RNA–Protein interactions for RNA: ENST00000308466.12

MUC4-201, Transcript of mucin 4, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC4, Length 3,806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4-201ENST00000308466 LINC00311Q8N616 119 aa8.56□□□□□ -1.04
MUC4-201ENST00000308466 YPEL3P61236 119 aaPredicted RBP8.55□□□□□ -1.04
MUC4-201ENST00000308466 TSKUQ8WUA8 353 aa8.55□□□□□ -1.04
MUC4-201ENST00000308466 TNRC6BQ9UPQ9 1833 aaKnown RBP8.55□□□□□ -1.04
MUC4-201ENST00000308466 SPINK8P0C7L1 97 aa8.55□□□□□ -1.04
MUC4-201ENST00000308466 PSG3Q16557 428 aa8.55□□□□□ -1.04
MUC4-201ENST00000308466 PATE2Q6UY27 113 aa8.55□□□□□ -1.04
MUC4-201ENST00000308466 Q8N7P7 452 aa8.55□□□□□ -1.04
MUC4-201ENST00000308466 NEU4Q8WWR8 484 aaPredicted RBP8.55□□□□□ -1.04
MUC4-201ENST00000308466 FMC1Q96HJ9 113 aa8.55□□□□□ -1.04
MUC4-201ENST00000308466 FAM181BA6NEQ2 426 aa8.55□□□□□ -1.04
MUC4-201ENST00000308466 DMXL2Q8TDJ6 3036 aa8.55□□□□□ -1.04
MUC4-201ENST00000308466 NDUFS7O75251 213 aa8.54□□□□□ -1.04
MUC4-201ENST00000308466 IGLC1P0CG04 106 aa8.54□□□□□ -1.04
MUC4-201ENST00000308466 RPL7P18124 248 aaKnown RBP8.54□□□□□ -1.04
MUC4-201ENST00000308466 KIR3DS1Q14943 382 aa8.54□□□□□ -1.04
MUC4-201ENST00000308466 DEFB125Q8N687 156 aa8.54□□□□□ -1.04
MUC4-201ENST00000308466 MRAP2Q96G30 205 aa8.54□□□□□ -1.04
MUC4-201ENST00000308466 OTORQ9NRC9 128 aa8.54□□□□□ -1.04
MUC4-201ENST00000308466 KAAG1Q9UBP8 84 aa8.54□□□□□ -1.04
MUC4-201ENST00000308466 LINC00527Q9UJ94 153 aa8.54□□□□□ -1.04
MUC4-201ENST00000308466 HIST1H1AQ02539 215 aaPredicted RBP8.54□□□□□ -1.04
MUC4-201ENST00000308466 IGFL4Q6B9Z1 124 aa8.54□□□□□ -1.04
MUC4-201ENST00000308466 RBPMS2Q6ZRY4 209 aaKnown RBP8.54□□□□□ -1.04
MUC4-201ENST00000308466 RABAC1Q9UI14 185 aa8.54□□□□□ -1.04
MUC4-201ENST00000308466 H3BVH4 76 aa8.54□□□□□ -1.04
MUC4-201ENST00000308466 ATP5G2Q06055 141 aa8.54□□□□□ -1.04
MUC4-201ENST00000308466 TWIST1Q15672 202 aa8.54□□□□□ -1.04
MUC4-201ENST00000308466 LY6EQ16553 131 aa8.54□□□□□ -1.04
MUC4-201ENST00000308466 FXYD5Q96DB9 178 aa8.54□□□□□ -1.04
MUC4-201ENST00000308466 TMEM136Q6ZRR5 245 aa8.53□□□□□ -1.04
MUC4-201ENST00000308466 ZNF503Q96F45 646 aa8.53□□□□□ -1.04
MUC4-201ENST00000308466 PSG8Q9UQ74 426 aa8.53□□□□□ -1.04
MUC4-201ENST00000308466 A0A1B0GUT8 65 aa8.53□□□□□ -1.04
MUC4-201ENST00000308466 ZNF138P52744 262 aa8.53□□□□□ -1.04
MUC4-201ENST00000308466 C5orf64Q2M2E5 130 aa8.53□□□□□ -1.04
MUC4-201ENST00000308466 FAM167A-AS1Q96KT0 104 aa8.53□□□□□ -1.04
MUC4-201ENST00000308466 AKAP13Q12802 2813 aa8.53□□□□□ -1.04
MUC4-201ENST00000308466 S100A4P26447 101 aaKnown RBP8.53□□□□□ -1.04
MUC4-201ENST00000308466 CD300EQ496F6 205 aaPredicted RBP8.53□□□□□ -1.04
MUC4-201ENST00000308466 VMO1Q7Z5L0 202 aa8.53□□□□□ -1.04
MUC4-201ENST00000308466 SAMD5Q5TGI4 173 aa8.52□□□□□ -1.04
MUC4-201ENST00000308466 SH2D6Q7Z4S9 175 aa8.52□□□□□ -1.04
MUC4-201ENST00000308466 C1orf159Q96HA4 380 aa8.52□□□□□ -1.04
MUC4-201ENST00000308466 UFC1Q9Y3C8 167 aa8.52□□□□□ -1.04
MUC4-201ENST00000308466 MSRB2Q9Y3D2 182 aa8.52□□□□□ -1.04
MUC4-201ENST00000308466 PPIFP30405 207 aaKnown RBP8.52□□□□□ -1.05
MUC4-201ENST00000308466 CLEC19AQ6UXS0 136 aa8.52□□□□□ -1.05
MUC4-201ENST00000308466 A1L4Q6 167 aa8.52□□□□□ -1.05
MUC4-201ENST00000308466 OR10J3Q5JRS4 329 aa8.52□□□□□ -1.05
MUC4-201ENST00000308466 SP5Q6BEB4 398 aaPredicted RBP8.52□□□□□ -1.05
MUC4-201ENST00000308466 NHP2Q9NX24 153 aaKnown RBP8.52□□□□□ -1.05
MUC4-201ENST00000308466 TP53TG3Q9ULZ0 132 aa8.52□□□□□ -1.05
MUC4-201ENST00000308466 CKS2P33552 79 aa8.51□□□□□ -1.05
MUC4-201ENST00000308466 OR5A1Q8NGJ0 315 aa8.51□□□□□ -1.05
MUC4-201ENST00000308466 C17orf77Q96MU5 243 aa8.51□□□□□ -1.05
MUC4-201ENST00000308466 HIVEP3Q5T1R4 2406 aa8.51□□□□□ -1.05
MUC4-201ENST00000308466 TGFAP01135 160 aa8.51□□□□□ -1.05
MUC4-201ENST00000308466 IGLV2-23P01705 113 aa8.51□□□□□ -1.05
MUC4-201ENST00000308466 RHOGP84095 191 aa8.51□□□□□ -1.05
MUC4-201ENST00000308466 PVRIGQ6DKI7 326 aa8.51□□□□□ -1.05
MUC4-201ENST00000308466 SMIM13P0DJ93 91 aa8.51□□□□□ -1.05
MUC4-201ENST00000308466 PRTN3P24158 256 aa8.51□□□□□ -1.05
MUC4-201ENST00000308466 ZNF418Q8TF45 676 aaPredicted RBP8.51□□□□□ -1.05
MUC4-201ENST00000308466 AP5S1Q9NUS5 200 aa8.51□□□□□ -1.05
MUC4-201ENST00000308466 IGKV2-40A0A087WW87 121 aaPredicted RBP8.5□□□□□ -1.05
MUC4-201ENST00000308466 NPIPB5A8MRT5 1133 aa8.5□□□□□ -1.05
MUC4-201ENST00000308466 K7EP34 96 aa8.5□□□□□ -1.05
MUC4-201ENST00000308466 IGKV2D-40P01614 121 aaPredicted RBP8.5□□□□□ -1.05
MUC4-201ENST00000308466 TMEM219Q86XT9 240 aa8.5□□□□□ -1.05
MUC4-201ENST00000308466 TET2Q6N021 2002 aaPredicted RBP8.5□□□□□ -1.05
MUC4-201ENST00000308466 APOHP02749 345 aaPredicted RBP8.5□□□□□ -1.05
MUC4-201ENST00000308466 PF4V1P10720 104 aa8.5□□□□□ -1.05
MUC4-201ENST00000308466 CTRLP40313 264 aa8.5□□□□□ -1.05
MUC4-201ENST00000308466 DLX6P56179 175 aa8.5□□□□□ -1.05
MUC4-201ENST00000308466 Q0VG73 95 aa8.5□□□□□ -1.05
MUC4-201ENST00000308466 WFDC3Q8IUB2 231 aa8.5□□□□□ -1.05
MUC4-201ENST00000308466 THAP8Q8NA92 274 aa8.5□□□□□ -1.05
MUC4-201ENST00000308466 C18orf32Q8TCD1 76 aa8.5□□□□□ -1.05
MUC4-201ENST00000308466 LINC00574Q9H8X3 128 aa8.5□□□□□ -1.05
MUC4-201ENST00000308466 LOC107984156A0A0G2JMH3 177 aa8.5□□□□□ -1.05
MUC4-201ENST00000308466 TTC32Q5I0X7 151 aa8.5□□□□□ -1.05
MUC4-201ENST00000308466 EBLN2Q6P2I7 272 aa8.5□□□□□ -1.05
MUC4-201ENST00000308466 ARL17AQ8IVW1 177 aa8.5□□□□□ -1.05
MUC4-201ENST00000308466 C3orf56Q8N813 242 aa8.5□□□□□ -1.05
MUC4-201ENST00000308466 Q8TAT8 98 aa8.5□□□□□ -1.05
MUC4-201ENST00000308466 PRSS1P07477 247 aa8.49□□□□□ -1.05
MUC4-201ENST00000308466 SEC11AP67812 179 aa8.49□□□□□ -1.05
MUC4-201ENST00000308466 PRSS57Q6UWY2 283 aa8.49□□□□□ -1.05
MUC4-201ENST00000308466 LCNL1Q6ZST4 164 aa8.49□□□□□ -1.05
MUC4-201ENST00000308466 NPFFR1Q9GZQ6 430 aa8.49□□□□□ -1.05
MUC4-201ENST00000308466 IGLV1-47P01700 117 aa8.49□□□□□ -1.05
MUC4-201ENST00000308466 AMTNQ6UX39 209 aa8.49□□□□□ -1.05
MUC4-201ENST00000308466 RNF5Q99942 180 aa8.49□□□□□ -1.05
MUC4-201ENST00000308466 PTPN13Q12923 2485 aa8.49□□□□□ -1.05
MUC4-201ENST00000308466 SMIM27A0A1W2PRY6 76 aa8.49□□□□□ -1.05
MUC4-201ENST00000308466 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.49□□□□□ -1.05
MUC4-201ENST00000308466 C15orf32Q32M92 178 aa8.49□□□□□ -1.05
MUC4-201ENST00000308466 TMEM78Q5T7P6 136 aa8.49□□□□□ -1.05
MUC4-201ENST00000308466 RNF183Q96D59 192 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 132.5 ms