RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 TSKUQ8WUA8 353 aa13.87□□□□□ -0.19
CAPN1-201ENST00000279247 MBD6Q96DN6 1003 aa13.87□□□□□ -0.19
CAPN1-201ENST00000279247 PSG3Q16557 428 aa13.86□□□□□ -0.19
CAPN1-201ENST00000279247 SORL1Q92673 2214 aa13.86□□□□□ -0.19
CAPN1-201ENST00000279247 TRAV9-1A0A075B6T8 112 aa13.86□□□□□ -0.19
CAPN1-201ENST00000279247 MUC21A0A0G2JKD1 596 aa13.86□□□□□ -0.19
CAPN1-201ENST00000279247 MUC21A0A140T8X8 626 aa13.86□□□□□ -0.19
CAPN1-201ENST00000279247 ARL3P36405 182 aa13.86□□□□□ -0.19
CAPN1-201ENST00000279247 MUC21Q5SSG8 566 aa13.86□□□□□ -0.19
CAPN1-201ENST00000279247 GTSF1Q8WW33 167 aa13.86□□□□□ -0.19
CAPN1-201ENST00000279247 MTORP42345 2549 aa13.86□□□□□ -0.19
CAPN1-201ENST00000279247 SERF1AO75920 110 aa13.85□□□□□ -0.19
CAPN1-201ENST00000279247 GDF5OSQ5U4N7 250 aa13.85□□□□□ -0.19
CAPN1-201ENST00000279247 C10orf99Q6UWK7 81 aa13.85□□□□□ -0.19
CAPN1-201ENST00000279247 VGLL1Q99990 258 aa13.85□□□□□ -0.19
CAPN1-201ENST00000279247 CHEK1O14757 476 aa13.85□□□□□ -0.19
CAPN1-201ENST00000279247 UNQ9165/PRO28630Q6UXU0 137 aa13.85□□□□□ -0.19
CAPN1-201ENST00000279247 Q96MF0 132 aa13.85□□□□□ -0.19
CAPN1-201ENST00000279247 GNB1LQ9BYB4 327 aa13.85□□□□□ -0.19
CAPN1-201ENST00000279247 FLNBO75369 2602 aaKnown RBP13.85□□□□□ -0.19
CAPN1-201ENST00000279247 TRBV7-1A0A0A6YYK4 115 aa13.85□□□□□ -0.19
CAPN1-201ENST00000279247 CLPSL1A2RUU4 121 aa13.85□□□□□ -0.19
CAPN1-201ENST00000279247 BUB3O43684 328 aa13.85□□□□□ -0.19
CAPN1-201ENST00000279247 TP53TG3Q9ULZ0 132 aa13.85□□□□□ -0.19
CAPN1-201ENST00000279247 APCSP02743 223 aa13.84□□□□□ -0.19
CAPN1-201ENST00000279247 ERCC8Q13216 396 aa13.84□□□□□ -0.19
CAPN1-201ENST00000279247 TMEM18Q96B42 140 aa13.84□□□□□ -0.19
CAPN1-201ENST00000279247 METTL26Q96S19 204 aa13.84□□□□□ -0.19
CAPN1-201ENST00000279247 GSN-AS1Q9NRJ2 163 aa13.84□□□□□ -0.19
CAPN1-201ENST00000279247 A8MWL6 223 aa13.84□□□□□ -0.19
CAPN1-201ENST00000279247 RPL11P62913 178 aaKnown RBP13.84□□□□□ -0.19
CAPN1-201ENST00000279247 RELQ04864 619 aaPredicted RBP13.84□□□□□ -0.19
CAPN1-201ENST00000279247 IQCJQ1A5X6 159 aa13.84□□□□□ -0.19
CAPN1-201ENST00000279247 WDR73Q6P4I2 378 aa13.84□□□□□ -0.19
CAPN1-201ENST00000279247 CR1P17927 2039 aa13.83□□□□□ -0.19
CAPN1-201ENST00000279247 AKAP9Q99996 3911 aa13.83□□□□□ -0.19
CAPN1-201ENST00000279247 PRAC2D3DTV9 90 aa13.83□□□□□ -0.19
CAPN1-201ENST00000279247 DEFB113Q30KQ7 82 aa13.83□□□□□ -0.19
CAPN1-201ENST00000279247 IL17RELQ6ZVW7 336 aa13.83□□□□□ -0.19
CAPN1-201ENST00000279247 A0A096LNT2 108 aa13.83□□□□□ -0.2
CAPN1-201ENST00000279247 C19orf71A6NCJ1 209 aa13.83□□□□□ -0.2
CAPN1-201ENST00000279247 ZNF253O75346 499 aa13.83□□□□□ -0.2
CAPN1-201ENST00000279247 IGHG2P01859 326 aa13.83□□□□□ -0.2
CAPN1-201ENST00000279247 LYPD1Q8N2G4 141 aa13.83□□□□□ -0.2
CAPN1-201ENST00000279247 CT45A10P0DMU9 189 aa13.82□□□□□ -0.2
CAPN1-201ENST00000279247 PSG9Q00887 426 aa13.82□□□□□ -0.2
CAPN1-201ENST00000279247 COA6Q5JTJ3 125 aaKnown RBP13.82□□□□□ -0.2
CAPN1-201ENST00000279247 TMEM75Q8N9X5 138 aa13.82□□□□□ -0.2
CAPN1-201ENST00000279247 CRIP1P50238 77 aa13.82□□□□□ -0.2
CAPN1-201ENST00000279247 PDE6HQ13956 83 aa13.82□□□□□ -0.2
CAPN1-201ENST00000279247 SAMD10Q9BYL1 202 aa13.82□□□□□ -0.2
CAPN1-201ENST00000279247 BEX4Q9NWD9 120 aaPredicted RBP13.82□□□□□ -0.2
CAPN1-201ENST00000279247 SMAD7O15105 426 aaKnown RBP13.82□□□□□ -0.2
CAPN1-201ENST00000279247 FOXA3P55318 350 aaPredicted RBP13.82□□□□□ -0.2
CAPN1-201ENST00000279247 RCHY1Q96PM5 261 aa13.82□□□□□ -0.2
CAPN1-201ENST00000279247 HLA-DQA1P01909 254 aa13.81□□□□□ -0.2
CAPN1-201ENST00000279247 ZNF705DP0CH99 300 aaPredicted RBP13.81□□□□□ -0.2
CAPN1-201ENST00000279247 ZNF705BP0CI00 300 aaPredicted RBP13.81□□□□□ -0.2
CAPN1-201ENST00000279247 LCN12Q6JVE5 192 aa13.81□□□□□ -0.2
CAPN1-201ENST00000279247 PRSS22Q9GZN4 317 aa13.81□□□□□ -0.2
CAPN1-201ENST00000279247 PRO1933Q9H354 126 aa13.81□□□□□ -0.2
CAPN1-201ENST00000279247 LINC00310P59036 64 aa13.81□□□□□ -0.2
CAPN1-201ENST00000279247 WFDC11Q8NEX6 87 aa13.81□□□□□ -0.2
CAPN1-201ENST00000279247 OR4X2Q8NGF9 303 aa13.81□□□□□ -0.2
CAPN1-201ENST00000279247 NF1P21359 2839 aa13.81□□□□□ -0.2
CAPN1-201ENST00000279247 PPIFP30405 207 aaKnown RBP13.8□□□□□ -0.2
CAPN1-201ENST00000279247 IGHG4P01861 327 aa13.8□□□□□ -0.2
CAPN1-201ENST00000279247 MT-ND6P03923 174 aa13.8□□□□□ -0.2
CAPN1-201ENST00000279247 IGF1P05019 195 aa13.8□□□□□ -0.2
CAPN1-201ENST00000279247 IGHV4-31P0DP07 118 aa13.8□□□□□ -0.2
CAPN1-201ENST00000279247 PMCHP20382 165 aa13.8□□□□□ -0.2
CAPN1-201ENST00000279247 GATA3P23771 443 aa13.8□□□□□ -0.2
CAPN1-201ENST00000279247 C19orf54Q5BKX5 351 aa13.8□□□□□ -0.2
CAPN1-201ENST00000279247 FAM223BA6NKX1 122 aa13.8□□□□□ -0.2
CAPN1-201ENST00000279247 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.8□□□□□ -0.2
CAPN1-201ENST00000279247 FAM223AQ8IWN6 122 aa13.8□□□□□ -0.2
CAPN1-201ENST00000279247 ZFP30Q9Y2G7 519 aa13.8□□□□□ -0.2
CAPN1-201ENST00000279247 LINC00587B1AMM8 73 aa13.79□□□□□ -0.2
CAPN1-201ENST00000279247 J3KRW8 73 aa13.79□□□□□ -0.2
CAPN1-201ENST00000279247 SRD5A1P18405 259 aa13.79□□□□□ -0.2
CAPN1-201ENST00000279247 DEFB1P60022 68 aa13.79□□□□□ -0.2
CAPN1-201ENST00000279247 SMIM12Q96EX1 92 aa13.79□□□□□ -0.2
CAPN1-201ENST00000279247 ZNF492Q9P255 531 aa13.79□□□□□ -0.2
CAPN1-201ENST00000279247 M0QZK8 103 aa13.78□□□□□ -0.2
CAPN1-201ENST00000279247 SCGB1D1O95968 90 aa13.78□□□□□ -0.2
CAPN1-201ENST00000279247 NTF3P20783 257 aa13.78□□□□□ -0.2
CAPN1-201ENST00000279247 FAM19A2Q8N3H0 131 aa13.78□□□□□ -0.2
CAPN1-201ENST00000279247 EDN2P20800 178 aa13.78□□□□□ -0.2
CAPN1-201ENST00000279247 HBBP68871 147 aa13.78□□□□□ -0.2
CAPN1-201ENST00000279247 RBPMS2Q6ZRY4 209 aaKnown RBP13.78□□□□□ -0.2
CAPN1-201ENST00000279247 WNK1Q9H4A3 2382 aa13.78□□□□□ -0.2
CAPN1-201ENST00000279247 M0QZ24 198 aa13.77□□□□□ -0.2
CAPN1-201ENST00000279247 RAB9AP51151 201 aa13.77□□□□□ -0.2
CAPN1-201ENST00000279247 ARMS2P0C7Q2 107 aa13.77□□□□□ -0.21
CAPN1-201ENST00000279247 SH2D1AO60880 128 aa13.77□□□□□ -0.21
CAPN1-201ENST00000279247 ZNF80P51504 273 aaPredicted RBP13.77□□□□□ -0.21
CAPN1-201ENST00000279247 HIST2H2BDQ6DRA6 164 aa13.77□□□□□ -0.21
CAPN1-201ENST00000279247 C8orf86Q6ZUL3 223 aa13.77□□□□□ -0.21
CAPN1-201ENST00000279247 PRR25Q96S07 402 aa13.77□□□□□ -0.21
CAPN1-201ENST00000279247 TM4SF20Q53R12 229 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms