RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 M0R1W7 72 aa11.43□□□□□ -0.58
CNOT3-201ENST00000221232 DLEU1O43261 78 aa11.43□□□□□ -0.58
CNOT3-201ENST00000221232 ZNF207O43670 478 aaKnown RBP11.43□□□□□ -0.58
CNOT3-201ENST00000221232 HOXB4P17483 251 aaPredicted RBP11.43□□□□□ -0.58
CNOT3-201ENST00000221232 GPR183P32249 361 aa11.43□□□□□ -0.58
CNOT3-201ENST00000221232 TMEM75Q8N9X5 138 aa11.43□□□□□ -0.58
CNOT3-201ENST00000221232 HAX1O00165 279 aa11.42□□□□□ -0.58
CNOT3-201ENST00000221232 TSPOP30536 169 aa11.42□□□□□ -0.58
CNOT3-201ENST00000221232 CSN1S1P47710 185 aa11.42□□□□□ -0.58
CNOT3-201ENST00000221232 LYZL1Q6UWQ5 148 aa11.42□□□□□ -0.58
CNOT3-201ENST00000221232 VGLL1Q99990 258 aa11.42□□□□□ -0.58
CNOT3-201ENST00000221232 LINC00527Q9UJ94 153 aa11.42□□□□□ -0.58
CNOT3-201ENST00000221232 ZFP30Q9Y2G7 519 aa11.42□□□□□ -0.58
CNOT3-201ENST00000221232 IGHV7-81A0A0B4J1V7 117 aa11.42□□□□□ -0.58
CNOT3-201ENST00000221232 OVOL3O00110 214 aa11.42□□□□□ -0.58
CNOT3-201ENST00000221232 TCF21O43680 179 aa11.42□□□□□ -0.58
CNOT3-201ENST00000221232 CTSGP08311 255 aa11.42□□□□□ -0.58
CNOT3-201ENST00000221232 EGR2P11161 476 aaPredicted RBP11.42□□□□□ -0.58
CNOT3-201ENST00000221232 NEU4Q8WWR8 484 aaPredicted RBP11.42□□□□□ -0.58
CNOT3-201ENST00000221232 SRSF8Q9BRL6 282 aaKnown RBP11.42□□□□□ -0.58
CNOT3-201ENST00000221232 G3V318 75 aa11.42□□□□□ -0.58
CNOT3-201ENST00000221232 RIGQ13278 110 aa11.42□□□□□ -0.58
CNOT3-201ENST00000221232 COL5A1-AS1Q5SY13 56 aa11.42□□□□□ -0.58
CNOT3-201ENST00000221232 ERASQ7Z444 233 aa11.42□□□□□ -0.58
CNOT3-201ENST00000221232 PRSS3P2Q8NHM4 247 aa11.42□□□□□ -0.58
CNOT3-201ENST00000221232 COL25A1Q9BXS0 654 aaPredicted RBP11.42□□□□□ -0.58
CNOT3-201ENST00000221232 SPG11Q96JI7 2443 aa11.41□□□□□ -0.58
CNOT3-201ENST00000221232 SYS1-DBNDD2H3BUS1 97 aa11.41□□□□□ -0.58
CNOT3-201ENST00000221232 RBX1P62877 108 aa11.41□□□□□ -0.58
CNOT3-201ENST00000221232 ERCC8Q13216 396 aa11.41□□□□□ -0.58
CNOT3-201ENST00000221232 UNQ5815/PRO19632Q6UWF5 114 aa11.41□□□□□ -0.58
CNOT3-201ENST00000221232 SOX21Q9Y651 276 aaPredicted RBP11.41□□□□□ -0.58
CNOT3-201ENST00000221232 TMEM189A5PLL7 270 aa11.41□□□□□ -0.58
CNOT3-201ENST00000221232 SH2D1AO60880 128 aa11.41□□□□□ -0.58
CNOT3-201ENST00000221232 CLEC3BP05452 202 aa11.41□□□□□ -0.58
CNOT3-201ENST00000221232 AMN1Q8IY45 258 aa11.41□□□□□ -0.58
CNOT3-201ENST00000221232 TTC9CQ8N5M4 171 aa11.41□□□□□ -0.58
CNOT3-201ENST00000221232 RNF182Q8N6D2 247 aa11.41□□□□□ -0.58
CNOT3-201ENST00000221232 NDFIP1Q9BT67 221 aa11.41□□□□□ -0.58
CNOT3-201ENST00000221232 SMAD5-AS1Q9Y6J3 95 aa11.41□□□□□ -0.58
CNOT3-201ENST00000221232 TRAV30A0A087WSZ9 112 aa11.4□□□□□ -0.58
CNOT3-201ENST00000221232 SMKR1H3BMG3 65 aa11.4□□□□□ -0.58
CNOT3-201ENST00000221232 PPIFP30405 207 aaKnown RBP11.4□□□□□ -0.58
CNOT3-201ENST00000221232 C15orf32Q32M92 178 aa11.4□□□□□ -0.58
CNOT3-201ENST00000221232 CCDC144NLQ6NUI1 221 aa11.4□□□□□ -0.58
CNOT3-201ENST00000221232 RNF24Q9Y225 148 aa11.4□□□□□ -0.58
CNOT3-201ENST00000221232 SNAI2O43623 268 aa11.4□□□□□ -0.58
CNOT3-201ENST00000221232 ZNF80P51504 273 aaPredicted RBP11.4□□□□□ -0.58
CNOT3-201ENST00000221232 LOXL1Q08397 574 aaPredicted RBP11.4□□□□□ -0.58
CNOT3-201ENST00000221232 THYN1Q9P016 225 aa11.4□□□□□ -0.58
CNOT3-201ENST00000221232 IFI27P40305 119 aaPredicted RBP11.39□□□□□ -0.59
CNOT3-201ENST00000221232 TMEM219Q86XT9 240 aa11.39□□□□□ -0.59
CNOT3-201ENST00000221232 Q8N9W7 124 aa11.39□□□□□ -0.59
CNOT3-201ENST00000221232 D6R8Y8 96 aa11.39□□□□□ -0.59
CNOT3-201ENST00000221232 CHCHD1Q96BP2 118 aaKnown RBP11.39□□□□□ -0.59
CNOT3-201ENST00000221232 BPESC1Q9GZL8 116 aa11.39□□□□□ -0.59
CNOT3-201ENST00000221232 RABAC1Q9UI14 185 aa11.39□□□□□ -0.59
CNOT3-201ENST00000221232 FAM231BA6NCW3 169 aa11.38□□□□□ -0.59
CNOT3-201ENST00000221232 ATP6V0E1O15342 81 aa11.38□□□□□ -0.59
CNOT3-201ENST00000221232 SAPCD1Q5SSQ6 148 aa11.38□□□□□ -0.59
CNOT3-201ENST00000221232 CLEC19AQ6UXS0 136 aa11.38□□□□□ -0.59
CNOT3-201ENST00000221232 LYPD1Q8N2G4 141 aa11.38□□□□□ -0.59
CNOT3-201ENST00000221232 PRAC2D3DTV9 90 aa11.38□□□□□ -0.59
CNOT3-201ENST00000221232 ORM1P02763 201 aa11.38□□□□□ -0.59
CNOT3-201ENST00000221232 SAA4P35542 130 aa11.38□□□□□ -0.59
CNOT3-201ENST00000221232 UQCRFS1P47985 274 aa11.38□□□□□ -0.59
CNOT3-201ENST00000221232 RNF151Q2KHN1 245 aa11.38□□□□□ -0.59
CNOT3-201ENST00000221232 FA2HQ7L5A8 372 aa11.38□□□□□ -0.59
CNOT3-201ENST00000221232 WFDC3Q8IUB2 231 aa11.38□□□□□ -0.59
CNOT3-201ENST00000221232 MAP1LC3CQ9BXW4 147 aa11.38□□□□□ -0.59
CNOT3-201ENST00000221232 TMEM238LA0A1B0GVL6 79 aa11.38□□□□□ -0.59
CNOT3-201ENST00000221232 RHOGP84095 191 aa11.38□□□□□ -0.59
CNOT3-201ENST00000221232 AP5S1Q9NUS5 200 aa11.38□□□□□ -0.59
CNOT3-201ENST00000221232 MSRB1Q9NZV6 116 aa11.38□□□□□ -0.59
CNOT3-201ENST00000221232 SELENOKQ9Y6D0 94 aa11.38□□□□□ -0.59
CNOT3-201ENST00000221232 NCR2O95944 276 aa11.37□□□□□ -0.59
CNOT3-201ENST00000221232 OR5AL1P0C617 328 aa11.37□□□□□ -0.59
CNOT3-201ENST00000221232 RPL7P18124 248 aaKnown RBP11.37□□□□□ -0.59
CNOT3-201ENST00000221232 TWIST1Q15672 202 aa11.37□□□□□ -0.59
CNOT3-201ENST00000221232 OR8A1Q8NGG7 326 aa11.37□□□□□ -0.59
CNOT3-201ENST00000221232 FAM162BQ5T6X4 162 aa11.37□□□□□ -0.59
CNOT3-201ENST00000221232 Q8N6K4 173 aa11.37□□□□□ -0.59
CNOT3-201ENST00000221232 PRR25Q96S07 402 aa11.37□□□□□ -0.59
CNOT3-201ENST00000221232 SIRPDQ9H106 197 aa11.36□□□□□ -0.59
CNOT3-201ENST00000221232 C19orf84I3L1E1 186 aa11.36□□□□□ -0.59
CNOT3-201ENST00000221232 IGHG4P01861 327 aa11.36□□□□□ -0.59
CNOT3-201ENST00000221232 Q5PR19 223 aa11.36□□□□□ -0.59
CNOT3-201ENST00000221232 UCNP55089 124 aa11.35□□□□□ -0.59
CNOT3-201ENST00000221232 PSG9Q00887 426 aa11.35□□□□□ -0.59
CNOT3-201ENST00000221232 S100A7AQ86SG5 101 aa11.35□□□□□ -0.59
CNOT3-201ENST00000221232 PIP4P2Q8N4L2 257 aa11.35□□□□□ -0.59
CNOT3-201ENST00000221232 C20orf202A1L168 122 aa11.34□□□□□ -0.59
CNOT3-201ENST00000221232 MPV17L2Q567V2 206 aa11.34□□□□□ -0.59
CNOT3-201ENST00000221232 CLUHP3Q96NS8 147 aa11.34□□□□□ -0.59
CNOT3-201ENST00000221232 TMEM191AQ9H0A3 160 aa11.34□□□□□ -0.59
CNOT3-201ENST00000221232 TRBV6-1A0A0K0K1D8 114 aa11.34□□□□□ -0.59
CNOT3-201ENST00000221232 GAS8-AS1O95177 125 aa11.34□□□□□ -0.59
CNOT3-201ENST00000221232 FOXE3Q13461 319 aa11.34□□□□□ -0.59
CNOT3-201ENST00000221232 PDE6HQ13956 83 aa11.34□□□□□ -0.59
CNOT3-201ENST00000221232 MINOS1Q5TGZ0 78 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms