RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 A0A1W2PRE2 83 aa14.93□□□□□ -0.02
SNRPA-201ENST00000243563 KNCNA6PVL3 124 aa14.93□□□□□ -0.02
SNRPA-201ENST00000243563 SNRPD3P62318 126 aaKnown RBP14.93□□□□□ -0.02
SNRPA-201ENST00000243563 SUMO1P63165 101 aaKnown RBP14.93□□□□□ -0.02
SNRPA-201ENST00000243563 ZNF738Q8NE65 137 aa14.93□□□□□ -0.02
SNRPA-201ENST00000243563 RARRES2Q99969 163 aa14.93□□□□□ -0.02
SNRPA-201ENST00000243563 CLLU1Q5K131 121 aa14.92□□□□□ -0.02
SNRPA-201ENST00000243563 CCDC28AQ8IWP9 274 aa14.92□□□□□ -0.02
SNRPA-201ENST00000243563 DEFB125Q8N687 156 aa14.92□□□□□ -0.02
SNRPA-201ENST00000243563 OR11H12B2RN74 326 aa14.92□□□□□ -0.02
SNRPA-201ENST00000243563 CST9LP1Q5W188 147 aa14.92□□□□□ -0.02
SNRPA-201ENST00000243563 LYPD1Q8N2G4 141 aa14.92□□□□□ -0.02
SNRPA-201ENST00000243563 RPUSD4Q96CM3 377 aaKnown RBP14.92□□□□□ -0.02
SNRPA-201ENST00000243563 AAMDCQ9H7C9 122 aa14.92□□□□□ -0.02
SNRPA-201ENST00000243563 RPH3ALQ9UNE2 315 aa14.92□□□□□ -0.02
SNRPA-201ENST00000243563 SAMD13Q5VXD3 122 aa14.91□□□□□ -0.02
SNRPA-201ENST00000243563 GTSCR1Q86UQ5 136 aa14.91□□□□□ -0.02
SNRPA-201ENST00000243563 IGKV2-40A0A087WW87 121 aaPredicted RBP14.9□□□□□ -0.02
SNRPA-201ENST00000243563 LOC102723971A0A1B0GUV8 181 aa14.9□□□□□ -0.02
SNRPA-201ENST00000243563 IGKV2D-40P01614 121 aaPredicted RBP14.9□□□□□ -0.02
SNRPA-201ENST00000243563 SLC25A5P05141 298 aaKnown RBP14.9□□□□□ -0.02
SNRPA-201ENST00000243563 BCL2P10415 239 aa14.9□□□□□ -0.02
SNRPA-201ENST00000243563 PMS2P11Q13670 270 aa14.9□□□□□ -0.02
SNRPA-201ENST00000243563 MANBALQ9NQG1 85 aa14.9□□□□□ -0.02
SNRPA-201ENST00000243563 AURKAIP1Q9NWT8 199 aaPredicted RBP14.89□□□□□ -0.03
SNRPA-201ENST00000243563 RAB14P61106 215 aa14.88□□□□□ -0.03
SNRPA-201ENST00000243563 SRSF3P84103 164 aaKnown RBP14.88□□□□□ -0.03
SNRPA-201ENST00000243563 ERCC8Q13216 396 aa14.88□□□□□ -0.03
SNRPA-201ENST00000243563 TOR2AQ5JU69 321 aa14.88□□□□□ -0.03
SNRPA-201ENST00000243563 ACTL10Q5JWF8 245 aa14.88□□□□□ -0.03
SNRPA-201ENST00000243563 MRPL53Q96EL3 112 aaKnown RBP14.88□□□□□ -0.03
SNRPA-201ENST00000243563 ASCL2Q99929 193 aa14.88□□□□□ -0.03
SNRPA-201ENST00000243563 FAM110AQ9BQ89 295 aa14.88□□□□□ -0.03
SNRPA-201ENST00000243563 SAV1Q9H4B6 383 aaPredicted RBP14.88□□□□□ -0.03
SNRPA-201ENST00000243563 ARL2-SNX15V9GYD0 113 aa14.88□□□□□ -0.03
SNRPA-201ENST00000243563 A0A0J9YX75 114 aa14.88□□□□□ -0.03
SNRPA-201ENST00000243563 RBMY1BA6NDE4 496 aaKnown RBP14.88□□□□□ -0.03
SNRPA-201ENST00000243563 RBMY1EA6NEQ0 496 aaKnown RBP14.88□□□□□ -0.03
SNRPA-201ENST00000243563 DIRC3C9JPN6 131 aa14.88□□□□□ -0.03
SNRPA-201ENST00000243563 C11orf94C9JXX5 98 aa14.88□□□□□ -0.03
SNRPA-201ENST00000243563 RBMY1DP0C7P1 496 aaKnown RBP14.88□□□□□ -0.03
SNRPA-201ENST00000243563 PPT1P50897 306 aa14.88□□□□□ -0.03
SNRPA-201ENST00000243563 C5orf17Q8NAS9 161 aa14.88□□□□□ -0.03
SNRPA-201ENST00000243563 FAM210AQ96ND0 272 aa14.88□□□□□ -0.03
SNRPA-201ENST00000243563 VGLL1Q99990 258 aa14.88□□□□□ -0.03
SNRPA-201ENST00000243563 EPDR1Q9UM22 224 aa14.88□□□□□ -0.03
SNRPA-201ENST00000243563 PRELID1Q9Y255 219 aa14.88□□□□□ -0.03
SNRPA-201ENST00000243563 SCO2A0A1W2PP80 73 aa14.87□□□□□ -0.03
SNRPA-201ENST00000243563 RBFOX3A6NFN3 312 aa14.87□□□□□ -0.03
SNRPA-201ENST00000243563 GOLT1AQ6ZVE7 132 aa14.87□□□□□ -0.03
SNRPA-201ENST00000243563 OR8A1Q8NGG7 326 aa14.87□□□□□ -0.03
SNRPA-201ENST00000243563 RXFP4Q8TDU9 374 aa14.87□□□□□ -0.03
SNRPA-201ENST00000243563 SGK494Q96LW2 274 aa14.87□□□□□ -0.03
SNRPA-201ENST00000243563 LINC00479Q96M42 142 aa14.87□□□□□ -0.03
SNRPA-201ENST00000243563 TRAV8-1A0A0A6YYK1 113 aa14.86□□□□□ -0.03
SNRPA-201ENST00000243563 IGKV3-20P01619 116 aa14.86□□□□□ -0.03
SNRPA-201ENST00000243563 TCRAP04437 139 aa14.86□□□□□ -0.03
SNRPA-201ENST00000243563 HIST1H1AQ02539 215 aaPredicted RBP14.86□□□□□ -0.03
SNRPA-201ENST00000243563 ZNF506Q5JVG8 444 aa14.86□□□□□ -0.03
SNRPA-201ENST00000243563 FOXI2Q6ZQN5 318 aa14.86□□□□□ -0.03
SNRPA-201ENST00000243563 CLEC5AQ9NY25 188 aa14.86□□□□□ -0.03
SNRPA-201ENST00000243563 K7EIL1 84 aa14.85□□□□□ -0.03
SNRPA-201ENST00000243563 IFNA1P01562 189 aa14.85□□□□□ -0.03
SNRPA-201ENST00000243563 MEF2BQ02080 365 aaPredicted RBP14.85□□□□□ -0.03
SNRPA-201ENST00000243563 CMTM2Q8TAZ6 248 aa14.85□□□□□ -0.03
SNRPA-201ENST00000243563 SRD5A3Q9H8P0 318 aa14.85□□□□□ -0.03
SNRPA-201ENST00000243563 VAX2Q9UIW0 290 aa14.85□□□□□ -0.03
SNRPA-201ENST00000243563 C9JQL5 133 aa14.84□□□□□ -0.03
SNRPA-201ENST00000243563 H3BMM0 161 aa14.84□□□□□ -0.03
SNRPA-201ENST00000243563 HLA-DRB4P13762 266 aa14.84□□□□□ -0.03
SNRPA-201ENST00000243563 CNN1P51911 297 aaKnown RBP14.84□□□□□ -0.03
SNRPA-201ENST00000243563 HLA-DRB4X5D2U9 266 aa14.84□□□□□ -0.03
SNRPA-201ENST00000243563 TRAV34A0A0B4J273 112 aa14.84□□□□□ -0.03
SNRPA-201ENST00000243563 PEX7O00628 323 aa14.84□□□□□ -0.03
SNRPA-201ENST00000243563 IGHV4-30-4P0DP06 118 aa14.84□□□□□ -0.03
SNRPA-201ENST00000243563 Q8TAT8 98 aa14.84□□□□□ -0.03
SNRPA-201ENST00000243563 AGPAT4-IT1Q9H0P7 198 aa14.84□□□□□ -0.03
SNRPA-201ENST00000243563 NPIPB6E9PJ23 425 aa14.83□□□□□ -0.04
SNRPA-201ENST00000243563 IGLV2-11P01706 119 aa14.83□□□□□ -0.04
SNRPA-201ENST00000243563 CSN1S1P47710 185 aa14.83□□□□□ -0.04
SNRPA-201ENST00000243563 CMC4P56277 68 aaPredicted RBP14.83□□□□□ -0.04
SNRPA-201ENST00000243563 TRPT1Q86TN4 253 aaKnown RBP14.83□□□□□ -0.04
SNRPA-201ENST00000243563 DERL1Q9BUN8 251 aa14.83□□□□□ -0.04
SNRPA-201ENST00000243563 NKX6-2Q9C056 277 aaPredicted RBP14.83□□□□□ -0.04
SNRPA-201ENST00000243563 EIF5A2Q9GZV4 153 aaKnown RBP14.83□□□□□ -0.04
SNRPA-201ENST00000243563 ZMAT5Q9UDW3 170 aaKnown RBP14.83□□□□□ -0.04
SNRPA-201ENST00000243563 RPL35AP18077 110 aaKnown RBP14.82□□□□□ -0.04
SNRPA-201ENST00000243563 EBLN2Q6P2I7 272 aa14.82□□□□□ -0.04
SNRPA-201ENST00000243563 AMTNQ6UX39 209 aa14.82□□□□□ -0.04
SNRPA-201ENST00000243563 OR4B1Q8NGF8 309 aa14.82□□□□□ -0.04
SNRPA-201ENST00000243563 C2CD4CQ8TF44 421 aa14.82□□□□□ -0.04
SNRPA-201ENST00000243563 ATG101Q9BSB4 218 aa14.82□□□□□ -0.04
SNRPA-201ENST00000243563 A8MTW9 85 aa14.81□□□□□ -0.04
SNRPA-201ENST00000243563 CT45A10P0DMU9 189 aa14.81□□□□□ -0.04
SNRPA-201ENST00000243563 FXYD7P58549 80 aa14.81□□□□□ -0.04
SNRPA-201ENST00000243563 C9orf47Q6ZRZ4 202 aa14.81□□□□□ -0.04
SNRPA-201ENST00000243563 CYB561D1Q8N8Q1 229 aa14.81□□□□□ -0.04
SNRPA-201ENST00000243563 OR10J6PQ8NGY7 276 aa14.81□□□□□ -0.04
SNRPA-201ENST00000243563 C11orf52Q96A22 123 aa14.81□□□□□ -0.04
SNRPA-201ENST00000243563 SLC35B3Q9H1N7 401 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms