RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 TMEM75Q8N9X5 138 aa11.02□□□□□ -0.65
ATP2C1-201ENST00000328560 TMEM189A5PLL7 270 aa11.01□□□□□ -0.65
ATP2C1-201ENST00000328560 FAM231BA6NCW3 169 aa11.01□□□□□ -0.65
ATP2C1-201ENST00000328560 SCGB2A1O75556 95 aa11.01□□□□□ -0.65
ATP2C1-201ENST00000328560 AP5S1Q9NUS5 200 aa11.01□□□□□ -0.65
ATP2C1-201ENST00000328560 IGHV3-66A0A0C4DH42 116 aa11.01□□□□□ -0.65
ATP2C1-201ENST00000328560 ECSCRQ19T08 205 aa11.01□□□□□ -0.65
ATP2C1-201ENST00000328560 LYZL1Q6UWQ5 148 aa11.01□□□□□ -0.65
ATP2C1-201ENST00000328560 TMEM191AQ9H0A3 160 aa11.01□□□□□ -0.65
ATP2C1-201ENST00000328560 THYN1Q9P016 225 aa11.01□□□□□ -0.65
ATP2C1-201ENST00000328560 OR5AL1P0C617 328 aa11.01□□□□□ -0.65
ATP2C1-201ENST00000328560 ZNF562Q6V9R5 426 aa11.01□□□□□ -0.65
ATP2C1-201ENST00000328560 SRSF8Q9BRL6 282 aaKnown RBP11.01□□□□□ -0.65
ATP2C1-201ENST00000328560 M0R1W7 72 aa11□□□□□ -0.65
ATP2C1-201ENST00000328560 SNAI2O43623 268 aa11□□□□□ -0.65
ATP2C1-201ENST00000328560 C1RLQ9NZP8 487 aa11□□□□□ -0.65
ATP2C1-201ENST00000328560 IGLV11-55A0A075B6I3 123 aa11□□□□□ -0.65
ATP2C1-201ENST00000328560 TRAV30A0A087WSZ9 112 aa11□□□□□ -0.65
ATP2C1-201ENST00000328560 WI2-2373I1.2A0A1W2PRP0 233 aa11□□□□□ -0.65
ATP2C1-201ENST00000328560 NPIPB5A8MRT5 1133 aa11□□□□□ -0.65
ATP2C1-201ENST00000328560 NDUFA3O95167 84 aa11□□□□□ -0.65
ATP2C1-201ENST00000328560 AMN1Q8IY45 258 aa11□□□□□ -0.65
ATP2C1-201ENST00000328560 NPBQ8NG41 125 aa11□□□□□ -0.65
ATP2C1-201ENST00000328560 OR8A1Q8NGG7 326 aa11□□□□□ -0.65
ATP2C1-201ENST00000328560 IGHV3-49A0A0A0MS15 119 aa10.99□□□□□ -0.65
ATP2C1-201ENST00000328560 SH2D1AO60880 128 aa10.99□□□□□ -0.65
ATP2C1-201ENST00000328560 FAM106CPP0CH98 169 aa10.99□□□□□ -0.65
ATP2C1-201ENST00000328560 ZFP36P26651 326 aaKnown RBP10.99□□□□□ -0.65
ATP2C1-201ENST00000328560 FAM106AQ4KMX7 169 aa10.99□□□□□ -0.65
ATP2C1-201ENST00000328560 MRPS12O15235 138 aaKnown RBP10.99□□□□□ -0.65
ATP2C1-201ENST00000328560 HOXB4P17483 251 aaPredicted RBP10.99□□□□□ -0.65
ATP2C1-201ENST00000328560 GPR183P32249 361 aa10.99□□□□□ -0.65
ATP2C1-201ENST00000328560 IFI27P40305 119 aaPredicted RBP10.99□□□□□ -0.65
ATP2C1-201ENST00000328560 LYPD1Q8N2G4 141 aa10.99□□□□□ -0.65
ATP2C1-201ENST00000328560 MRPS16Q9Y3D3 137 aaKnown RBP10.99□□□□□ -0.65
ATP2C1-201ENST00000328560 D6R8Y8 96 aa10.99□□□□□ -0.65
ATP2C1-201ENST00000328560 MPV17L2Q567V2 206 aa10.99□□□□□ -0.65
ATP2C1-201ENST00000328560 HSPB8Q9UJY1 196 aa10.99□□□□□ -0.65
ATP2C1-201ENST00000328560 PTTG1IPP53801 180 aa10.98□□□□□ -0.65
ATP2C1-201ENST00000328560 HIVEP3Q5T1R4 2406 aa10.98□□□□□ -0.65
ATP2C1-201ENST00000328560 F8W735 103 aaPredicted RBP10.98□□□□□ -0.65
ATP2C1-201ENST00000328560 SMKR1H3BMG3 65 aa10.98□□□□□ -0.65
ATP2C1-201ENST00000328560 NUDT3O95989 172 aa10.98□□□□□ -0.65
ATP2C1-201ENST00000328560 RPL7P18124 248 aaKnown RBP10.98□□□□□ -0.65
ATP2C1-201ENST00000328560 VGLL1Q99990 258 aa10.98□□□□□ -0.65
ATP2C1-201ENST00000328560 ORM1P02763 201 aa10.97□□□□□ -0.65
ATP2C1-201ENST00000328560 RABAC1Q9UI14 185 aa10.97□□□□□ -0.65
ATP2C1-201ENST00000328560 ODF3BA8MYP8 253 aa10.97□□□□□ -0.65
ATP2C1-201ENST00000328560 LOXL1Q08397 574 aaPredicted RBP10.97□□□□□ -0.65
ATP2C1-201ENST00000328560 GAGE1Q13065 139 aa10.97□□□□□ -0.65
ATP2C1-201ENST00000328560 TWIST1Q15672 202 aa10.97□□□□□ -0.65
ATP2C1-201ENST00000328560 HRNRQ86YZ3 2850 aaPredicted RBP10.97□□□□□ -0.65
ATP2C1-201ENST00000328560 ZNF207O43670 478 aaKnown RBP10.97□□□□□ -0.65
ATP2C1-201ENST00000328560 SLC25A34Q6PIV7 304 aa10.97□□□□□ -0.65
ATP2C1-201ENST00000328560 SPG11Q96JI7 2443 aa10.97□□□□□ -0.65
ATP2C1-201ENST00000328560 NCR2O95944 276 aa10.96□□□□□ -0.65
ATP2C1-201ENST00000328560 CTSGP08311 255 aa10.96□□□□□ -0.65
ATP2C1-201ENST00000328560 PPIFP30405 207 aaKnown RBP10.96□□□□□ -0.65
ATP2C1-201ENST00000328560 WFDC3Q8IUB2 231 aa10.96□□□□□ -0.65
ATP2C1-201ENST00000328560 PRELID3AQ96N28 172 aa10.96□□□□□ -0.66
ATP2C1-201ENST00000328560 EGR2P11161 476 aaPredicted RBP10.96□□□□□ -0.66
ATP2C1-201ENST00000328560 PSG9Q00887 426 aa10.96□□□□□ -0.66
ATP2C1-201ENST00000328560 ERCC8Q13216 396 aa10.96□□□□□ -0.66
ATP2C1-201ENST00000328560 C15orf32Q32M92 178 aa10.96□□□□□ -0.66
ATP2C1-201ENST00000328560 OR10AG1Q8NH19 301 aa10.96□□□□□ -0.66
ATP2C1-201ENST00000328560 ST20Q9HBF5 79 aa10.96□□□□□ -0.66
ATP2C1-201ENST00000328560 IGHV7-81A0A0B4J1V7 117 aa10.95□□□□□ -0.66
ATP2C1-201ENST00000328560 OVOL3O00110 214 aa10.95□□□□□ -0.66
ATP2C1-201ENST00000328560 TTC9CQ8N5M4 171 aa10.95□□□□□ -0.66
ATP2C1-201ENST00000328560 PRR25Q96S07 402 aa10.95□□□□□ -0.66
ATP2C1-201ENST00000328560 CLEC3BP05452 202 aa10.95□□□□□ -0.66
ATP2C1-201ENST00000328560 ZNF80P51504 273 aaPredicted RBP10.95□□□□□ -0.66
ATP2C1-201ENST00000328560 PDE6HQ13956 83 aa10.95□□□□□ -0.66
ATP2C1-201ENST00000328560 PET117Q6UWS5 81 aa10.95□□□□□ -0.66
ATP2C1-201ENST00000328560 RNF182Q8N6D2 247 aa10.95□□□□□ -0.66
ATP2C1-201ENST00000328560 IGHV3OR16-10A0A075B7F0 116 aa10.94□□□□□ -0.66
ATP2C1-201ENST00000328560 TRBV6-1A0A0K0K1D8 114 aa10.94□□□□□ -0.66
ATP2C1-201ENST00000328560 A0A1W2PPR1 153 aa10.94□□□□□ -0.66
ATP2C1-201ENST00000328560 ZNF738Q8NE65 137 aa10.94□□□□□ -0.66
ATP2C1-201ENST00000328560 A0A087X0K7 114 aa10.94□□□□□ -0.66
ATP2C1-201ENST00000328560 G3V318 75 aa10.94□□□□□ -0.66
ATP2C1-201ENST00000328560 CRXO43186 299 aaPredicted RBP10.94□□□□□ -0.66
ATP2C1-201ENST00000328560 CKS2P33552 79 aa10.94□□□□□ -0.66
ATP2C1-201ENST00000328560 VAMP3Q15836 100 aa10.94□□□□□ -0.66
ATP2C1-201ENST00000328560 RHOGP84095 191 aa10.94□□□□□ -0.66
ATP2C1-201ENST00000328560 SIGLEC8Q9NYZ4 499 aa10.94□□□□□ -0.66
ATP2C1-201ENST00000328560 MSRB1Q9NZV6 116 aa10.94□□□□□ -0.66
ATP2C1-201ENST00000328560 CBY3A6NI87 242 aa10.93□□□□□ -0.66
ATP2C1-201ENST00000328560 SAPCD1Q5SSQ6 148 aa10.93□□□□□ -0.66
ATP2C1-201ENST00000328560 MINOS1Q5TGZ0 78 aa10.93□□□□□ -0.66
ATP2C1-201ENST00000328560 Q6AWC8 147 aa10.93□□□□□ -0.66
ATP2C1-201ENST00000328560 C11orf71Q6IPW1 123 aa10.93□□□□□ -0.66
ATP2C1-201ENST00000328560 CLEC19AQ6UXS0 136 aa10.93□□□□□ -0.66
ATP2C1-201ENST00000328560 ZNF747Q9BV97 191 aa10.93□□□□□ -0.66
ATP2C1-201ENST00000328560 SMAD5-AS1Q9Y6J3 95 aa10.93□□□□□ -0.66
ATP2C1-201ENST00000328560 MINOS1-NBL1R4GNA1 71 aa10.93□□□□□ -0.66
ATP2C1-201ENST00000328560 ORMDL3Q8N138 153 aa10.93□□□□□ -0.66
ATP2C1-201ENST00000328560 FER1L6-AS1Q8NA97 138 aa10.93□□□□□ -0.66
ATP2C1-201ENST00000328560 LINC00527Q9UJ94 153 aa10.93□□□□□ -0.66
ATP2C1-201ENST00000328560 COX11Q9Y6N1 276 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 151.5 ms