RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 GUSBP1Q15486 140 aa11.06□□□□□ -0.64
CDH1-201ENST00000261769 A0A1B0GW64 132 aa11.05□□□□□ -0.64
CDH1-201ENST00000261769 PKIAP61925 76 aa11.05□□□□□ -0.64
CDH1-201ENST00000261769 SPINK13Q1W4C9 94 aa11.05□□□□□ -0.64
CDH1-201ENST00000261769 C8orf86Q6ZUL3 223 aa11.05□□□□□ -0.64
CDH1-201ENST00000261769 TMEM86BQ8N661 226 aa11.05□□□□□ -0.64
CDH1-201ENST00000261769 TRAV8-1A0A0A6YYK1 113 aa11.05□□□□□ -0.64
CDH1-201ENST00000261769 TRAV8-6A0A0B4J262 113 aa11.05□□□□□ -0.64
CDH1-201ENST00000261769 HBDP02042 147 aa11.05□□□□□ -0.64
CDH1-201ENST00000261769 LINC00469Q8N7U9 141 aa11.05□□□□□ -0.64
CDH1-201ENST00000261769 C19orf84I3L1E1 186 aa11.05□□□□□ -0.64
CDH1-201ENST00000261769 LBHQ53QV2 105 aaPredicted RBP11.05□□□□□ -0.64
CDH1-201ENST00000261769 DNLZQ5SXM8 178 aa11.05□□□□□ -0.64
CDH1-201ENST00000261769 LYZL1Q6UWQ5 148 aa11.05□□□□□ -0.64
CDH1-201ENST00000261769 SSBP4Q9BWG4 385 aaPredicted RBP11.05□□□□□ -0.64
CDH1-201ENST00000261769 LIME1Q9H400 295 aa11.05□□□□□ -0.64
CDH1-201ENST00000261769 FREM1Q5H8C1 2179 aa11.04□□□□□ -0.64
CDH1-201ENST00000261769 F5H768 121 aa11.04□□□□□ -0.64
CDH1-201ENST00000261769 RPLP1P05386 114 aaKnown RBP11.04□□□□□ -0.64
CDH1-201ENST00000261769 CDX1P47902 265 aaPredicted RBP11.04□□□□□ -0.64
CDH1-201ENST00000261769 NPBQ8NG41 125 aa11.04□□□□□ -0.64
CDH1-201ENST00000261769 FGF23Q9GZV9 251 aaPredicted RBP11.04□□□□□ -0.64
CDH1-201ENST00000261769 UQCR10Q9UDW1 63 aa11.04□□□□□ -0.64
CDH1-201ENST00000261769 TRBV19A0A075B6N1 114 aa11.04□□□□□ -0.64
CDH1-201ENST00000261769 VCYO14598 125 aa11.04□□□□□ -0.64
CDH1-201ENST00000261769 IGLC1P0CG04 106 aa11.04□□□□□ -0.64
CDH1-201ENST00000261769 SMIM12Q96EX1 92 aa11.04□□□□□ -0.64
CDH1-201ENST00000261769 GNB1LQ9BYB4 327 aa11.04□□□□□ -0.64
CDH1-201ENST00000261769 SMPXQ9UHP9 88 aa11.04□□□□□ -0.64
CDH1-201ENST00000261769 IGHV3-73A0A0B4J1V6 119 aa11.04□□□□□ -0.64
CDH1-201ENST00000261769 PRB4P10163 310 aaPredicted RBP11.04□□□□□ -0.64
CDH1-201ENST00000261769 LINC00518Q8N0U6 118 aa11.04□□□□□ -0.64
CDH1-201ENST00000261769 OR5A1Q8NGJ0 315 aa11.04□□□□□ -0.64
CDH1-201ENST00000261769 ATP6V0BQ99437 205 aa11.04□□□□□ -0.64
CDH1-201ENST00000261769 CDKN1BP46527 198 aa11.04□□□□□ -0.64
CDH1-201ENST00000261769 C10orf142B7Z368 130 aa11.03□□□□□ -0.64
CDH1-201ENST00000261769 SEC11AP67812 179 aa11.03□□□□□ -0.64
CDH1-201ENST00000261769 Q86TA4 180 aa11.03□□□□□ -0.64
CDH1-201ENST00000261769 CLPSL1A2RUU4 121 aa11.03□□□□□ -0.64
CDH1-201ENST00000261769 BLCAPP62952 87 aa11.03□□□□□ -0.64
CDH1-201ENST00000261769 LINC01559Q495D7 138 aa11.03□□□□□ -0.64
CDH1-201ENST00000261769 LOC107984156A0A0G2JMH3 177 aa11.03□□□□□ -0.64
CDH1-201ENST00000261769 GZMBP10144 247 aa11.03□□□□□ -0.64
CDH1-201ENST00000261769 LINC01551Q86U37 167 aa11.03□□□□□ -0.64
CDH1-201ENST00000261769 ARL17AQ8IVW1 177 aa11.03□□□□□ -0.64
CDH1-201ENST00000261769 TMEM14CQ9P0S9 112 aa11.03□□□□□ -0.64
CDH1-201ENST00000261769 NAV3Q8IVL0 2385 aa11.03□□□□□ -0.64
CDH1-201ENST00000261769 ZFP36P26651 326 aaKnown RBP11.02□□□□□ -0.64
CDH1-201ENST00000261769 ERCC8Q13216 396 aa11.02□□□□□ -0.64
CDH1-201ENST00000261769 ST6GALNAC6Q969X2 333 aa11.02□□□□□ -0.64
CDH1-201ENST00000261769 H3BRN7 92 aa11.02□□□□□ -0.65
CDH1-201ENST00000261769 RASL11AQ6T310 242 aa11.02□□□□□ -0.65
CDH1-201ENST00000261769 IGHV7-81A0A0B4J1V7 117 aa11.02□□□□□ -0.65
CDH1-201ENST00000261769 IGLC7A0M8Q6 106 aa11.02□□□□□ -0.65
CDH1-201ENST00000261769 DNAL4O96015 105 aa11.02□□□□□ -0.65
CDH1-201ENST00000261769 ZNF25P17030 456 aaPredicted RBP11.02□□□□□ -0.65
CDH1-201ENST00000261769 PCDH15Q96QU1 1955 aa11.02□□□□□ -0.65
CDH1-201ENST00000261769 IGHV1OR15-1A0A075B7D0 117 aa11.02□□□□□ -0.65
CDH1-201ENST00000261769 LINC00614P0C842 121 aa11.02□□□□□ -0.65
CDH1-201ENST00000261769 EVI2AP22794 236 aa11.02□□□□□ -0.65
CDH1-201ENST00000261769 RNF182Q8N6D2 247 aa11.02□□□□□ -0.65
CDH1-201ENST00000261769 THAP8Q8NA92 274 aa11.02□□□□□ -0.65
CDH1-201ENST00000261769 TMEM242Q9NWH2 141 aa11.02□□□□□ -0.65
CDH1-201ENST00000261769 PIEZO2Q9H5I5 2752 aa11.02□□□□□ -0.65
CDH1-201ENST00000261769 HIVEP3Q5T1R4 2406 aa11.01□□□□□ -0.65
CDH1-201ENST00000261769 ARMS2P0C7Q2 107 aa11.01□□□□□ -0.65
CDH1-201ENST00000261769 C14orf178Q8N769 122 aaPredicted RBP11.01□□□□□ -0.65
CDH1-201ENST00000261769 TMEM75Q8N9X5 138 aa11.01□□□□□ -0.65
CDH1-201ENST00000261769 SPAG8Q99932 426 aaPredicted RBP11.01□□□□□ -0.65
CDH1-201ENST00000261769 CHD8Q9HCK8 2581 aa11.01□□□□□ -0.65
CDH1-201ENST00000261769 TMEM95Q3KNT9 176 aa11.01□□□□□ -0.65
CDH1-201ENST00000261769 TMEM89A2RUT3 159 aa11□□□□□ -0.65
CDH1-201ENST00000261769 PFN1P07737 140 aaKnown RBP11□□□□□ -0.65
CDH1-201ENST00000261769 CIDEAO60543 219 aa11□□□□□ -0.65
CDH1-201ENST00000261769 GHRHP01286 108 aa11□□□□□ -0.65
CDH1-201ENST00000261769 PAX9P55771 341 aa11□□□□□ -0.65
CDH1-201ENST00000261769 TMEM131Q92545 1883 aa11□□□□□ -0.65
CDH1-201ENST00000261769 A8MWV9 139 aa11□□□□□ -0.65
CDH1-201ENST00000261769 SIRPDQ9H106 197 aa11□□□□□ -0.65
CDH1-201ENST00000261769 LAGE3Q14657 143 aa11□□□□□ -0.65
CDH1-201ENST00000261769 IGLV1-47P01700 117 aa10.99□□□□□ -0.65
CDH1-201ENST00000261769 MYCNOSP40205 109 aa10.99□□□□□ -0.65
CDH1-201ENST00000261769 LMO4P61968 165 aa10.99□□□□□ -0.65
CDH1-201ENST00000261769 TMEM170AQ8WVE7 144 aa10.99□□□□□ -0.65
CDH1-201ENST00000261769 DERL1Q9BUN8 251 aa10.99□□□□□ -0.65
CDH1-201ENST00000261769 MS4A6AQ9H2W1 248 aa10.99□□□□□ -0.65
CDH1-201ENST00000261769 IGKV3D-20A0A0C4DH25 116 aa10.99□□□□□ -0.65
CDH1-201ENST00000261769 RPL24P83731 157 aaKnown RBP10.99□□□□□ -0.65
CDH1-201ENST00000261769 MSMPQ1L6U9 139 aa10.99□□□□□ -0.65
CDH1-201ENST00000261769 FOXI2Q6ZQN5 318 aa10.99□□□□□ -0.65
CDH1-201ENST00000261769 KNCNA6PVL3 124 aa10.99□□□□□ -0.65
CDH1-201ENST00000261769 CKS1BP61024 79 aa10.99□□□□□ -0.65
CDH1-201ENST00000261769 SLAQ13239 276 aa10.99□□□□□ -0.65
CDH1-201ENST00000261769 C5orf56Q8N8D9 126 aa10.99□□□□□ -0.65
CDH1-201ENST00000261769 CHCHD1Q96BP2 118 aaKnown RBP10.99□□□□□ -0.65
CDH1-201ENST00000261769 RBMY1BA6NDE4 496 aaKnown RBP10.98□□□□□ -0.65
CDH1-201ENST00000261769 RBMY1EA6NEQ0 496 aaKnown RBP10.98□□□□□ -0.65
CDH1-201ENST00000261769 NDUFA3O95167 84 aa10.98□□□□□ -0.65
CDH1-201ENST00000261769 RBMY1DP0C7P1 496 aaKnown RBP10.98□□□□□ -0.65
CDH1-201ENST00000261769 RBMY1A1P0DJD3 496 aaKnown RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms