RNA–Protein interactions for RNA: ENST00000277549.9

CACNA1B-201, Transcript of calcium voltage-gated channel subunit alpha1 B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1B, Length 7,158 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1B-201ENST00000277549 H0YIZ8 118 aa16.34■□□□□ 0.21
CACNA1B-201ENST00000277549 HS3ST6Q96QI5 342 aa16.34■□□□□ 0.21
CACNA1B-201ENST00000277549 CHKB-CPT1BH3BT56 60 aa16.34■□□□□ 0.21
CACNA1B-201ENST00000277549 IGHV1OR15-1A0A075B7D0 117 aa16.34■□□□□ 0.21
CACNA1B-201ENST00000277549 IGHV4-59P01825 116 aa16.34■□□□□ 0.21
CACNA1B-201ENST00000277549 FAM90A9PA6NNJ1 464 aa16.34■□□□□ 0.21
CACNA1B-201ENST00000277549 YLPM1P49750 1951 aaKnown RBP16.33■□□□□ 0.21
CACNA1B-201ENST00000277549 Q6ZS92 163 aa16.33■□□□□ 0.21
CACNA1B-201ENST00000277549 RNASE2P10153 161 aaKnown RBP16.33■□□□□ 0.2
CACNA1B-201ENST00000277549 PARP14Q460N5 1801 aa16.33■□□□□ 0.2
CACNA1B-201ENST00000277549 DEFB112Q30KQ8 113 aa16.33■□□□□ 0.2
CACNA1B-201ENST00000277549 ZC2HC1BQ5TFG8 222 aa16.33■□□□□ 0.2
CACNA1B-201ENST00000277549 OVOL2Q9BRP0 275 aa16.33■□□□□ 0.2
CACNA1B-201ENST00000277549 A0A1W2PPI3 338 aa16.33■□□□□ 0.2
CACNA1B-201ENST00000277549 PSME4Q14997 1843 aa16.32■□□□□ 0.2
CACNA1B-201ENST00000277549 LOC285556D6RIA3 1793 aa16.32■□□□□ 0.2
CACNA1B-201ENST00000277549 NDUFS7O75251 213 aa16.32■□□□□ 0.2
CACNA1B-201ENST00000277549 BUB3O43684 328 aa16.32■□□□□ 0.2
CACNA1B-201ENST00000277549 GTSF1LQ9H1H1 148 aa16.32■□□□□ 0.2
CACNA1B-201ENST00000277549 CARHSP1Q9Y2V2 147 aaKnown RBP16.32■□□□□ 0.2
CACNA1B-201ENST00000277549 SLURP1P55000 103 aa16.32■□□□□ 0.2
CACNA1B-201ENST00000277549 PIFOQ8TCI5 191 aa16.32■□□□□ 0.2
CACNA1B-201ENST00000277549 SMPXQ9UHP9 88 aa16.32■□□□□ 0.2
CACNA1B-201ENST00000277549 ZNF503Q96F45 646 aa16.31■□□□□ 0.2
CACNA1B-201ENST00000277549 F6UB75 175 aa16.31■□□□□ 0.2
CACNA1B-201ENST00000277549 CCL24O00175 119 aa16.31■□□□□ 0.2
CACNA1B-201ENST00000277549 Q6P435 159 aa16.31■□□□□ 0.2
CACNA1B-201ENST00000277549 Q86TA4 180 aa16.31■□□□□ 0.2
CACNA1B-201ENST00000277549 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.31■□□□□ 0.2
CACNA1B-201ENST00000277549 IGKV2-29A2NJV5 120 aaPredicted RBP16.31■□□□□ 0.2
CACNA1B-201ENST00000277549 IGLV3-32A0A0A0MS00 114 aa16.3■□□□□ 0.2
CACNA1B-201ENST00000277549 GATA3P23771 443 aa16.3■□□□□ 0.2
CACNA1B-201ENST00000277549 LMO1P25800 156 aa16.3■□□□□ 0.2
CACNA1B-201ENST00000277549 GFI1Q99684 422 aa16.3■□□□□ 0.2
CACNA1B-201ENST00000277549 BRWD3Q6RI45 1802 aa16.3■□□□□ 0.2
CACNA1B-201ENST00000277549 PTPRFP10586 1907 aa16.3■□□□□ 0.2
CACNA1B-201ENST00000277549 GRNP28799 593 aaKnown RBP16.3■□□□□ 0.2
CACNA1B-201ENST00000277549 KIR3DS1Q14943 382 aa16.3■□□□□ 0.2
CACNA1B-201ENST00000277549 TPSG1Q9NRR2 321 aa16.3■□□□□ 0.2
CACNA1B-201ENST00000277549 TSSC4Q9Y5U2 329 aaPredicted RBP16.3■□□□□ 0.2
CACNA1B-201ENST00000277549 HIST1H2BKO60814 126 aa16.3■□□□□ 0.2
CACNA1B-201ENST00000277549 HIST1H2BJP06899 126 aa16.3■□□□□ 0.2
CACNA1B-201ENST00000277549 HIST1H2BOP23527 126 aa16.3■□□□□ 0.2
CACNA1B-201ENST00000277549 HIST1H2BBP33778 126 aa16.3■□□□□ 0.2
CACNA1B-201ENST00000277549 HIST1H2BDP58876 126 aa16.3■□□□□ 0.2
CACNA1B-201ENST00000277549 HIST1H2BCP62807 126 aa16.3■□□□□ 0.2
CACNA1B-201ENST00000277549 HIST2H2BEQ16778 126 aa16.3■□□□□ 0.2
CACNA1B-201ENST00000277549 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.3■□□□□ 0.2
CACNA1B-201ENST00000277549 HIST1H2BHQ93079 126 aa16.3■□□□□ 0.2
CACNA1B-201ENST00000277549 HIST1H2BNQ99877 126 aa16.3■□□□□ 0.2
CACNA1B-201ENST00000277549 HIST1H2BMQ99879 126 aa16.3■□□□□ 0.2
CACNA1B-201ENST00000277549 NDUFAF3Q9BU61 184 aa16.3■□□□□ 0.2
CACNA1B-201ENST00000277549 RBBP6Q7Z6E9 1792 aaKnown RBP16.29■□□□□ 0.2
CACNA1B-201ENST00000277549 SEC16AO15027 2179 aa16.29■□□□□ 0.2
CACNA1B-201ENST00000277549 IGHG4P01861 327 aa16.29■□□□□ 0.2
CACNA1B-201ENST00000277549 RNF5Q99942 180 aa16.29■□□□□ 0.2
CACNA1B-201ENST00000277549 DIAPH2-AS1Q14236 149 aa16.29■□□□□ 0.2
CACNA1B-201ENST00000277549 WFDC11Q8NEX6 87 aa16.28■□□□□ 0.2
CACNA1B-201ENST00000277549 SHANK2-AS3Q9BTD1 123 aa16.28■□□□□ 0.2
CACNA1B-201ENST00000277549 COL4A6Q14031 1691 aa16.28■□□□□ 0.2
CACNA1B-201ENST00000277549 CDKN1BP46527 198 aa16.28■□□□□ 0.2
CACNA1B-201ENST00000277549 ID3Q02535 119 aa16.28■□□□□ 0.2
CACNA1B-201ENST00000277549 THSD7AQ9UPZ6 1657 aa16.28■□□□□ 0.2
CACNA1B-201ENST00000277549 DOCK6Q96HP0 2047 aa16.28■□□□□ 0.2
CACNA1B-201ENST00000277549 LYPD3O95274 346 aa16.27■□□□□ 0.2
CACNA1B-201ENST00000277549 LRRC37AA6NMS7 1700 aa16.27■□□□□ 0.2
CACNA1B-201ENST00000277549 LY6G6FQ5SQ64 297 aa16.27■□□□□ 0.19
CACNA1B-201ENST00000277549 BAALCQ8WXS3 180 aa16.27■□□□□ 0.19
CACNA1B-201ENST00000277549 U3KQE9 123 aa16.26■□□□□ 0.19
CACNA1B-201ENST00000277549 SCN5AQ14524 2016 aa16.26■□□□□ 0.19
CACNA1B-201ENST00000277549 MPV17L2Q567V2 206 aa16.26■□□□□ 0.19
CACNA1B-201ENST00000277549 C4orf48Q5BLP8 95 aa16.26■□□□□ 0.19
CACNA1B-201ENST00000277549 UBE2AP49459 152 aa16.25■□□□□ 0.19
CACNA1B-201ENST00000277549 PI4KAP42356 2102 aa16.25■□□□□ 0.19
CACNA1B-201ENST00000277549 C9orf153Q5TBE3 101 aa16.25■□□□□ 0.19
CACNA1B-201ENST00000277549 IGLL5B9A064 214 aa16.25■□□□□ 0.19
CACNA1B-201ENST00000277549 GP9P14770 177 aa16.25■□□□□ 0.19
CACNA1B-201ENST00000277549 A0A0G2JRQ6 117 aa16.25■□□□□ 0.19
CACNA1B-201ENST00000277549 C1orf43Q9BWL3 253 aa16.25■□□□□ 0.19
CACNA1B-201ENST00000277549 PNRC2Q9NPJ4 139 aaKnown RBP16.24■□□□□ 0.19
CACNA1B-201ENST00000277549 AMBPP02760 352 aa16.24■□□□□ 0.19
CACNA1B-201ENST00000277549 ZFP36P26651 326 aaKnown RBP16.24■□□□□ 0.19
CACNA1B-201ENST00000277549 BTCP35070 178 aa16.24■□□□□ 0.19
CACNA1B-201ENST00000277549 NPBQ8NG41 125 aa16.24■□□□□ 0.19
CACNA1B-201ENST00000277549 DOCK4Q8N1I0 1966 aa16.24■□□□□ 0.19
CACNA1B-201ENST00000277549 WDR86Q86TI4 376 aa16.24■□□□□ 0.19
CACNA1B-201ENST00000277549 SDHAF1A6NFY7 115 aa16.24■□□□□ 0.19
CACNA1B-201ENST00000277549 ADAMTSL5Q6ZMM2 481 aa16.24■□□□□ 0.19
CACNA1B-201ENST00000277549 CCL18P55774 89 aa16.24■□□□□ 0.19
CACNA1B-201ENST00000277549 IGHV1-24A0A0C4DH33 117 aa16.23■□□□□ 0.19
CACNA1B-201ENST00000277549 C5orf38Q86SI9 138 aa16.23■□□□□ 0.19
CACNA1B-201ENST00000277549 GNRH2O43555 120 aa16.23■□□□□ 0.19
CACNA1B-201ENST00000277549 PFN1P07737 140 aaKnown RBP16.23■□□□□ 0.19
CACNA1B-201ENST00000277549 B3GALT5-AS1P59052 145 aa16.23■□□□□ 0.19
CACNA1B-201ENST00000277549 INTS1Q8N201 2190 aaKnown RBP16.23■□□□□ 0.19
CACNA1B-201ENST00000277549 C15orf62A8K5M9 175 aa16.23■□□□□ 0.19
CACNA1B-201ENST00000277549 NBL1P41271 181 aa16.23■□□□□ 0.19
CACNA1B-201ENST00000277549 AHCTF1Q8WYP5 2266 aa16.23■□□□□ 0.19
CACNA1B-201ENST00000277549 FANCD2OSQ96PS1 177 aa16.23■□□□□ 0.19
CACNA1B-201ENST00000277549 HLA-DMBP28068 263 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms