RNA–Protein interactions for RNA: ENST00000618375.1

SMC5-204, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 5

Gene SMC5, Length 223 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-204ENST00000618375 CISD3P0C7P0 127 aa2.76□□□□□ -1.97
SMC5-204ENST00000618375 ZNF823P16415 610 aa2.76□□□□□ -1.97
SMC5-204ENST00000618375 SPINT3P49223 89 aa2.76□□□□□ -1.97
SMC5-204ENST00000618375 PSMB2P49721 201 aa2.76□□□□□ -1.97
SMC5-204ENST00000618375 SSR4P51571 173 aa2.76□□□□□ -1.97
SMC5-204ENST00000618375 EFNA4P52798 201 aa2.76□□□□□ -1.97
SMC5-204ENST00000618375 FBXW4P57775 412 aa2.76□□□□□ -1.97
SMC5-204ENST00000618375 FXYD3Q14802 87 aa2.76□□□□□ -1.97
SMC5-204ENST00000618375 TWIST1Q15672 202 aa2.76□□□□□ -1.97
SMC5-204ENST00000618375 KISS1Q15726 138 aa2.76□□□□□ -1.97
SMC5-204ENST00000618375 KRTAP27-1Q3LI81 207 aa2.76□□□□□ -1.97
SMC5-204ENST00000618375 VMA21Q3ZAQ7 101 aa2.76□□□□□ -1.97
SMC5-204ENST00000618375 SPANXN5Q5MJ07 72 aa2.76□□□□□ -1.97
SMC5-204ENST00000618375 ZNF793Q6ZN11 406 aa2.76□□□□□ -1.97
SMC5-204ENST00000618375 LINC00643Q86TS7 51 aa2.76□□□□□ -1.97
SMC5-204ENST00000618375 CXorf67Q86X51 503 aaPredicted RBP2.76□□□□□ -1.97
SMC5-204ENST00000618375 EXOC3-AS1Q8N2X6 119 aa2.76□□□□□ -1.97
SMC5-204ENST00000618375 DCAF4L2Q8NA75 395 aa2.76□□□□□ -1.97
SMC5-204ENST00000618375 MBD3L2Q8NHZ7 208 aaPredicted RBP2.76□□□□□ -1.97
SMC5-204ENST00000618375 FAM110DQ8TAY7 271 aaPredicted RBP2.76□□□□□ -1.97
SMC5-204ENST00000618375 CYYR1Q96J86 154 aa2.76□□□□□ -1.97
SMC5-204ENST00000618375 HIST1H4GQ99525 98 aa2.76□□□□□ -1.97
SMC5-204ENST00000618375 OCIAD1Q9NX40 245 aa2.76□□□□□ -1.97
SMC5-204ENST00000618375 RNF181Q9P0P0 153 aa2.76□□□□□ -1.97
SMC5-204ENST00000618375 CACNG5Q9UF02 275 aa2.76□□□□□ -1.97
SMC5-204ENST00000618375 ZNF256Q9Y2P7 627 aaPredicted RBP2.76□□□□□ -1.97
SMC5-204ENST00000618375 KLF13Q9Y2Y9 288 aaPredicted RBP2.76□□□□□ -1.97
SMC5-204ENST00000618375 KLK5Q9Y337 293 aaPredicted RBP2.76□□□□□ -1.97
SMC5-204ENST00000618375 KIAA1549Q9HCM3 1950 aa2.76□□□□□ -1.97
SMC5-204ENST00000618375 SCN10AQ9Y5Y9 1956 aa2.76□□□□□ -1.97
SMC5-204ENST00000618375 COL4A5P29400 1685 aa2.76□□□□□ -1.97
SMC5-204ENST00000618375 DOCK3Q8IZD9 2030 aa2.75□□□□□ -1.97
SMC5-204ENST00000618375 POLR2AP24928 1970 aaKnown RBP2.75□□□□□ -1.97
SMC5-204ENST00000618375 EXPH5Q8NEV8 1989 aa2.75□□□□□ -1.97
SMC5-204ENST00000618375 TRGV11A0A075B6L2 103 aa2.75□□□□□ -1.97
SMC5-204ENST00000618375 A0A096LNJ9 63 aa2.75□□□□□ -1.97
SMC5-204ENST00000618375 TRBV10-2A0A0K0K1G8 114 aa2.75□□□□□ -1.97
SMC5-204ENST00000618375 PGPA6NDG6 321 aa2.75□□□□□ -1.97
SMC5-204ENST00000618375 LINC01546A6NGU7 62 aa2.75□□□□□ -1.97
SMC5-204ENST00000618375 CHEK1O14757 476 aa2.75□□□□□ -1.97
SMC5-204ENST00000618375 FCGR3BO75015 233 aa2.75□□□□□ -1.97
SMC5-204ENST00000618375 ZFAND5O76080 213 aa2.75□□□□□ -1.97
SMC5-204ENST00000618375 TCL1BO95988 128 aa2.75□□□□□ -1.97
SMC5-204ENST00000618375 LTAP01374 205 aa2.75□□□□□ -1.97
SMC5-204ENST00000618375 IGHG2P01859 326 aa2.75□□□□□ -1.97
SMC5-204ENST00000618375 APOHP02749 345 aaPredicted RBP2.75□□□□□ -1.97
SMC5-204ENST00000618375 P0C879 139 aa2.75□□□□□ -1.97
SMC5-204ENST00000618375 PYYP10082 97 aa2.75□□□□□ -1.97
SMC5-204ENST00000618375 COX6A1P12074 109 aa2.75□□□□□ -1.97
SMC5-204ENST00000618375 RPS27P42677 84 aaKnown RBP2.75□□□□□ -1.97
SMC5-204ENST00000618375 EMDP50402 254 aa2.75□□□□□ -1.97
SMC5-204ENST00000618375 NPC2P61916 151 aa2.75□□□□□ -1.97
SMC5-204ENST00000618375 UBE2L3P68036 154 aaKnown RBP2.75□□□□□ -1.97
SMC5-204ENST00000618375 MRPS36P82909 103 aaKnown RBP2.75□□□□□ -1.97
SMC5-204ENST00000618375 LOXL1Q08397 574 aaPredicted RBP2.75□□□□□ -1.97
SMC5-204ENST00000618375 ZC2HC1BQ5TFG8 222 aa2.75□□□□□ -1.97
SMC5-204ENST00000618375 PLPP4Q5VZY2 271 aa2.75□□□□□ -1.97
SMC5-204ENST00000618375 C22orf39Q6P5X5 142 aa2.75□□□□□ -1.97
SMC5-204ENST00000618375 Q6ZR03 302 aa2.75□□□□□ -1.97
SMC5-204ENST00000618375 ZNF818PQ6ZRF7 136 aa2.75□□□□□ -1.97
SMC5-204ENST00000618375 C5orf38Q86SI9 138 aa2.75□□□□□ -1.97
SMC5-204ENST00000618375 PLXDC1Q8IUK5 500 aa2.75□□□□□ -1.97
SMC5-204ENST00000618375 C3orf56Q8N813 242 aa2.75□□□□□ -1.97
SMC5-204ENST00000618375 SCAMP4Q969E2 229 aa2.75□□□□□ -1.97
SMC5-204ENST00000618375 NABP1Q96AH0 204 aa2.75□□□□□ -1.97
SMC5-204ENST00000618375 FAM19A4Q96LR4 140 aa2.75□□□□□ -1.97
SMC5-204ENST00000618375 VKORC1Q9BQB6 163 aa2.75□□□□□ -1.97
SMC5-204ENST00000618375 UPK3BQ9BT76 320 aa2.75□□□□□ -1.97
SMC5-204ENST00000618375 RPP21Q9H633 154 aaKnown RBP2.75□□□□□ -1.97
SMC5-204ENST00000618375 LAMTOR3Q9UHA4 124 aa2.75□□□□□ -1.97
SMC5-204ENST00000618375 LINC00527Q9UJ94 153 aa2.75□□□□□ -1.97
SMC5-204ENST00000618375 KIF26BQ2KJY2 2108 aa2.75□□□□□ -1.97
SMC5-204ENST00000618375 PTPRBP23467 1997 aa2.74□□□□□ -1.97
SMC5-204ENST00000618375 RAI1Q7Z5J4 1906 aaPredicted RBP2.74□□□□□ -1.97
SMC5-204ENST00000618375 NCOA6Q14686 2063 aaPredicted RBP2.74□□□□□ -1.97
SMC5-204ENST00000618375 SMIM26A0A096LP01 95 aa2.74□□□□□ -1.97
SMC5-204ENST00000618375 IGKV2D-26A0A0A0MRZ7 120 aa2.74□□□□□ -1.97
SMC5-204ENST00000618375 TRBV6-6A0A0A6YYG2 114 aa2.74□□□□□ -1.97
SMC5-204ENST00000618375 TRGV5A0A0B4J1U4 118 aa2.74□□□□□ -1.97
SMC5-204ENST00000618375 IGKV1-9A0A0C4DH69 117 aa2.74□□□□□ -1.97
SMC5-204ENST00000618375 LOC101059948A0A1B0GTJ6 334 aa2.74□□□□□ -1.97
SMC5-204ENST00000618375 WI2-2373I1.2A0A1W2PRP0 233 aa2.74□□□□□ -1.97
SMC5-204ENST00000618375 C5orf63A6NC05 138 aa2.74□□□□□ -1.97
SMC5-204ENST00000618375 SRRM4A7MD48 611 aaKnown RBP2.74□□□□□ -1.97
SMC5-204ENST00000618375 TMEM150CB9EJG8 249 aa2.74□□□□□ -1.97
SMC5-204ENST00000618375 TEX22C9J3V5 150 aa2.74□□□□□ -1.97
SMC5-204ENST00000618375 H7C1H1 209 aa2.74□□□□□ -1.97
SMC5-204ENST00000618375 IGKV1-5P01602 117 aa2.74□□□□□ -1.97
SMC5-204ENST00000618375 CA6P23280 308 aa2.74□□□□□ -1.97
SMC5-204ENST00000618375 LEPP41159 167 aa2.74□□□□□ -1.97
SMC5-204ENST00000618375 CCL11P51671 97 aa2.74□□□□□ -1.97
SMC5-204ENST00000618375 DLX1P56177 255 aa2.74□□□□□ -1.97
SMC5-204ENST00000618375 ATP5EP56381 51 aaPredicted RBP2.74□□□□□ -1.97
SMC5-204ENST00000618375 LOXL3P58215 753 aa2.74□□□□□ -1.97
SMC5-204ENST00000618375 RPS18P62269 152 aaKnown RBP2.74□□□□□ -1.97
SMC5-204ENST00000618375 CCL8P80075 99 aa2.74□□□□□ -1.97
SMC5-204ENST00000618375 PAX8Q06710 450 aa2.74□□□□□ -1.97
SMC5-204ENST00000618375 FAM27E3Q08E93 113 aa2.74□□□□□ -1.97
SMC5-204ENST00000618375 SRSF9Q13242 221 aaKnown RBP eCLIP2.74□□□□□ -1.97
SMC5-204ENST00000618375 OR1C1Q15619 314 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms