RNA–Protein interactions for RNA: ENST00000617771.5

VEGFA-228, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-228ENST00000617771 MRPS12O15235 138 aaKnown RBP18.04■□□□□ 0.48
VEGFA-228ENST00000617771 INSP01308 110 aa18.04■□□□□ 0.48
VEGFA-228ENST00000617771 RAB32Q13637 225 aa18.04■□□□□ 0.48
VEGFA-228ENST00000617771 PSG3Q16557 428 aa18.04■□□□□ 0.48
VEGFA-228ENST00000617771 SPINK13Q1W4C9 94 aa18.04■□□□□ 0.48
VEGFA-228ENST00000617771 C10orf113Q5VZT2 155 aa18.04■□□□□ 0.48
VEGFA-228ENST00000617771 LCN15Q6UWW0 184 aa18.04■□□□□ 0.48
VEGFA-228ENST00000617771 Q6ZRG5 221 aa18.04■□□□□ 0.48
VEGFA-228ENST00000617771 NRARPQ7Z6K4 114 aa18.04■□□□□ 0.48
VEGFA-228ENST00000617771 STX12Q86Y82 276 aa18.04■□□□□ 0.48
VEGFA-228ENST00000617771 BPIFA4PQ86YQ2 179 aa18.04■□□□□ 0.48
VEGFA-228ENST00000617771 DKK2Q9UBU2 259 aa18.04■□□□□ 0.48
VEGFA-228ENST00000617771 BIRC6Q9NR09 4857 aa18.03■□□□□ 0.48
VEGFA-228ENST00000617771 S100A11P31949 105 aa18.03■□□□□ 0.48
VEGFA-228ENST00000617771 SULT1A1P50225 295 aa18.03■□□□□ 0.48
VEGFA-228ENST00000617771 IL15RAQ13261 267 aa18.03■□□□□ 0.48
VEGFA-228ENST00000617771 OR8A1Q8NGG7 326 aa18.03■□□□□ 0.48
VEGFA-228ENST00000617771 GPN1Q9HCN4 374 aaPredicted RBP18.03■□□□□ 0.48
VEGFA-228ENST00000617771 M0R2Z0 102 aa18.02■□□□□ 0.48
VEGFA-228ENST00000617771 UPK1BO75841 260 aa18.02■□□□□ 0.48
VEGFA-228ENST00000617771 HBG1P69891 147 aa18.02■□□□□ 0.48
VEGFA-228ENST00000617771 HBG2P69892 147 aa18.02■□□□□ 0.48
VEGFA-228ENST00000617771 PRR20EP86478 221 aa18.02■□□□□ 0.48
VEGFA-228ENST00000617771 PRR20CP86479 221 aa18.02■□□□□ 0.48
VEGFA-228ENST00000617771 PRR20DP86480 221 aa18.02■□□□□ 0.48
VEGFA-228ENST00000617771 PRR20BP86481 221 aa18.02■□□□□ 0.48
VEGFA-228ENST00000617771 PRR20AP86496 221 aa18.02■□□□□ 0.48
VEGFA-228ENST00000617771 HIST1H1AQ02539 215 aaPredicted RBP18.02■□□□□ 0.48
VEGFA-228ENST00000617771 FAM222AQ5U5X8 452 aa18.02■□□□□ 0.48
VEGFA-228ENST00000617771 TMEM37Q8WXS4 190 aa18.02■□□□□ 0.48
VEGFA-228ENST00000617771 SLC50A1Q9BRV3 221 aa18.02■□□□□ 0.48
VEGFA-228ENST00000617771 NIPSNAP3BQ9BS92 247 aa18.02■□□□□ 0.48
VEGFA-228ENST00000617771 PPP1R14DQ9NXH3 145 aa18.02■□□□□ 0.48
VEGFA-228ENST00000617771 WDR83OSQ9Y284 106 aa18.02■□□□□ 0.48
VEGFA-228ENST00000617771 A6NHS1 94 aa18.01■□□□□ 0.47
VEGFA-228ENST00000617771 BOLA2-SMG1P6H3BVE0 249 aa18.01■□□□□ 0.47
VEGFA-228ENST00000617771 B2MP61769 119 aa18.01■□□□□ 0.47
VEGFA-228ENST00000617771 RHOBP62745 196 aa18.01■□□□□ 0.47
VEGFA-228ENST00000617771 VWC2Q2TAL6 325 aa18.01■□□□□ 0.47
VEGFA-228ENST00000617771 TMEM252Q8N6L7 170 aa18.01■□□□□ 0.47
VEGFA-228ENST00000617771 OR1L4Q8NGR5 311 aa18.01■□□□□ 0.47
VEGFA-228ENST00000617771 NDUFAF3Q9BU61 184 aa18.01■□□□□ 0.47
VEGFA-228ENST00000617771 DNAJC4Q9NNZ3 241 aa18.01■□□□□ 0.47
VEGFA-228ENST00000617771 IGSF23A1L1A6 192 aa18■□□□□ 0.47
VEGFA-228ENST00000617771 CRXO43186 299 aaPredicted RBP18■□□□□ 0.47
VEGFA-228ENST00000617771 MIC13Q5XKP0 118 aa18■□□□□ 0.47
VEGFA-228ENST00000617771 RPUSD4Q96CM3 377 aaKnown RBP18■□□□□ 0.47
VEGFA-228ENST00000617771 ZNF331Q9NQX6 463 aaPredicted RBP18■□□□□ 0.47
VEGFA-228ENST00000617771 PTTG2Q9NZH5 202 aa18■□□□□ 0.47
VEGFA-228ENST00000617771 YTHDF2Q9Y5A9 579 aaKnown RBP18■□□□□ 0.47
VEGFA-228ENST00000617771 UBE2L5PA0A1B0GUS4 154 aa17.99■□□□□ 0.47
VEGFA-228ENST00000617771 BAXQ07812 192 aa17.99■□□□□ 0.47
VEGFA-228ENST00000617771 OPCMLQ14982 345 aa17.99■□□□□ 0.47
VEGFA-228ENST00000617771 PFDN5Q99471 154 aa17.99■□□□□ 0.47
VEGFA-228ENST00000617771 RPL29P47914 159 aaKnown RBP17.98■□□□□ 0.47
VEGFA-228ENST00000617771 OXA1LQ15070 435 aa17.98■□□□□ 0.47
VEGFA-228ENST00000617771 ATP6V1FQ16864 119 aa17.98■□□□□ 0.47
VEGFA-228ENST00000617771 BAP18Q8IXM2 172 aa17.98■□□□□ 0.47
VEGFA-228ENST00000617771 SNRPCP09234 159 aaKnown RBP17.97■□□□□ 0.47
VEGFA-228ENST00000617771 MORN5Q5VZ52 161 aa17.97■□□□□ 0.47
VEGFA-228ENST00000617771 FAM210BQ96KR6 192 aa17.97■□□□□ 0.47
VEGFA-228ENST00000617771 PXMP4Q9Y6I8 212 aa17.97■□□□□ 0.47
VEGFA-228ENST00000617771 VPS13DQ5THJ4 4388 aa17.97■□□□□ 0.47
VEGFA-228ENST00000617771 TRAV12-2A0A075B6T6 113 aa17.96■□□□□ 0.47
VEGFA-228ENST00000617771 PRAF2O60831 178 aa17.96■□□□□ 0.47
VEGFA-228ENST00000617771 RLN2P04090 185 aa17.96■□□□□ 0.47
VEGFA-228ENST00000617771 IGLC2P0DOY2 106 aa17.96■□□□□ 0.47
VEGFA-228ENST00000617771 CHAC2Q8WUX2 184 aa17.96■□□□□ 0.47
VEGFA-228ENST00000617771 SLC39A9Q9NUM3 307 aa17.96■□□□□ 0.47
VEGFA-228ENST00000617771 ZNF705GA8MUZ8 300 aaPredicted RBP17.95■□□□□ 0.46
VEGFA-228ENST00000617771 P0DMU3 169 aa17.95■□□□□ 0.46
VEGFA-228ENST00000617771 FAM231AP0DMU4 169 aa17.95■□□□□ 0.46
VEGFA-228ENST00000617771 FAM231CP0DMU5 169 aa17.95■□□□□ 0.46
VEGFA-228ENST00000617771 FGF7P21781 194 aa17.95■□□□□ 0.46
VEGFA-228ENST00000617771 DAD1P61803 113 aa17.95■□□□□ 0.46
VEGFA-228ENST00000617771 GUK1Q16774 197 aa17.95■□□□□ 0.46
VEGFA-228ENST00000617771 TMEM256Q8N2U0 113 aa17.95■□□□□ 0.46
VEGFA-228ENST00000617771 MPDU1O75352 247 aa17.94■□□□□ 0.46
VEGFA-228ENST00000617771 IFITM3Q01628 133 aa17.94■□□□□ 0.46
VEGFA-228ENST00000617771 NMES1Q9C002 83 aa17.94■□□□□ 0.46
VEGFA-228ENST00000617771 PLA2G2EQ9NZK7 142 aa17.94■□□□□ 0.46
VEGFA-228ENST00000617771 INMT-MINDY4F8WBC2 141 aa17.93■□□□□ 0.46
VEGFA-228ENST00000617771 H3BTX0 84 aa17.93■□□□□ 0.46
VEGFA-228ENST00000617771 SLC17A3O00476 420 aa17.93■□□□□ 0.46
VEGFA-228ENST00000617771 SIX6O95475 246 aa17.93■□□□□ 0.46
VEGFA-228ENST00000617771 HTN3P15516 51 aa17.93■□□□□ 0.46
VEGFA-228ENST00000617771 TSPOP30536 169 aa17.93■□□□□ 0.46
VEGFA-228ENST00000617771 CDKN1BP46527 198 aa17.93■□□□□ 0.46
VEGFA-228ENST00000617771 OR10J6PQ8NGY7 276 aa17.93■□□□□ 0.46
VEGFA-228ENST00000617771 LINC01587Q99440 93 aa17.93■□□□□ 0.46
VEGFA-228ENST00000617771 SLC25A31Q9H0C2 315 aa17.93■□□□□ 0.46
VEGFA-228ENST00000617771 DNAH6Q9C0G6 4158 aa17.93■□□□□ 0.46
VEGFA-228ENST00000617771 TRAV5A0A0B4J249 113 aa17.92■□□□□ 0.46
VEGFA-228ENST00000617771 LYRM9A8MSI8 78 aa17.92■□□□□ 0.46
VEGFA-228ENST00000617771 E5RGE8 158 aa17.92■□□□□ 0.46
VEGFA-228ENST00000617771 H3BQ15 152 aa17.92■□□□□ 0.46
VEGFA-228ENST00000617771 PRB4P10163 310 aaPredicted RBP17.92■□□□□ 0.46
VEGFA-228ENST00000617771 CYCSP99999 105 aaKnown RBP17.92■□□□□ 0.46
VEGFA-228ENST00000617771 SAT2Q96F10 170 aaPredicted RBP17.92■□□□□ 0.46
VEGFA-228ENST00000617771 PRM2P04554 102 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 243.5 ms