6.59□□□□□ -1.35
SKA2-201ENST00000330137 LY6G6EA0A0G2JKS1 128 aa6.59□□□□□ -1.35
SKA2-201ENST00000330137 F8VRH5 84 aa6.59□□□□□ -1.35
SKA2-201ENST00000330137 TNFRSF6BO95407 300 aa6.59□□□□□ -1.35
SKA2-201ENST00000330137 SLC25A16P16260 332 aa6.59□□□□□ -1.35
SKA2-201ENST00000330137 Q0VFX4 171 aa6.59□□□□□ -1.35
SKA2-201ENST00000330137 VMA21Q3ZAQ7 101 aa6.59□□□□□ -1.35
SKA2-201ENST00000330137 OR10J6PQ8NGY7 276 aa6.59□□□□□ -1.35
SKA2-201ENST00000330137 U3KQA8 63 aa6.59□□□□□ -1.35
SKA2-201ENST00000330137 GATA4P43694 442 aa6.59□□□□□ -1.35
SKA2-201ENST00000330137 LINC00311Q8N616 119 aa6.59□□□□□ -1.35
SKA2-201ENST00000330137 SRSF8Q9BRL6 282 aaKnown RBP6.59□□□□□ -1.35
SKA2-201ENST00000330137 SHANK2-AS3Q9BTD1 123 aa6.59□□□□□ -1.35
SKA2-201ENST00000330137 TTTY12Q9BZ98 90 aa6.59□□□□□ -1.35
SKA2-201ENST00000330137 TMEM160Q9NX00 188 aa6.59□□□□□ -1.35
SKA2-201ENST00000330137 MRPL36Q9P0J6 103 aaKnown RBP6.59□□□□□ -1.35
SKA2-201ENST00000330137 CDX4O14627 284 aaPredicted RBP6.58□□□□□ -1.36
SKA2-201ENST00000330137 TFF1P04155 84 aa6.58□□□□□ -1.36
SKA2-201ENST00000330137 PSMB2P49721 201 aa6.58□□□□□ -1.36
SKA2-201ENST00000330137 PPP1R27Q86WC6 154 aa6.58□□□□□ -1.36
SKA2-201ENST00000330137 DEFB124Q8NES8 71 aa6.58□□□□□ -1.36
SKA2-201ENST00000330137 GLMPQ8WWB7 406 aa6.58□□□□□ -1.36
SKA2-201ENST00000330137 TTTY13Q9BZ97 58 aa6.58□□□□□ -1.36
SKA2-201ENST00000330137 MRPL35Q9NZE8 188 aaKnown RBP6.58□□□□□ -1.36
SKA2-201ENST00000330137 MDFICQ9P1T7 246 aa6.58□□□□□ -1.36
SKA2-201ENST00000330137 CABIN1Q9Y6J0 2220 aa6.58□□□□□ -1.36
SKA2-201ENST00000330137 LINC01549A6NIU2 74 aa6.58□□□□□ -1.36
SKA2-201ENST00000330137 H3BRN7 92 aa6.58□□□□□ -1.36
SKA2-201ENST00000330137 SH2D1AO60880 128 aa6.58□□□□□ -1.36
SKA2-201ENST00000330137 LAGE3Q14657 143 aa6.58□□□□□ -1.36
SKA2-201ENST00000330137 EXOC3-AS1Q8N2X6 119 aa6.58□□□□□ -1.36
SKA2-201ENST00000330137 SMIM20Q8N5G0 67 aa6.58□□□□□ -1.36
SKA2-201ENST00000330137 PROCRQ9UNN8 238 aa6.58□□□□□ -1.36
SKA2-201ENST00000330137 SPTBN4Q9H254 2564 aa6.58□□□□□ -1.36
SKA2-201ENST00000330137 IGHV3-64DA0A0J9YX35 117 aa6.57□□□□□ -1.36
SKA2-201ENST00000330137 A0A1W2PPI3 338 aa6.57□□□□□ -1.36
SKA2-201ENST00000330137 J3KRW8 73 aa6.57□□□□□ -1.36
SKA2-201ENST00000330137 IGLV1-44P01699 117 aa6.57□□□□□ -1.36
SKA2-201ENST00000330137 IGLV2-23P01705 113 aa6.57□□□□□ -1.36
SKA2-201ENST00000330137 WT1P19544 449 aaPredicted RBP6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms