RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 NSUN5P1Q3KNT7 163 aa11.05□□□□□ -0.64
CLCN6-201ENST00000312413 OR11H6Q8NGC7 330 aa11.05□□□□□ -0.64
CLCN6-201ENST00000312413 DAZ1Q9NQZ3 744 aaKnown RBP11.05□□□□□ -0.64
CLCN6-201ENST00000312413 ZNF726P1Q15940 193 aa11.05□□□□□ -0.64
CLCN6-201ENST00000312413 PIP4P2Q8N4L2 257 aa11.05□□□□□ -0.64
CLCN6-201ENST00000312413 WNK2Q9Y3S1 2297 aa11.04□□□□□ -0.64
CLCN6-201ENST00000312413 MRPL51Q4U2R6 128 aaKnown RBP11.04□□□□□ -0.64
CLCN6-201ENST00000312413 TMEM14BQ9NUH8 114 aa11.04□□□□□ -0.64
CLCN6-201ENST00000312413 RBMY1FQ15415 496 aaKnown RBP11.04□□□□□ -0.64
CLCN6-201ENST00000312413 UBE2E2Q96LR5 201 aa11.04□□□□□ -0.64
CLCN6-201ENST00000312413 C8orf49Q96NF6 230 aa11.04□□□□□ -0.64
CLCN6-201ENST00000312413 SMIM27A0A1W2PRY6 76 aa11.04□□□□□ -0.64
CLCN6-201ENST00000312413 RHODO00212 210 aa11.04□□□□□ -0.64
CLCN6-201ENST00000312413 ZNF114Q8NC26 417 aa11.04□□□□□ -0.64
CLCN6-201ENST00000312413 PRO1854Q9UHT4 67 aa11.04□□□□□ -0.64
CLCN6-201ENST00000312413 DOCK9Q9BZ29 2069 aa11.04□□□□□ -0.64
CLCN6-201ENST00000312413 TAL2Q16559 108 aa11.03□□□□□ -0.64
CLCN6-201ENST00000312413 KIAA2026Q5HYC2 2103 aa11.03□□□□□ -0.64
CLCN6-201ENST00000312413 TRBV19A0A075B6N1 114 aa11.03□□□□□ -0.64
CLCN6-201ENST00000312413 NDUFB8O95169 186 aa11.03□□□□□ -0.64
CLCN6-201ENST00000312413 ARID2Q68CP9 1835 aa11.03□□□□□ -0.64
CLCN6-201ENST00000312413 RBBP6Q7Z6E9 1792 aaKnown RBP11.03□□□□□ -0.64
CLCN6-201ENST00000312413 IL17RELQ6ZVW7 336 aa11.03□□□□□ -0.64
CLCN6-201ENST00000312413 RPL35AP18077 110 aaKnown RBP11.03□□□□□ -0.64
CLCN6-201ENST00000312413 DSCR9P59020 149 aa11.03□□□□□ -0.64
CLCN6-201ENST00000312413 BRD3OSQ6XYD6 125 aa11.03□□□□□ -0.64
CLCN6-201ENST00000312413 ROS1P08922 2347 aa11.02□□□□□ -0.64
CLCN6-201ENST00000312413 CNOT1A5YKK6 2376 aaKnown RBP11.02□□□□□ -0.64
CLCN6-201ENST00000312413 OVOL3O00110 214 aa11.02□□□□□ -0.64
CLCN6-201ENST00000312413 DKK1O94907 266 aa11.02□□□□□ -0.64
CLCN6-201ENST00000312413 CEND1Q8N111 149 aa11.02□□□□□ -0.64
CLCN6-201ENST00000312413 I3L3M4 83 aa11.02□□□□□ -0.65
CLCN6-201ENST00000312413 TRACP01848 142 aa11.02□□□□□ -0.65
CLCN6-201ENST00000312413 FHL1Q13642 323 aa11.02□□□□□ -0.65
CLCN6-201ENST00000312413 C17orf82Q86X59 251 aaPredicted RBP11.02□□□□□ -0.65
CLCN6-201ENST00000312413 HS3ST6Q96QI5 342 aa11.02□□□□□ -0.65
CLCN6-201ENST00000312413 H3BMG7 143 aa11.02□□□□□ -0.65
CLCN6-201ENST00000312413 MRPL35Q9NZE8 188 aaKnown RBP11.02□□□□□ -0.65
CLCN6-201ENST00000312413 AZU1P20160 251 aa11.01□□□□□ -0.65
CLCN6-201ENST00000312413 SIGLEC8Q9NYZ4 499 aa11.01□□□□□ -0.65
CLCN6-201ENST00000312413 HAMPP81172 84 aa11.01□□□□□ -0.65
CLCN6-201ENST00000312413 NDUFA4L2Q9NRX3 87 aa11.01□□□□□ -0.65
CLCN6-201ENST00000312413 SDHAF1A6NFY7 115 aa11.01□□□□□ -0.65
CLCN6-201ENST00000312413 HLA-DRB4P13762 266 aa11.01□□□□□ -0.65
CLCN6-201ENST00000312413 B3GALT5-AS1P59052 145 aa11.01□□□□□ -0.65
CLCN6-201ENST00000312413 LYPD2Q6UXB3 125 aa11.01□□□□□ -0.65
CLCN6-201ENST00000312413 MSRB2Q9Y3D2 182 aa11.01□□□□□ -0.65
CLCN6-201ENST00000312413 HLA-DRB4X5D2U9 266 aa11.01□□□□□ -0.65
CLCN6-201ENST00000312413 PSME4Q14997 1843 aa11.01□□□□□ -0.65
CLCN6-201ENST00000312413 SPTBN2O15020 2390 aa11.01□□□□□ -0.65
CLCN6-201ENST00000312413 NDUFA12Q9UI09 145 aa11.01□□□□□ -0.65
CLCN6-201ENST00000312413 ARFGEF3Q5TH69 2177 aa11.01□□□□□ -0.65
CLCN6-201ENST00000312413 B4DSR2 109 aa11□□□□□ -0.65
CLCN6-201ENST00000312413 F8VRH5 84 aa11□□□□□ -0.65
CLCN6-201ENST00000312413 SPACA3Q8IXA5 215 aa11□□□□□ -0.65
CLCN6-201ENST00000312413 KNCNA6PVL3 124 aa11□□□□□ -0.65
CLCN6-201ENST00000312413 SIVA1O15304 175 aa11□□□□□ -0.65
CLCN6-201ENST00000312413 NYNRINQ9P2P1 1898 aaKnown RBP11□□□□□ -0.65
CLCN6-201ENST00000312413 CACNA1GO43497 2377 aa11□□□□□ -0.65
CLCN6-201ENST00000312413 NCOR1O75376 2440 aa11□□□□□ -0.65
CLCN6-201ENST00000312413 Q0VFX4 171 aa11□□□□□ -0.65
CLCN6-201ENST00000312413 UBE2DNLQ8IWF7 75 aa11□□□□□ -0.65
CLCN6-201ENST00000312413 CSRP1P21291 193 aaKnown RBP11□□□□□ -0.65
CLCN6-201ENST00000312413 PFN2P35080 140 aa11□□□□□ -0.65
CLCN6-201ENST00000312413 VWC2Q2TAL6 325 aa11□□□□□ -0.65
CLCN6-201ENST00000312413 PRR25Q96S07 402 aa11□□□□□ -0.65
CLCN6-201ENST00000312413 CARD19Q96LW7 228 aa10.99□□□□□ -0.65
CLCN6-201ENST00000312413 FANCMQ8IYD8 2048 aa10.99□□□□□ -0.65
CLCN6-201ENST00000312413 DOCK11Q5JSL3 2073 aa10.99□□□□□ -0.65
CLCN6-201ENST00000312413 LMO1P25800 156 aa10.99□□□□□ -0.65
CLCN6-201ENST00000312413 DEFB131AP59861 70 aa10.99□□□□□ -0.65
CLCN6-201ENST00000312413 LOC285556D6RIA3 1793 aa10.99□□□□□ -0.65
CLCN6-201ENST00000312413 DOCK3Q8IZD9 2030 aa10.99□□□□□ -0.65
CLCN6-201ENST00000312413 GAGE12JA6NER3 117 aa10.99□□□□□ -0.65
CLCN6-201ENST00000312413 GAGE7O76087 117 aa10.99□□□□□ -0.65
CLCN6-201ENST00000312413 GAGE12FP0CL80 117 aa10.99□□□□□ -0.65
CLCN6-201ENST00000312413 GAGE12GP0CL81 117 aa10.99□□□□□ -0.65
CLCN6-201ENST00000312413 GAGE12IP0CL82 117 aa10.99□□□□□ -0.65
CLCN6-201ENST00000312413 GAGE4Q13068 117 aa10.99□□□□□ -0.65
CLCN6-201ENST00000312413 HLA-DMBP28068 263 aa10.99□□□□□ -0.65
CLCN6-201ENST00000312413 C11orf52Q96A22 123 aa10.99□□□□□ -0.65
CLCN6-201ENST00000312413 K7ERJ3 54 aa10.98□□□□□ -0.65
CLCN6-201ENST00000312413 C1orf147Q96MC9 270 aaPredicted RBP10.98□□□□□ -0.65
CLCN6-201ENST00000312413 MBD3L4A6NDZ8 208 aaPredicted RBP10.98□□□□□ -0.65
CLCN6-201ENST00000312413 MBD3L3A6NE82 208 aaPredicted RBP10.98□□□□□ -0.65
CLCN6-201ENST00000312413 MBD3L5A6NJ08 208 aaPredicted RBP10.98□□□□□ -0.65
CLCN6-201ENST00000312413 DEFB130BP0DP73 79 aa10.98□□□□□ -0.65
CLCN6-201ENST00000312413 DEFB130AP0DP74 79 aa10.98□□□□□ -0.65
CLCN6-201ENST00000312413 MDS2Q8NDY4 140 aa10.98□□□□□ -0.65
CLCN6-201ENST00000312413 MBD3L2Q8NHZ7 208 aaPredicted RBP10.98□□□□□ -0.65
CLCN6-201ENST00000312413 NPYP01303 97 aa10.98□□□□□ -0.65
CLCN6-201ENST00000312413 FAM110DQ8TAY7 271 aaPredicted RBP10.98□□□□□ -0.65
CLCN6-201ENST00000312413 SMIM2Q9BVW6 85 aa10.98□□□□□ -0.65
CLCN6-201ENST00000312413 TRAV26-2A0A0B4J265 109 aa10.98□□□□□ -0.65
CLCN6-201ENST00000312413 AMTNQ6UX39 209 aa10.98□□□□□ -0.65
CLCN6-201ENST00000312413 IGKV1-39P01597 117 aa10.98□□□□□ -0.65
CLCN6-201ENST00000312413 IGKV1D-39P04432 117 aa10.98□□□□□ -0.65
CLCN6-201ENST00000312413 SYNJ2BPP57105 145 aa10.98□□□□□ -0.65
CLCN6-201ENST00000312413 TMEM105Q8N8V8 129 aa10.98□□□□□ -0.65
CLCN6-201ENST00000312413 KLHL30-AS1Q8NEE0 82 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms