RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 AMBPP02760 352 aa14.13□□□□□ -0.15
CCDC43-201ENST00000315286 MT-ND6P03923 174 aa14.13□□□□□ -0.15
CCDC43-201ENST00000315286 CT83Q5H943 113 aa14.13□□□□□ -0.15
CCDC43-201ENST00000315286 PYY3Q5JQD4 70 aa14.13□□□□□ -0.15
CCDC43-201ENST00000315286 KRTAP1-3Q8IUG1 177 aa14.13□□□□□ -0.15
CCDC43-201ENST00000315286 GBGT1Q8N5D6 347 aa14.13□□□□□ -0.15
CCDC43-201ENST00000315286 IGKV2-40A0A087WW87 121 aaPredicted RBP14.13□□□□□ -0.15
CCDC43-201ENST00000315286 A0A087X0K7 114 aa14.13□□□□□ -0.15
CCDC43-201ENST00000315286 CHEK1O14757 476 aa14.13□□□□□ -0.15
CCDC43-201ENST00000315286 IGKV2D-40P01614 121 aaPredicted RBP14.13□□□□□ -0.15
CCDC43-201ENST00000315286 TMEM95Q3KNT9 176 aa14.13□□□□□ -0.15
CCDC43-201ENST00000315286 C1orf194Q5T5A4 169 aa14.13□□□□□ -0.15
CCDC43-201ENST00000315286 TMEM256Q8N2U0 113 aa14.13□□□□□ -0.15
CCDC43-201ENST00000315286 GTSF1Q8WW33 167 aa14.13□□□□□ -0.15
CCDC43-201ENST00000315286 PACRGQ96M98 296 aaPredicted RBP14.13□□□□□ -0.15
CCDC43-201ENST00000315286 U3KQE9 123 aa14.13□□□□□ -0.15
CCDC43-201ENST00000315286 SERTM2A0A1B0GWG4 89 aa14.12□□□□□ -0.15
CCDC43-201ENST00000315286 ZNF705FA8MVS1 300 aaPredicted RBP14.12□□□□□ -0.15
CCDC43-201ENST00000315286 CFHR3Q02985 330 aa14.12□□□□□ -0.15
CCDC43-201ENST00000315286 HIST2H2BCQ6DN03 193 aa14.12□□□□□ -0.15
CCDC43-201ENST00000315286 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.12□□□□□ -0.15
CCDC43-201ENST00000315286 ARL6IP6Q8N6S5 226 aa14.12□□□□□ -0.15
CCDC43-201ENST00000315286 NIT2Q9NQR4 276 aa14.12□□□□□ -0.15
CCDC43-201ENST00000315286 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.11□□□□□ -0.15
CCDC43-201ENST00000315286 CRIP1P50238 77 aa14.11□□□□□ -0.15
CCDC43-201ENST00000315286 KIAA1644Q3SXP7 199 aa14.11□□□□□ -0.15
CCDC43-201ENST00000315286 WIPF2Q8TF74 440 aaPredicted RBP14.11□□□□□ -0.15
CCDC43-201ENST00000315286 C8orf49Q96NF6 230 aa14.11□□□□□ -0.15
CCDC43-201ENST00000315286 NUPR1O60356 82 aa14.11□□□□□ -0.15
CCDC43-201ENST00000315286 HLA-DQA1P01909 254 aa14.11□□□□□ -0.15
CCDC43-201ENST00000315286 CRISP2P16562 243 aa14.11□□□□□ -0.15
CCDC43-201ENST00000315286 GDF5OSQ5U4N7 250 aa14.11□□□□□ -0.15
CCDC43-201ENST00000315286 RASL11AQ6T310 242 aa14.11□□□□□ -0.15
CCDC43-201ENST00000315286 C16orf54Q6UWD8 224 aa14.11□□□□□ -0.15
CCDC43-201ENST00000315286 UNQ9165/PRO28630Q6UXU0 137 aa14.11□□□□□ -0.15
CCDC43-201ENST00000315286 LCN12Q6JVE5 192 aa14.1□□□□□ -0.15
CCDC43-201ENST00000315286 OR4X2Q8NGF9 303 aa14.1□□□□□ -0.15
CCDC43-201ENST00000315286 OR2D3Q8NGH3 330 aa14.1□□□□□ -0.15
CCDC43-201ENST00000315286 TP53TG3Q9ULZ0 132 aa14.1□□□□□ -0.15
CCDC43-201ENST00000315286 ZNF469Q96JG9 3925 aaPredicted RBP14.1□□□□□ -0.15
CCDC43-201ENST00000315286 GZMBP10144 247 aa14.1□□□□□ -0.15
CCDC43-201ENST00000315286 PLA2G2AP14555 144 aa14.1□□□□□ -0.15
CCDC43-201ENST00000315286 PRSS57Q6UWY2 283 aa14.1□□□□□ -0.15
CCDC43-201ENST00000315286 C9orf139Q6ZV77 190 aa14.1□□□□□ -0.15
CCDC43-201ENST00000315286 OR4B1Q8NGF8 309 aa14.1□□□□□ -0.15
CCDC43-201ENST00000315286 OR5R1Q8NH85 324 aa14.1□□□□□ -0.15
CCDC43-201ENST00000315286 VGLL1Q99990 258 aa14.1□□□□□ -0.15
CCDC43-201ENST00000315286 RNF182Q8N6D2 247 aa14.09□□□□□ -0.15
CCDC43-201ENST00000315286 PGLYRP4Q96LB8 373 aa14.09□□□□□ -0.15
CCDC43-201ENST00000315286 GFRA4Q9GZZ7 299 aa14.09□□□□□ -0.15
CCDC43-201ENST00000315286 ZNF580Q9UK33 172 aa14.09□□□□□ -0.15
CCDC43-201ENST00000315286 NDUFA4O00483 81 aa14.08□□□□□ -0.15
CCDC43-201ENST00000315286 CAMPP49913 170 aa14.08□□□□□ -0.15
CCDC43-201ENST00000315286 SLAQ13239 276 aa14.08□□□□□ -0.15
CCDC43-201ENST00000315286 Q6YL49 198 aa14.08□□□□□ -0.15
CCDC43-201ENST00000315286 A0A0G2JLM5 398 aa14.08□□□□□ -0.16
CCDC43-201ENST00000315286 A0A1B0GXF2 115 aa14.08□□□□□ -0.16
CCDC43-201ENST00000315286 APCSP02743 223 aa14.08□□□□□ -0.16
CCDC43-201ENST00000315286 ATP5L2Q7Z4Y8 100 aa14.08□□□□□ -0.16
CCDC43-201ENST00000315286 FAM231BA6NCW3 169 aa14.07□□□□□ -0.16
CCDC43-201ENST00000315286 PRAC2D3DTV9 90 aa14.07□□□□□ -0.16
CCDC43-201ENST00000315286 F2Z2F3 143 aa14.07□□□□□ -0.16
CCDC43-201ENST00000315286 CYB5R2Q6BCY4 276 aa14.07□□□□□ -0.16
CCDC43-201ENST00000315286 CDPF1Q6NVV7 123 aa14.07□□□□□ -0.16
CCDC43-201ENST00000315286 RBPMS2Q6ZRY4 209 aaKnown RBP14.07□□□□□ -0.16
CCDC43-201ENST00000315286 Q8TAT8 98 aa14.07□□□□□ -0.16
CCDC43-201ENST00000315286 PRR25Q96S07 402 aa14.07□□□□□ -0.16
CCDC43-201ENST00000315286 SLC50A1Q9BRV3 221 aa14.07□□□□□ -0.16
CCDC43-201ENST00000315286 VPREB3Q9UKI3 123 aa14.07□□□□□ -0.16
CCDC43-201ENST00000315286 ITPR3Q14573 2671 aa14.07□□□□□ -0.16
CCDC43-201ENST00000315286 J3QKU1 62 aa14.06□□□□□ -0.16
CCDC43-201ENST00000315286 LINC00310P59036 64 aa14.06□□□□□ -0.16
CCDC43-201ENST00000315286 Q0VG73 95 aa14.06□□□□□ -0.16
CCDC43-201ENST00000315286 TMEM18Q96B42 140 aa14.06□□□□□ -0.16
CCDC43-201ENST00000315286 HELZ2Q9BYK8 2649 aaKnown RBP14.06□□□□□ -0.16
CCDC43-201ENST00000315286 TRAV8-2A0A0B4J237 113 aa14.06□□□□□ -0.16
CCDC43-201ENST00000315286 SMAD7O15105 426 aaKnown RBP14.06□□□□□ -0.16
CCDC43-201ENST00000315286 CT45A10P0DMU9 189 aa14.06□□□□□ -0.16
CCDC43-201ENST00000315286 SAPCD1Q5SSQ6 148 aa14.06□□□□□ -0.16
CCDC43-201ENST00000315286 C8orf86Q6ZUL3 223 aa14.06□□□□□ -0.16
CCDC43-201ENST00000315286 GLMPQ8WWB7 406 aa14.06□□□□□ -0.16
CCDC43-201ENST00000315286 PSMG3-AS1Q96PY0 264 aa14.06□□□□□ -0.16
CCDC43-201ENST00000315286 TLN2Q9Y4G6 2542 aa14.06□□□□□ -0.16
CCDC43-201ENST00000315286 FBLL1A6NHQ2 334 aaKnown RBP14.05□□□□□ -0.16
CCDC43-201ENST00000315286 PSMB8P28062 276 aa14.05□□□□□ -0.16
CCDC43-201ENST00000315286 C10orf99Q6UWK7 81 aa14.05□□□□□ -0.16
CCDC43-201ENST00000315286 COX8CQ7Z4L0 72 aa14.05□□□□□ -0.16
CCDC43-201ENST00000315286 SSBP4Q9BWG4 385 aaPredicted RBP14.05□□□□□ -0.16
CCDC43-201ENST00000315286 SERF1AO75920 110 aa14.05□□□□□ -0.16
CCDC43-201ENST00000315286 SRIP30626 198 aa14.05□□□□□ -0.16
CCDC43-201ENST00000315286 ERCC8Q13216 396 aa14.05□□□□□ -0.16
CCDC43-201ENST00000315286 BAGE3Q86Y29 109 aa14.05□□□□□ -0.16
CCDC43-201ENST00000315286 CCDC168Q8NDH2 2452 aa14.04□□□□□ -0.16
CCDC43-201ENST00000315286 HOXA3O43365 443 aaPredicted RBP14.04□□□□□ -0.16
CCDC43-201ENST00000315286 FOXA3P55318 350 aaPredicted RBP14.04□□□□□ -0.16
CCDC43-201ENST00000315286 HBBP68871 147 aa14.04□□□□□ -0.16
CCDC43-201ENST00000315286 PRR31Q5SQ13 230 aa14.04□□□□□ -0.16
CCDC43-201ENST00000315286 WFDC11Q8NEX6 87 aa14.04□□□□□ -0.16
CCDC43-201ENST00000315286 NPFFR1Q9GZQ6 430 aa14.04□□□□□ -0.16
CCDC43-201ENST00000315286 A8MWP6 167 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms