RNA–Protein interactions for RNA: ENST00000628124.2

GABRB3-216, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2 BASIC

Gene GABRB3, Length 5,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-216ENST00000628124 DKK4Q9UBT3 224 aa7.24□□□□□ -1.25
GABRB3-216ENST00000628124 CDKN1BP46527 198 aa7.23□□□□□ -1.25
GABRB3-216ENST00000628124 C4orf48Q5BLP8 95 aa7.23□□□□□ -1.25
GABRB3-216ENST00000628124 COL22A1Q8NFW1 1626 aaPredicted RBP7.23□□□□□ -1.25
GABRB3-216ENST00000628124 KNCNA6PVL3 124 aa7.23□□□□□ -1.25
GABRB3-216ENST00000628124 SHISA9B4DS77 424 aa7.23□□□□□ -1.25
GABRB3-216ENST00000628124 MSMBP08118 114 aa7.23□□□□□ -1.25
GABRB3-216ENST00000628124 A0A1B0GX51 115 aa7.23□□□□□ -1.25
GABRB3-216ENST00000628124 RNASE2P10153 161 aaKnown RBP7.23□□□□□ -1.25
GABRB3-216ENST00000628124 SAA4P35542 130 aa7.23□□□□□ -1.25
GABRB3-216ENST00000628124 UBE2E1P51965 193 aa7.23□□□□□ -1.25
GABRB3-216ENST00000628124 RHOHQ15669 191 aa7.23□□□□□ -1.25
GABRB3-216ENST00000628124 WFDC9Q8NEX5 89 aa7.23□□□□□ -1.25
GABRB3-216ENST00000628124 TRIOBPQ9H2D6 2365 aa7.23□□□□□ -1.25
GABRB3-216ENST00000628124 CRYBA4P53673 196 aa7.23□□□□□ -1.25
GABRB3-216ENST00000628124 GAFA1Q96PS6 74 aa7.23□□□□□ -1.25
GABRB3-216ENST00000628124 KLHDC3Q9BQ90 382 aa7.23□□□□□ -1.25
GABRB3-216ENST00000628124 NCOR1P1Q9H4R4 102 aa7.23□□□□□ -1.25
GABRB3-216ENST00000628124 GLI3P10071 1580 aa7.23□□□□□ -1.25
GABRB3-216ENST00000628124 SPINK13Q1W4C9 94 aa7.22□□□□□ -1.25
GABRB3-216ENST00000628124 C20orf144Q9BQM9 153 aa7.22□□□□□ -1.25
GABRB3-216ENST00000628124 J3QLI3 93 aa7.22□□□□□ -1.25
GABRB3-216ENST00000628124 PAX9P55771 341 aa7.22□□□□□ -1.25
GABRB3-216ENST00000628124 HERV-K104P63124 156 aa7.22□□□□□ -1.25
GABRB3-216ENST00000628124 LAIR2Q6ISS4 152 aa7.22□□□□□ -1.25
GABRB3-216ENST00000628124 C8orf31Q8N9H6 132 aa7.22□□□□□ -1.25
GABRB3-216ENST00000628124 TSSC4Q9Y5U2 329 aaPredicted RBP7.22□□□□□ -1.25
GABRB3-216ENST00000628124 ZFP36L1Q07352 338 aaKnown RBP7.22□□□□□ -1.25
GABRB3-216ENST00000628124 CD177Q8N6Q3 437 aa7.22□□□□□ -1.25
GABRB3-216ENST00000628124 SELENOKQ9Y6D0 94 aa7.22□□□□□ -1.25
GABRB3-216ENST00000628124 SCN1AP35498 2009 aa7.22□□□□□ -1.25
GABRB3-216ENST00000628124 NDUFA4O00483 81 aa7.22□□□□□ -1.25
GABRB3-216ENST00000628124 IGHG2P01859 326 aa7.22□□□□□ -1.25
GABRB3-216ENST00000628124 NTF4P34130 210 aa7.22□□□□□ -1.25
GABRB3-216ENST00000628124 CFHR2P36980 270 aa7.22□□□□□ -1.25
GABRB3-216ENST00000628124 LGALS9BQ3B8N2 356 aa7.22□□□□□ -1.25
GABRB3-216ENST00000628124 LGALS9CQ6DKI2 356 aa7.22□□□□□ -1.25
GABRB3-216ENST00000628124 PAQR4Q8N4S7 273 aaPredicted RBP7.22□□□□□ -1.25
GABRB3-216ENST00000628124 ZNF503Q96F45 646 aa7.22□□□□□ -1.25
GABRB3-216ENST00000628124 HS3ST6Q96QI5 342 aa7.22□□□□□ -1.25
GABRB3-216ENST00000628124 BTAF1O14981 1849 aa7.22□□□□□ -1.25
GABRB3-216ENST00000628124 ZFC3H1O60293 1989 aaKnown RBP7.22□□□□□ -1.25
GABRB3-216ENST00000628124 SCN7AQ01118 1682 aa7.22□□□□□ -1.25
GABRB3-216ENST00000628124 TINCRA0A1B0GVN0 87 aa7.22□□□□□ -1.25
GABRB3-216ENST00000628124 TFF1P04155 84 aa7.22□□□□□ -1.25
GABRB3-216ENST00000628124 GNLYP22749 145 aa7.22□□□□□ -1.25
GABRB3-216ENST00000628124 CFHR3Q02985 330 aa7.22□□□□□ -1.25
GABRB3-216ENST00000628124 ZNF638Q14966 1978 aaKnown RBP7.22□□□□□ -1.25
GABRB3-216ENST00000628124 FAM186AA6NE01 2351 aa7.21□□□□□ -1.25
GABRB3-216ENST00000628124 IGKV2D-24A0A075B6R9 120 aa7.21□□□□□ -1.25
GABRB3-216ENST00000628124 BTCP35070 178 aa7.21□□□□□ -1.25
GABRB3-216ENST00000628124 LINC01545Q5VT33 79 aa7.21□□□□□ -1.25
GABRB3-216ENST00000628124 SH2D6Q7Z4S9 175 aa7.21□□□□□ -1.25
GABRB3-216ENST00000628124 IGHV3-16A0A0C4DH30 117 aa7.21□□□□□ -1.26
GABRB3-216ENST00000628124 BAALCQ8WXS3 180 aa7.21□□□□□ -1.26
GABRB3-216ENST00000628124 CFHR4Q92496 578 aa7.21□□□□□ -1.26
GABRB3-216ENST00000628124 C1orf43Q9BWL3 253 aa7.21□□□□□ -1.26
GABRB3-216ENST00000628124 ABCA3Q99758 1704 aa7.21□□□□□ -1.26
GABRB3-216ENST00000628124 TGFBR3LH3BV60 316 aa7.21□□□□□ -1.26
GABRB3-216ENST00000628124 Q6ZS49 121 aa7.21□□□□□ -1.26
GABRB3-216ENST00000628124 C20orf78Q9BR46 151 aa7.21□□□□□ -1.26
GABRB3-216ENST00000628124 SCN9AQ15858 1988 aa7.21□□□□□ -1.26
GABRB3-216ENST00000628124 A0A0A6YYD4 124 aa7.21□□□□□ -1.26
GABRB3-216ENST00000628124 IGKV1-12A0A0C4DH73 117 aa7.21□□□□□ -1.26
GABRB3-216ENST00000628124 K7EP34 96 aa7.21□□□□□ -1.26
GABRB3-216ENST00000628124 IGKV1D-12P01611 117 aa7.21□□□□□ -1.26
GABRB3-216ENST00000628124 ZNF362Q5T0B9 420 aaPredicted RBP7.21□□□□□ -1.26
GABRB3-216ENST00000628124 IGFL4Q6B9Z1 124 aa7.21□□□□□ -1.26
GABRB3-216ENST00000628124 SIGLEC1Q9BZZ2 1709 aa7.2□□□□□ -1.26
GABRB3-216ENST00000628124 LAMA4Q16363 1823 aa7.2□□□□□ -1.26
GABRB3-216ENST00000628124 F8VRH5 84 aa7.2□□□□□ -1.26
GABRB3-216ENST00000628124 IL15RAQ13261 267 aa7.2□□□□□ -1.26
GABRB3-216ENST00000628124 AKAP6Q13023 2319 aa7.2□□□□□ -1.26
GABRB3-216ENST00000628124 J3QQQ9 107 aa7.2□□□□□ -1.26
GABRB3-216ENST00000628124 PYGO2Q9BRQ0 406 aa7.2□□□□□ -1.26
GABRB3-216ENST00000628124 BPESC1Q9GZL8 116 aa7.2□□□□□ -1.26
GABRB3-216ENST00000628124 ALS2Q96Q42 1657 aa7.2□□□□□ -1.26
GABRB3-216ENST00000628124 IGKV1D-8A0A087WSZ0 117 aa7.2□□□□□ -1.26
GABRB3-216ENST00000628124 TRAV3A0A0B4J244 114 aa7.2□□□□□ -1.26
GABRB3-216ENST00000628124 C15orf62A8K5M9 175 aa7.2□□□□□ -1.26
GABRB3-216ENST00000628124 K7EMI3 77 aa7.2□□□□□ -1.26
GABRB3-216ENST00000628124 ETDBQ3ZM63 59 aa7.2□□□□□ -1.26
GABRB3-216ENST00000628124 SMIM20Q8N5G0 67 aa7.2□□□□□ -1.26
GABRB3-216ENST00000628124 IGF2BP2-AS1Q96M15 143 aa7.2□□□□□ -1.26
GABRB3-216ENST00000628124 ATP6V0BQ99437 205 aa7.2□□□□□ -1.26
GABRB3-216ENST00000628124 SPATA25Q9BR10 227 aa7.2□□□□□ -1.26
GABRB3-216ENST00000628124 MBD3L4A6NDZ8 208 aaPredicted RBP7.2□□□□□ -1.26
GABRB3-216ENST00000628124 MBD3L3A6NE82 208 aaPredicted RBP7.2□□□□□ -1.26
GABRB3-216ENST00000628124 MBD3L5A6NJ08 208 aaPredicted RBP7.2□□□□□ -1.26
GABRB3-216ENST00000628124 MBD3L2Q8NHZ7 208 aaPredicted RBP7.2□□□□□ -1.26
GABRB3-216ENST00000628124 SPTBN1Q01082 2364 aaKnown RBP7.2□□□□□ -1.26
GABRB3-216ENST00000628124 IGKV1OR2-108A0A075B7D4 117 aa7.19□□□□□ -1.26
GABRB3-216ENST00000628124 H0YGX0 51 aa7.19□□□□□ -1.26
GABRB3-216ENST00000628124 TIRAPP58753 221 aa7.19□□□□□ -1.26
GABRB3-216ENST00000628124 CYTL1Q9NRR1 136 aa7.19□□□□□ -1.26
GABRB3-216ENST00000628124 QSER1Q2KHR3 1735 aa7.19□□□□□ -1.26
GABRB3-216ENST00000628124 IGHV1-69DA0A0B4J2H0 117 aa7.19□□□□□ -1.26
GABRB3-216ENST00000628124 SIVA1O15304 175 aa7.19□□□□□ -1.26
GABRB3-216ENST00000628124 IGHV1-69P01742 117 aa7.19□□□□□ -1.26
GABRB3-216ENST00000628124 HGFACQ04756 655 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms