RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 FAM231DQ6ZW35 169 aa16.9■□□□□ 0.3
RNF40-201ENST00000324685 RALGAPA1Q6GYQ0 2036 aa16.9■□□□□ 0.3
RNF40-201ENST00000324685 NDUFS6O75380 124 aaKnown RBP16.9■□□□□ 0.3
RNF40-201ENST00000324685 ZNF114Q8NC26 417 aa16.9■□□□□ 0.3
RNF40-201ENST00000324685 SVILO95425 2214 aa16.9■□□□□ 0.3
RNF40-201ENST00000324685 TMEM14CQ9P0S9 112 aa16.9■□□□□ 0.3
RNF40-201ENST00000324685 GATA4P43694 442 aa16.89■□□□□ 0.29
RNF40-201ENST00000324685 UTF1Q5T230 341 aa16.89■□□□□ 0.29
RNF40-201ENST00000324685 IGHV1OR15-1A0A075B7D0 117 aa16.89■□□□□ 0.29
RNF40-201ENST00000324685 MSMBP08118 114 aa16.89■□□□□ 0.29
RNF40-201ENST00000324685 FHL1Q13642 323 aa16.89■□□□□ 0.29
RNF40-201ENST00000324685 GREB1Q4ZG55 1949 aa16.89■□□□□ 0.29
RNF40-201ENST00000324685 HAPLN4Q86UW8 402 aa16.89■□□□□ 0.29
RNF40-201ENST00000324685 RUSC1-AS1Q66K80 236 aa16.88■□□□□ 0.29
RNF40-201ENST00000324685 SMIM27A0A1W2PRY6 76 aa16.88■□□□□ 0.29
RNF40-201ENST00000324685 MRPL51Q4U2R6 128 aaKnown RBP16.88■□□□□ 0.29
RNF40-201ENST00000324685 PPDPFLQ8WWR9 84 aa16.88■□□□□ 0.29
RNF40-201ENST00000324685 MDC1Q14676 2089 aaKnown RBP16.88■□□□□ 0.29
RNF40-201ENST00000324685 KNCNA6PVL3 124 aa16.88■□□□□ 0.29
RNF40-201ENST00000324685 HOXD3P31249 432 aaPredicted RBP16.88■□□□□ 0.29
RNF40-201ENST00000324685 SPINK13Q1W4C9 94 aa16.88■□□□□ 0.29
RNF40-201ENST00000324685 H3BRN7 92 aa16.87■□□□□ 0.29
RNF40-201ENST00000324685 AZU1P20160 251 aa16.87■□□□□ 0.29
RNF40-201ENST00000324685 LGALS9BQ3B8N2 356 aa16.87■□□□□ 0.29
RNF40-201ENST00000324685 LGALS9CQ6DKI2 356 aa16.87■□□□□ 0.29
RNF40-201ENST00000324685 DAD1P61803 113 aa16.87■□□□□ 0.29
RNF40-201ENST00000324685 NKAPP1Q8N9T2 125 aa16.87■□□□□ 0.29
RNF40-201ENST00000324685 XCL2Q9UBD3 114 aa16.87■□□□□ 0.29
RNF40-201ENST00000324685 IGHV1-69DA0A0B4J2H0 117 aa16.87■□□□□ 0.29
RNF40-201ENST00000324685 C9JQL5 133 aa16.87■□□□□ 0.29
RNF40-201ENST00000324685 IGHV1-69P01742 117 aa16.87■□□□□ 0.29
RNF40-201ENST00000324685 SLAQ13239 276 aa16.87■□□□□ 0.29
RNF40-201ENST00000324685 KLK9Q9UKQ9 250 aa16.87■□□□□ 0.29
RNF40-201ENST00000324685 SNRNP200O75643 2136 aaKnown RBP16.87■□□□□ 0.29
RNF40-201ENST00000324685 F8W1H4 67 aa16.86■□□□□ 0.29
RNF40-201ENST00000324685 NDUFA4O00483 81 aa16.86■□□□□ 0.29
RNF40-201ENST00000324685 TMEM126AQ9H061 195 aa16.86■□□□□ 0.29
RNF40-201ENST00000324685 C8orf86Q6ZUL3 223 aa16.86■□□□□ 0.29
RNF40-201ENST00000324685 V9GYV3 84 aa16.86■□□□□ 0.29
RNF40-201ENST00000324685 IGHV1-24A0A0C4DH33 117 aa16.86■□□□□ 0.29
RNF40-201ENST00000324685 LY6HO94772 140 aa16.86■□□□□ 0.29
RNF40-201ENST00000324685 CYYR1Q96J86 154 aa16.86■□□□□ 0.29
RNF40-201ENST00000324685 UBL5Q9BZL1 73 aa16.86■□□□□ 0.29
RNF40-201ENST00000324685 TMEM243Q9BU79 118 aa16.85■□□□□ 0.29
RNF40-201ENST00000324685 SDHAF1A6NFY7 115 aa16.85■□□□□ 0.29
RNF40-201ENST00000324685 BRWD3Q6RI45 1802 aa16.85■□□□□ 0.29
RNF40-201ENST00000324685 PAX9P55771 341 aa16.85■□□□□ 0.29
RNF40-201ENST00000324685 ZNRD1Q9P1U0 126 aa16.85■□□□□ 0.29
RNF40-201ENST00000324685 COX8AP10176 69 aa16.84■□□□□ 0.29
RNF40-201ENST00000324685 PRR25Q96S07 402 aa16.84■□□□□ 0.29
RNF40-201ENST00000324685 ICE1Q9Y2F5 2266 aa16.84■□□□□ 0.29
RNF40-201ENST00000324685 LINC00311Q8N616 119 aa16.84■□□□□ 0.29
RNF40-201ENST00000324685 CACNA1IQ9P0X4 2223 aa16.84■□□□□ 0.29
RNF40-201ENST00000324685 F5H768 121 aa16.84■□□□□ 0.29
RNF40-201ENST00000324685 UNQ6494/PRO21346Q6UXR6 183 aa16.84■□□□□ 0.29
RNF40-201ENST00000324685 HLA-DRB4P13762 266 aa16.83■□□□□ 0.29
RNF40-201ENST00000324685 TAL2Q16559 108 aa16.83■□□□□ 0.29
RNF40-201ENST00000324685 HLA-DRB4X5D2U9 266 aa16.83■□□□□ 0.29
RNF40-201ENST00000324685 IGHV2-70DA0A0C4DH43 119 aa16.83■□□□□ 0.29
RNF40-201ENST00000324685 IGLC2P0DOY2 106 aa16.83■□□□□ 0.29
RNF40-201ENST00000324685 IGLC3P0DOY3 106 aa16.83■□□□□ 0.29
RNF40-201ENST00000324685 SRSF2Q01130 221 aaKnown RBP16.83■□□□□ 0.29
RNF40-201ENST00000324685 IGHV3-16A0A0C4DH30 117 aa16.83■□□□□ 0.28
RNF40-201ENST00000324685 PFN2P35080 140 aa16.83■□□□□ 0.28
RNF40-201ENST00000324685 THAP8Q8NA92 274 aa16.83■□□□□ 0.28
RNF40-201ENST00000324685 K7EP34 96 aa16.83■□□□□ 0.28
RNF40-201ENST00000324685 ETV2O00321 342 aaPredicted RBP16.83■□□□□ 0.28
RNF40-201ENST00000324685 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.83■□□□□ 0.28
RNF40-201ENST00000324685 C17orf58Q2M2W7 97 aa16.83■□□□□ 0.28
RNF40-201ENST00000324685 ANXA2RQ3ZCQ2 193 aa16.83■□□□□ 0.28
RNF40-201ENST00000324685 A0A1B0GUS0 222 aa16.82■□□□□ 0.28
RNF40-201ENST00000324685 CDKN1BP46527 198 aa16.82■□□□□ 0.28
RNF40-201ENST00000324685 ZNF726P1Q15940 193 aa16.82■□□□□ 0.28
RNF40-201ENST00000324685 SUMO4Q6EEV6 95 aa16.82■□□□□ 0.28
RNF40-201ENST00000324685 CFHR3Q02985 330 aa16.82■□□□□ 0.28
RNF40-201ENST00000324685 NDUFA12Q9UI09 145 aa16.81■□□□□ 0.28
RNF40-201ENST00000324685 FGF6P10767 208 aa16.81■□□□□ 0.28
RNF40-201ENST00000324685 RSPO3Q9BXY4 272 aaPredicted RBP16.81■□□□□ 0.28
RNF40-201ENST00000324685 Q6ZWC4 215 aa16.8■□□□□ 0.28
RNF40-201ENST00000324685 ZNRF2Q8NHG8 242 aa16.8■□□□□ 0.28
RNF40-201ENST00000324685 TRAV26-2A0A0B4J265 109 aa16.8■□□□□ 0.28
RNF40-201ENST00000324685 MMP23AO75900 390 aa16.8■□□□□ 0.28
RNF40-201ENST00000324685 CEND1Q8N111 149 aa16.8■□□□□ 0.28
RNF40-201ENST00000324685 KIF26BQ2KJY2 2108 aa16.8■□□□□ 0.28
RNF40-201ENST00000324685 TRAV13-2A0A0B4J235 113 aa16.8■□□□□ 0.28
RNF40-201ENST00000324685 PRSS57Q6UWY2 283 aa16.8■□□□□ 0.28
RNF40-201ENST00000324685 PYGO2Q9BRQ0 406 aa16.8■□□□□ 0.28
RNF40-201ENST00000324685 RNF223E7ERA6 249 aa16.8■□□□□ 0.28
RNF40-201ENST00000324685 SIGLEC8Q9NYZ4 499 aa16.8■□□□□ 0.28
RNF40-201ENST00000324685 DOCK3Q8IZD9 2030 aa16.79■□□□□ 0.28
RNF40-201ENST00000324685 TEX36Q5VZQ5 186 aa16.79■□□□□ 0.28
RNF40-201ENST00000324685 C3orf56Q8N813 242 aa16.79■□□□□ 0.28
RNF40-201ENST00000324685 C10orf91Q5T1B1 145 aa16.79■□□□□ 0.28
RNF40-201ENST00000324685 PRO1854Q9UHT4 67 aa16.79■□□□□ 0.28
RNF40-201ENST00000324685 TSSC4Q9Y5U2 329 aaPredicted RBP16.79■□□□□ 0.28
RNF40-201ENST00000324685 G3V318 75 aa16.78■□□□□ 0.28
RNF40-201ENST00000324685 HERVK_113P63121 156 aa16.78■□□□□ 0.28
RNF40-201ENST00000324685 SMIM2Q9BVW6 85 aa16.78■□□□□ 0.28
RNF40-201ENST00000324685 APOC4P55056 127 aa16.78■□□□□ 0.28
RNF40-201ENST00000324685 BOD1L2Q8IYS8 172 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms