RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 TTC32Q5I0X7 151 aa8.6□□□□□ -1.03
TRAF4-202ENST00000262396 STX12Q86Y82 276 aa8.6□□□□□ -1.03
TRAF4-202ENST00000262396 MGST2Q99735 147 aa8.6□□□□□ -1.03
TRAF4-202ENST00000262396 PARD6GQ9BYG4 376 aaPredicted RBP8.6□□□□□ -1.03
TRAF4-202ENST00000262396 TIMM9Q9Y5J7 89 aa8.6□□□□□ -1.03
TRAF4-202ENST00000262396 KIAA1109Q2LD37 5005 aa8.6□□□□□ -1.03
TRAF4-202ENST00000262396 TRGV2A0A075B6R0 118 aa8.59□□□□□ -1.03
TRAF4-202ENST00000262396 TRAV6A0A075B6T7 132 aa8.59□□□□□ -1.03
TRAF4-202ENST00000262396 TRAV26-1A0A087WT03 109 aa8.59□□□□□ -1.03
TRAF4-202ENST00000262396 TRAV12-3A0A0B4J271 114 aa8.59□□□□□ -1.03
TRAF4-202ENST00000262396 UBE2L5PA0A1B0GUS4 154 aa8.59□□□□□ -1.03
TRAF4-202ENST00000262396 HBG1P69891 147 aa8.59□□□□□ -1.03
TRAF4-202ENST00000262396 HBG2P69892 147 aa8.59□□□□□ -1.03
TRAF4-202ENST00000262396 ARL16Q0P5N6 197 aa8.59□□□□□ -1.03
TRAF4-202ENST00000262396 GFI1BQ5VTD9 330 aa8.59□□□□□ -1.03
TRAF4-202ENST00000262396 MIC13Q5XKP0 118 aa8.59□□□□□ -1.03
TRAF4-202ENST00000262396 ZNRF2Q8NHG8 242 aa8.59□□□□□ -1.03
TRAF4-202ENST00000262396 LINC00588Q9Y4M8 146 aa8.59□□□□□ -1.03
TRAF4-202ENST00000262396 PLAC8L1A1L4L8 177 aa8.58□□□□□ -1.04
TRAF4-202ENST00000262396 FAM24AA6NFZ4 105 aa8.58□□□□□ -1.04
TRAF4-202ENST00000262396 LYRM1O43325 122 aa8.58□□□□□ -1.04
TRAF4-202ENST00000262396 S100A11P31949 105 aa8.58□□□□□ -1.04
TRAF4-202ENST00000262396 TNP2Q05952 138 aa8.58□□□□□ -1.04
TRAF4-202ENST00000262396 RNASE8Q8TDE3 154 aaKnown RBP8.58□□□□□ -1.04
TRAF4-202ENST00000262396 ZNF431Q8TF32 576 aaPredicted RBP8.58□□□□□ -1.04
TRAF4-202ENST00000262396 TMEM37Q8WXS4 190 aa8.58□□□□□ -1.04
TRAF4-202ENST00000262396 AAMDCQ9H7C9 122 aa8.58□□□□□ -1.04
TRAF4-202ENST00000262396 Q9H8V8 135 aa8.58□□□□□ -1.04
TRAF4-202ENST00000262396 TRAV5A0A0B4J249 113 aa8.57□□□□□ -1.04
TRAF4-202ENST00000262396 PRAC2D3DTV9 90 aa8.57□□□□□ -1.04
TRAF4-202ENST00000262396 SLC17A3O00476 420 aa8.57□□□□□ -1.04
TRAF4-202ENST00000262396 MRPS12O15235 138 aaKnown RBP8.57□□□□□ -1.04
TRAF4-202ENST00000262396 TCRBP04435 133 aa8.57□□□□□ -1.04
TRAF4-202ENST00000262396 FGF7P21781 194 aa8.57□□□□□ -1.04
TRAF4-202ENST00000262396 RXFP4Q8TDU9 374 aa8.57□□□□□ -1.04
TRAF4-202ENST00000262396 BLNKQ8WV28 456 aa8.57□□□□□ -1.04
TRAF4-202ENST00000262396 C2orf50Q96LR7 162 aa8.57□□□□□ -1.04
TRAF4-202ENST00000262396 SEC22CQ9BRL7 303 aa8.57□□□□□ -1.04
TRAF4-202ENST00000262396 PYGO2Q9BRQ0 406 aa8.57□□□□□ -1.04
TRAF4-202ENST00000262396 GPN1Q9HCN4 374 aaPredicted RBP8.57□□□□□ -1.04
TRAF4-202ENST00000262396 NUDT15Q9NV35 164 aa8.57□□□□□ -1.04
TRAF4-202ENST00000262396 DNAH2Q9P225 4427 aa8.57□□□□□ -1.04
TRAF4-202ENST00000262396 H3BQ15 152 aa8.56□□□□□ -1.04
TRAF4-202ENST00000262396 SLC25A5P05141 298 aaKnown RBP8.56□□□□□ -1.04
TRAF4-202ENST00000262396 H2AFB2P0C5Z0 115 aa8.56□□□□□ -1.04
TRAF4-202ENST00000262396 IGLC2P0DOY2 106 aa8.56□□□□□ -1.04
TRAF4-202ENST00000262396 HIST1H1EP10412 219 aaKnown RBP8.56□□□□□ -1.04
TRAF4-202ENST00000262396 BTCP35070 178 aa8.56□□□□□ -1.04
TRAF4-202ENST00000262396 SULT1A1P50225 295 aa8.56□□□□□ -1.04
TRAF4-202ENST00000262396 KIR3DS1Q14943 382 aa8.56□□□□□ -1.04
TRAF4-202ENST00000262396 ATP6V1FQ16864 119 aa8.56□□□□□ -1.04
TRAF4-202ENST00000262396 ZNF680Q8NEM1 530 aa8.56□□□□□ -1.04
TRAF4-202ENST00000262396 BATF3Q9NR55 127 aa8.56□□□□□ -1.04
TRAF4-202ENST00000262396 SLC39A9Q9NUM3 307 aa8.56□□□□□ -1.04
TRAF4-202ENST00000262396 PRELID1Q9Y255 219 aa8.56□□□□□ -1.04
TRAF4-202ENST00000262396 FAT2Q9NYQ8 4349 aa8.56□□□□□ -1.04
TRAF4-202ENST00000262396 PCLOQ9Y6V0 5065 aa8.55□□□□□ -1.04
TRAF4-202ENST00000262396 TRGV1A0A0A0MS02 117 aa8.55□□□□□ -1.04
TRAF4-202ENST00000262396 FAM240BA0A1B0GVZ2 78 aa8.55□□□□□ -1.04
TRAF4-202ENST00000262396 NPIPB6E9PJ23 425 aa8.55□□□□□ -1.04
TRAF4-202ENST00000262396 RGS13O14921 159 aa8.55□□□□□ -1.04
TRAF4-202ENST00000262396 GPX1P07203 203 aa8.55□□□□□ -1.04
TRAF4-202ENST00000262396 CT45A10P0DMU9 189 aa8.55□□□□□ -1.04
TRAF4-202ENST00000262396 RNASE4P34096 147 aaKnown RBP8.55□□□□□ -1.04
TRAF4-202ENST00000262396 RPL29P47914 159 aaKnown RBP8.55□□□□□ -1.04
TRAF4-202ENST00000262396 TMEM78Q5T7P6 136 aa8.55□□□□□ -1.04
TRAF4-202ENST00000262396 MORN5Q5VZ52 161 aa8.55□□□□□ -1.04
TRAF4-202ENST00000262396 ODF3Q96PU9 254 aa8.55□□□□□ -1.04
TRAF4-202ENST00000262396 ARPC5LQ9BPX5 153 aa8.55□□□□□ -1.04
TRAF4-202ENST00000262396 WDR83OSQ9Y284 106 aa8.55□□□□□ -1.04
TRAF4-202ENST00000262396 DNAH17Q9UFH2 4485 aa8.55□□□□□ -1.04
TRAF4-202ENST00000262396 C7orf71A4D174 169 aa8.54□□□□□ -1.04
TRAF4-202ENST00000262396 ERCC8Q13216 396 aa8.54□□□□□ -1.04
TRAF4-202ENST00000262396 MZT2BQ6NZ67 158 aa8.54□□□□□ -1.04
TRAF4-202ENST00000262396 MRPL53Q96EL3 112 aaKnown RBP8.54□□□□□ -1.04
TRAF4-202ENST00000262396 SAT2Q96F10 170 aaPredicted RBP8.54□□□□□ -1.04
TRAF4-202ENST00000262396 ZNF503Q96F45 646 aa8.54□□□□□ -1.04
TRAF4-202ENST00000262396 LINC00477Q96M19 166 aa8.54□□□□□ -1.04
TRAF4-202ENST00000262396 SDHCQ99643 169 aaPredicted RBP8.54□□□□□ -1.04
TRAF4-202ENST00000262396 TMPRSS5Q9H3S3 457 aa8.54□□□□□ -1.04
TRAF4-202ENST00000262396 LYRM2Q9NU23 88 aaPredicted RBP8.54□□□□□ -1.04
TRAF4-202ENST00000262396 ZNF586Q9NXT0 402 aa8.54□□□□□ -1.04
TRAF4-202ENST00000262396 TRBV19A0A075B6N1 114 aa8.53□□□□□ -1.04
TRAF4-202ENST00000262396 ZNF253O75346 499 aa8.53□□□□□ -1.04
TRAF4-202ENST00000262396 MPDU1O75352 247 aa8.53□□□□□ -1.04
TRAF4-202ENST00000262396 DAZ2Q13117 558 aaKnown RBP8.53□□□□□ -1.04
TRAF4-202ENST00000262396 RAB32Q13637 225 aa8.53□□□□□ -1.04
TRAF4-202ENST00000262396 Q6ZTI0 123 aa8.53□□□□□ -1.04
TRAF4-202ENST00000262396 SPATA12Q7Z6I5 190 aa8.53□□□□□ -1.04
TRAF4-202ENST00000262396 EIF4E3Q8N5X7 224 aaKnown RBP8.53□□□□□ -1.04
TRAF4-202ENST00000262396 TMEM252Q8N6L7 170 aa8.53□□□□□ -1.04
TRAF4-202ENST00000262396 SLC25A31Q9H0C2 315 aa8.53□□□□□ -1.04
TRAF4-202ENST00000262396 GSN-AS1Q9NRJ2 163 aa8.53□□□□□ -1.04
TRAF4-202ENST00000262396 PKHD1P08F94 4074 aa8.52□□□□□ -1.05
TRAF4-202ENST00000262396 H3BNG1 76 aa8.52□□□□□ -1.05
TRAF4-202ENST00000262396 M0R3E3 92 aa8.52□□□□□ -1.05
TRAF4-202ENST00000262396 EREGO14944 169 aa8.52□□□□□ -1.05
TRAF4-202ENST00000262396 PLA2G10O15496 165 aa8.52□□□□□ -1.05
TRAF4-202ENST00000262396 PYYP10082 97 aa8.52□□□□□ -1.05
TRAF4-202ENST00000262396 HOXA5P20719 270 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 137.7 ms