RNA–Protein interactions for RNA: ENST00000616825.4

ATXN2-227, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ATXN2, Length 4,575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-227ENST00000616825 A0A0G2JRQ6 117 aa14.39□□□□□ -0.11
ATXN2-227ENST00000616825 TMEM238C9JI98 176 aa14.39□□□□□ -0.11
ATXN2-227ENST00000616825 MLANAQ16655 118 aa14.39□□□□□ -0.11
ATXN2-227ENST00000616825 RNF166Q96A37 237 aaPredicted RBP14.39□□□□□ -0.11
ATXN2-227ENST00000616825 ZNF479Q96JC4 524 aa14.39□□□□□ -0.11
ATXN2-227ENST00000616825 SORL1Q92673 2214 aa14.39□□□□□ -0.11
ATXN2-227ENST00000616825 A0A1B0GV72 72 aa14.39□□□□□ -0.11
ATXN2-227ENST00000616825 HSD52Q0P140 79 aa14.39□□□□□ -0.11
ATXN2-227ENST00000616825 AMBPP02760 352 aa14.39□□□□□ -0.11
ATXN2-227ENST00000616825 RPL35AP18077 110 aaKnown RBP14.39□□□□□ -0.11
ATXN2-227ENST00000616825 GATA3P23771 443 aa14.39□□□□□ -0.11
ATXN2-227ENST00000616825 PSG3Q16557 428 aa14.39□□□□□ -0.11
ATXN2-227ENST00000616825 DEFB121Q5J5C9 76 aa14.39□□□□□ -0.11
ATXN2-227ENST00000616825 ERG28Q9UKR5 140 aa14.39□□□□□ -0.11
ATXN2-227ENST00000616825 IGHV3-73A0A0B4J1V6 119 aa14.39□□□□□ -0.11
ATXN2-227ENST00000616825 UBE2CO00762 179 aa14.39□□□□□ -0.11
ATXN2-227ENST00000616825 TOMM40O96008 361 aa14.39□□□□□ -0.11
ATXN2-227ENST00000616825 IGHV4-39P01824 125 aa14.39□□□□□ -0.11
ATXN2-227ENST00000616825 MEGF9Q9H1U4 602 aa14.39□□□□□ -0.11
ATXN2-227ENST00000616825 C14orf178Q8N769 122 aaPredicted RBP14.38□□□□□ -0.11
ATXN2-227ENST00000616825 UBE2E2Q96LR5 201 aa14.38□□□□□ -0.11
ATXN2-227ENST00000616825 SH2D1AO60880 128 aa14.38□□□□□ -0.11
ATXN2-227ENST00000616825 MSMBP08118 114 aa14.38□□□□□ -0.11
ATXN2-227ENST00000616825 TDGF1P3P51864 188 aa14.38□□□□□ -0.11
ATXN2-227ENST00000616825 HIST3H2BBQ8N257 126 aa14.38□□□□□ -0.11
ATXN2-227ENST00000616825 PLEKHB2Q96CS7 222 aa14.38□□□□□ -0.11
ATXN2-227ENST00000616825 C1orf159Q96HA4 380 aa14.38□□□□□ -0.11
ATXN2-227ENST00000616825 OTOGLQ3ZCN5 2332 aa14.38□□□□□ -0.11
ATXN2-227ENST00000616825 TEX43Q6ZNM6 134 aa14.38□□□□□ -0.11
ATXN2-227ENST00000616825 FNDC4Q9H6D8 234 aaPredicted RBP14.38□□□□□ -0.11
ATXN2-227ENST00000616825 INSP01308 110 aa14.37□□□□□ -0.11
ATXN2-227ENST00000616825 PAX4O43316 350 aa14.37□□□□□ -0.11
ATXN2-227ENST00000616825 IGHV3-53P01767 116 aa14.37□□□□□ -0.11
ATXN2-227ENST00000616825 RIPPLY3P57055 190 aa14.37□□□□□ -0.11
ATXN2-227ENST00000616825 PDE6HQ13956 83 aa14.37□□□□□ -0.11
ATXN2-227ENST00000616825 SSC4DQ8WTU2 575 aa14.37□□□□□ -0.11
ATXN2-227ENST00000616825 A0A1W2PPI3 338 aa14.37□□□□□ -0.11
ATXN2-227ENST00000616825 SYNJ2BPP57105 145 aa14.37□□□□□ -0.11
ATXN2-227ENST00000616825 RPRMLQ8N4K4 120 aa14.37□□□□□ -0.11
ATXN2-227ENST00000616825 NUP35Q8NFH5 326 aa14.37□□□□□ -0.11
ATXN2-227ENST00000616825 CST9LQ9H4G1 147 aa14.37□□□□□ -0.11
ATXN2-227ENST00000616825 ETV2O00321 342 aaPredicted RBP14.37□□□□□ -0.11
ATXN2-227ENST00000616825 UBE2E1P51965 193 aa14.37□□□□□ -0.11
ATXN2-227ENST00000616825 IGFL4Q6B9Z1 124 aa14.37□□□□□ -0.11
ATXN2-227ENST00000616825 UBE2DNLQ8IWF7 75 aa14.37□□□□□ -0.11
ATXN2-227ENST00000616825 M0R2P5 195 aa14.36□□□□□ -0.11
ATXN2-227ENST00000616825 TCF20Q9UGU0 1960 aaKnown RBP14.36□□□□□ -0.11
ATXN2-227ENST00000616825 TNFSF13O75888 250 aa14.36□□□□□ -0.11
ATXN2-227ENST00000616825 LMO1P25800 156 aa14.36□□□□□ -0.11
ATXN2-227ENST00000616825 A8MWV9 139 aa14.36□□□□□ -0.11
ATXN2-227ENST00000616825 C6orf226Q5I0X4 101 aa14.36□□□□□ -0.11
ATXN2-227ENST00000616825 RNF223E7ERA6 249 aa14.35□□□□□ -0.11
ATXN2-227ENST00000616825 PRR30Q53SZ7 412 aaPredicted RBP14.35□□□□□ -0.11
ATXN2-227ENST00000616825 SHANK2-AS3Q9BTD1 123 aa14.35□□□□□ -0.11
ATXN2-227ENST00000616825 MED13Q9UHV7 2174 aa14.35□□□□□ -0.11
ATXN2-227ENST00000616825 HS3ST6Q96QI5 342 aa14.35□□□□□ -0.11
ATXN2-227ENST00000616825 SP5Q6BEB4 398 aaPredicted RBP14.35□□□□□ -0.11
ATXN2-227ENST00000616825 C3orf56Q8N813 242 aa14.35□□□□□ -0.11
ATXN2-227ENST00000616825 RASL10AQ92737 203 aa14.35□□□□□ -0.11
ATXN2-227ENST00000616825 LIME1Q9H400 295 aa14.35□□□□□ -0.11
ATXN2-227ENST00000616825 LSM4Q9Y4Z0 139 aaKnown RBP14.35□□□□□ -0.11
ATXN2-227ENST00000616825 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.34□□□□□ -0.11
ATXN2-227ENST00000616825 FXYD7P58549 80 aa14.34□□□□□ -0.11
ATXN2-227ENST00000616825 DEFB131AP59861 70 aa14.34□□□□□ -0.11
ATXN2-227ENST00000616825 ATXN8Q156A1 80 aa14.34□□□□□ -0.11
ATXN2-227ENST00000616825 IGFL3Q6UXB1 125 aa14.34□□□□□ -0.11
ATXN2-227ENST00000616825 HIVEP2P31629 2446 aa14.34□□□□□ -0.11
ATXN2-227ENST00000616825 SRSF4Q08170 494 aaKnown RBP14.34□□□□□ -0.11
ATXN2-227ENST00000616825 FHL1Q13642 323 aa14.34□□□□□ -0.11
ATXN2-227ENST00000616825 CSTL1Q9H114 145 aa14.34□□□□□ -0.11
ATXN2-227ENST00000616825 IGKV1-6A0A0C4DH72 117 aa14.33□□□□□ -0.11
ATXN2-227ENST00000616825 GATA4P43694 442 aa14.33□□□□□ -0.11
ATXN2-227ENST00000616825 ZNF124Q15973 351 aa14.33□□□□□ -0.11
ATXN2-227ENST00000616825 TMEM256Q8N2U0 113 aa14.33□□□□□ -0.11
ATXN2-227ENST00000616825 CCDC168Q8NDH2 2452 aa14.33□□□□□ -0.12
ATXN2-227ENST00000616825 ARMS2P0C7Q2 107 aa14.33□□□□□ -0.12
ATXN2-227ENST00000616825 HEATR5AQ86XA9 2040 aa14.33□□□□□ -0.12
ATXN2-227ENST00000616825 DMRTC2Q8IXT2 367 aaPredicted RBP14.32□□□□□ -0.12
ATXN2-227ENST00000616825 DEFB104AQ8WTQ1 72 aa14.32□□□□□ -0.12
ATXN2-227ENST00000616825 DYSFO75923 2080 aa14.32□□□□□ -0.12
ATXN2-227ENST00000616825 PHLDA1Q8WV24 401 aaPredicted RBP14.32□□□□□ -0.12
ATXN2-227ENST00000616825 DEFB130BP0DP73 79 aa14.32□□□□□ -0.12
ATXN2-227ENST00000616825 DEFB130AP0DP74 79 aa14.32□□□□□ -0.12
ATXN2-227ENST00000616825 ZC2HC1BQ5TFG8 222 aa14.32□□□□□ -0.12
ATXN2-227ENST00000616825 BCL6BQ8N143 479 aaPredicted RBP14.32□□□□□ -0.12
ATXN2-227ENST00000616825 PRR31Q5SQ13 230 aa14.32□□□□□ -0.12
ATXN2-227ENST00000616825 NDUFB8O95169 186 aa14.31□□□□□ -0.12
ATXN2-227ENST00000616825 AMN1Q8IY45 258 aa14.31□□□□□ -0.12
ATXN2-227ENST00000616825 CEACAM8P31997 349 aaPredicted RBP14.31□□□□□ -0.12
ATXN2-227ENST00000616825 LINC00479Q96M42 142 aa14.31□□□□□ -0.12
ATXN2-227ENST00000616825 NCOR1P1Q9H4R4 102 aa14.31□□□□□ -0.12
ATXN2-227ENST00000616825 A0A0G2JMZ2 1700 aa14.31□□□□□ -0.12
ATXN2-227ENST00000616825 LRRC37A2A6NM11 1700 aa14.31□□□□□ -0.12
ATXN2-227ENST00000616825 YPEL3P61236 119 aaPredicted RBP14.31□□□□□ -0.12
ATXN2-227ENST00000616825 FAM110DQ8TAY7 271 aaPredicted RBP14.31□□□□□ -0.12
ATXN2-227ENST00000616825 TMEM158Q8WZ71 300 aa14.31□□□□□ -0.12
ATXN2-227ENST00000616825 MRPL27Q9P0M9 148 aaKnown RBP14.31□□□□□ -0.12
ATXN2-227ENST00000616825 ATP6V0E1O15342 81 aa14.31□□□□□ -0.12
ATXN2-227ENST00000616825 GUSBP1Q15486 140 aa14.31□□□□□ -0.12
ATXN2-227ENST00000616825 SAMD5Q5TGI4 173 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms