RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 C19orf84I3L1E1 186 aa8.54□□□□□ -1.04
SYNPO2-201ENST00000307142 LURAP1LQ8IV03 231 aa8.54□□□□□ -1.04
SYNPO2-201ENST00000307142 LYPD1Q8N2G4 141 aa8.54□□□□□ -1.04
SYNPO2-201ENST00000307142 C14orf178Q8N769 122 aaPredicted RBP8.54□□□□□ -1.04
SYNPO2-201ENST00000307142 TCRAP04437 139 aa8.54□□□□□ -1.04
SYNPO2-201ENST00000307142 SCGB1A1P11684 91 aa8.54□□□□□ -1.04
SYNPO2-201ENST00000307142 SS18Q15532 418 aa8.54□□□□□ -1.04
SYNPO2-201ENST00000307142 LIME1Q9H400 295 aa8.54□□□□□ -1.04
SYNPO2-201ENST00000307142 A0A0G2JRQ6 117 aa8.53□□□□□ -1.04
SYNPO2-201ENST00000307142 A0A0U1RRA0 63 aa8.53□□□□□ -1.04
SYNPO2-201ENST00000307142 SSBP2P81877 361 aaPredicted RBP8.53□□□□□ -1.04
SYNPO2-201ENST00000307142 LYZL1Q6UWQ5 148 aa8.53□□□□□ -1.04
SYNPO2-201ENST00000307142 TMEM14EPQ6UXP3 125 aa8.53□□□□□ -1.04
SYNPO2-201ENST00000307142 GP9P14770 177 aa8.53□□□□□ -1.04
SYNPO2-201ENST00000307142 RSPO1Q2MKA7 263 aaPredicted RBP8.53□□□□□ -1.04
SYNPO2-201ENST00000307142 TCF23Q7RTU1 214 aa8.53□□□□□ -1.04
SYNPO2-201ENST00000307142 GOLGB1Q14789 3259 aaKnown RBP8.53□□□□□ -1.04
SYNPO2-201ENST00000307142 SHANK1Q9Y566 2161 aa8.53□□□□□ -1.04
SYNPO2-201ENST00000307142 LSM4Q9Y4Z0 139 aaKnown RBP8.53□□□□□ -1.04
SYNPO2-201ENST00000307142 MED13LQ71F56 2210 aa8.53□□□□□ -1.04
SYNPO2-201ENST00000307142 ZNF134P52741 427 aa8.53□□□□□ -1.04
SYNPO2-201ENST00000307142 S100A7L2Q5SY68 101 aa8.53□□□□□ -1.04
SYNPO2-201ENST00000307142 RPP25LQ8N5L8 163 aaKnown RBP8.53□□□□□ -1.04
SYNPO2-201ENST00000307142 OSTCQ9NRP0 149 aa8.53□□□□□ -1.04
SYNPO2-201ENST00000307142 CHTOPQ9Y3Y2 248 aaKnown RBP8.52□□□□□ -1.04
SYNPO2-201ENST00000307142 IGHV7-4-1A0A0J9YVY3 117 aa8.52□□□□□ -1.05
SYNPO2-201ENST00000307142 FOXE3Q13461 319 aa8.52□□□□□ -1.05
SYNPO2-201ENST00000307142 LAGE3Q14657 143 aa8.52□□□□□ -1.05
SYNPO2-201ENST00000307142 FAM19A2Q8N3H0 131 aa8.52□□□□□ -1.05
SYNPO2-201ENST00000307142 A0A096LPF7 62 aa8.52□□□□□ -1.05
SYNPO2-201ENST00000307142 PPBPP02775 128 aa8.52□□□□□ -1.05
SYNPO2-201ENST00000307142 ZFP36P26651 326 aaKnown RBP8.52□□□□□ -1.05
SYNPO2-201ENST00000307142 YPEL3P61236 119 aaPredicted RBP8.52□□□□□ -1.05
SYNPO2-201ENST00000307142 C1orf159Q96HA4 380 aa8.52□□□□□ -1.05
SYNPO2-201ENST00000307142 AGMATQ9BSE5 352 aa8.52□□□□□ -1.05
SYNPO2-201ENST00000307142 INAFM1C9JVW0 142 aa8.52□□□□□ -1.05
SYNPO2-201ENST00000307142 STAG3L3P0CL85 134 aa8.52□□□□□ -1.05
SYNPO2-201ENST00000307142 CGB7P0DN87 165 aa8.52□□□□□ -1.05
SYNPO2-201ENST00000307142 SLC25A34Q6PIV7 304 aa8.52□□□□□ -1.05
SYNPO2-201ENST00000307142 GAGE12JA6NER3 117 aa8.52□□□□□ -1.05
SYNPO2-201ENST00000307142 NCR2O95944 276 aa8.52□□□□□ -1.05
SYNPO2-201ENST00000307142 GAGE1Q13065 139 aa8.52□□□□□ -1.05
SYNPO2-201ENST00000307142 GAGE4Q13068 117 aa8.52□□□□□ -1.05
SYNPO2-201ENST00000307142 GAGE5Q13069 117 aa8.52□□□□□ -1.05
SYNPO2-201ENST00000307142 GAGE13Q4V321 117 aa8.52□□□□□ -1.05
SYNPO2-201ENST00000307142 TSKUQ8WUA8 353 aa8.52□□□□□ -1.05
SYNPO2-201ENST00000307142 IGF2BP2-AS1Q96M15 143 aa8.52□□□□□ -1.05
SYNPO2-201ENST00000307142 H3BUA1 57 aa8.52□□□□□ -1.05
SYNPO2-201ENST00000307142 WISP2O76076 250 aa8.52□□□□□ -1.05
SYNPO2-201ENST00000307142 APOMO95445 188 aa8.51□□□□□ -1.05
SYNPO2-201ENST00000307142 LHBP01229 141 aa8.51□□□□□ -1.05
SYNPO2-201ENST00000307142 PLA2G2AP14555 144 aa8.51□□□□□ -1.05
SYNPO2-201ENST00000307142 OR11H6Q8NGC7 330 aa8.51□□□□□ -1.05
SYNPO2-201ENST00000307142 LGALS1P09382 135 aaKnown RBP8.51□□□□□ -1.05
SYNPO2-201ENST00000307142 BCL6BQ8N143 479 aaPredicted RBP8.51□□□□□ -1.05
SYNPO2-201ENST00000307142 TTC9CQ8N5M4 171 aa8.51□□□□□ -1.05
SYNPO2-201ENST00000307142 TMEM86BQ8N661 226 aa8.51□□□□□ -1.05
SYNPO2-201ENST00000307142 BLCAPP62952 87 aa8.51□□□□□ -1.05
SYNPO2-201ENST00000307142 TMEM190Q8WZ59 177 aa8.51□□□□□ -1.05
SYNPO2-201ENST00000307142 NOTCH3Q9UM47 2321 aa8.51□□□□□ -1.05
SYNPO2-201ENST00000307142 FNDC10F2Z333 226 aa8.51□□□□□ -1.05
SYNPO2-201ENST00000307142 TRAV9-1A0A075B6T8 112 aa8.51□□□□□ -1.05
SYNPO2-201ENST00000307142 CDKN1BP46527 198 aa8.51□□□□□ -1.05
SYNPO2-201ENST00000307142 PET117Q6UWS5 81 aa8.51□□□□□ -1.05
SYNPO2-201ENST00000307142 CSTL1Q9H114 145 aa8.51□□□□□ -1.05
SYNPO2-201ENST00000307142 PKIAP61925 76 aa8.51□□□□□ -1.05
SYNPO2-201ENST00000307142 FAM90A2PQ658T7 463 aa8.51□□□□□ -1.05
SYNPO2-201ENST00000307142 Q6ZRM9 215 aa8.51□□□□□ -1.05
SYNPO2-201ENST00000307142 PDE6HQ13956 83 aa8.5□□□□□ -1.05
SYNPO2-201ENST00000307142 TEX43Q6ZNM6 134 aa8.5□□□□□ -1.05
SYNPO2-201ENST00000307142 FABP2P12104 132 aa8.5□□□□□ -1.05
SYNPO2-201ENST00000307142 PRR31Q5SQ13 230 aa8.5□□□□□ -1.05
SYNPO2-201ENST00000307142 C8orf49Q96NF6 230 aa8.5□□□□□ -1.05
SYNPO2-201ENST00000307142 PMCHL2Q9BQD1 86 aa8.5□□□□□ -1.05
SYNPO2-201ENST00000307142 CST9LQ9H4G1 147 aa8.5□□□□□ -1.05
SYNPO2-201ENST00000307142 LOC102724200A0A096LPH7 203 aaPredicted RBP8.5□□□□□ -1.05
SYNPO2-201ENST00000307142 SNAI2O43623 268 aa8.5□□□□□ -1.05
SYNPO2-201ENST00000307142 ADMP35318 185 aa8.5□□□□□ -1.05
SYNPO2-201ENST00000307142 MRPL16Q9NX20 251 aaKnown RBP8.5□□□□□ -1.05
SYNPO2-201ENST00000307142 TRAV13-1A0A0B4J241 112 aa8.49□□□□□ -1.05
SYNPO2-201ENST00000307142 VCYO14598 125 aa8.49□□□□□ -1.05
SYNPO2-201ENST00000307142 C6orf226Q5I0X4 101 aa8.49□□□□□ -1.05
SYNPO2-201ENST00000307142 C1orf194Q5T5A4 169 aa8.49□□□□□ -1.05
SYNPO2-201ENST00000307142 C11orf53Q8IXP5 236 aa8.49□□□□□ -1.05
SYNPO2-201ENST00000307142 D6R8Y8 96 aa8.49□□□□□ -1.05
SYNPO2-201ENST00000307142 ZNF561-AS1K7EIQ3 104 aa8.49□□□□□ -1.05
SYNPO2-201ENST00000307142 HBDP02042 147 aa8.49□□□□□ -1.05
SYNPO2-201ENST00000307142 FBXL19-AS1Q494R0 122 aa8.49□□□□□ -1.05
SYNPO2-201ENST00000307142 LINC00614P0C842 121 aa8.49□□□□□ -1.05
SYNPO2-201ENST00000307142 NPC2P61916 151 aa8.49□□□□□ -1.05
SYNPO2-201ENST00000307142 APRG1Q8IVJ8 170 aa8.49□□□□□ -1.05
SYNPO2-201ENST00000307142 DNAJC9-AS1A6NH13 148 aa8.48□□□□□ -1.05
SYNPO2-201ENST00000307142 TRBV25-1A0A075B6N4 114 aa8.48□□□□□ -1.05
SYNPO2-201ENST00000307142 IGHV1OR15-1A0A075B7D0 117 aa8.48□□□□□ -1.05
SYNPO2-201ENST00000307142 CD300EQ496F6 205 aaPredicted RBP8.48□□□□□ -1.05
SYNPO2-201ENST00000307142 MBD3L1Q8WWY6 194 aa8.48□□□□□ -1.05
SYNPO2-201ENST00000307142 MS4A6AQ9H2W1 248 aa8.48□□□□□ -1.05
SYNPO2-201ENST00000307142 COL5A1P20908 1838 aaPredicted RBP8.48□□□□□ -1.05
SYNPO2-201ENST00000307142 WFDC11Q8NEX6 87 aa8.48□□□□□ -1.05
SYNPO2-201ENST00000307142 IGLV2-23P01705 113 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms