RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 OTORQ9NRC9 128 aa6.86□□□□□ -1.31
CCDC47-207ENST00000612558 SERTAD4Q9NUC0 356 aa6.86□□□□□ -1.31
CCDC47-207ENST00000612558 PEF1Q9UBV8 284 aaKnown RBP6.86□□□□□ -1.31
CCDC47-207ENST00000612558 EPDR1Q9UM22 224 aa6.86□□□□□ -1.31
CCDC47-207ENST00000612558 LY96Q9Y6Y9 160 aa6.86□□□□□ -1.31
CCDC47-207ENST00000612558 TRBV20OR9-2A0A075B6H5 130 aa6.85□□□□□ -1.31
CCDC47-207ENST00000612558 C9JCJ5 164 aa6.85□□□□□ -1.31
CCDC47-207ENST00000612558 H3BTX0 84 aa6.85□□□□□ -1.31
CCDC47-207ENST00000612558 PEX7O00628 323 aa6.85□□□□□ -1.31
CCDC47-207ENST00000612558 GGCTO75223 188 aaKnown RBP6.85□□□□□ -1.31
CCDC47-207ENST00000612558 LY6G6DO95868 133 aa6.85□□□□□ -1.31
CCDC47-207ENST00000612558 MT-ND4LP03901 98 aa6.85□□□□□ -1.31
CCDC47-207ENST00000612558 SLC25A5P05141 298 aaKnown RBP6.85□□□□□ -1.31
CCDC47-207ENST00000612558 SRD5A1P18405 259 aa6.85□□□□□ -1.31
CCDC47-207ENST00000612558 TAS2R60P59551 318 aa6.85□□□□□ -1.31
CCDC47-207ENST00000612558 C10orf99Q6UWK7 81 aa6.85□□□□□ -1.31
CCDC47-207ENST00000612558 LINC01551Q86U37 167 aa6.85□□□□□ -1.31
CCDC47-207ENST00000612558 RNF152Q8N8N0 203 aa6.85□□□□□ -1.31
CCDC47-207ENST00000612558 C5orf17Q8NAS9 161 aa6.85□□□□□ -1.31
CCDC47-207ENST00000612558 SMR3AQ99954 134 aa6.85□□□□□ -1.31
CCDC47-207ENST00000612558 TMEM242Q9NWH2 141 aa6.85□□□□□ -1.31
CCDC47-207ENST00000612558 CDC42EP3Q9UKI2 254 aa6.85□□□□□ -1.31
CCDC47-207ENST00000612558 CXorf65A6NEN9 183 aa6.84□□□□□ -1.31
CCDC47-207ENST00000612558 TSPAN4O14817 238 aa6.84□□□□□ -1.31
CCDC47-207ENST00000612558 GNG4P50150 75 aa6.84□□□□□ -1.31
CCDC47-207ENST00000612558 CNN1P51911 297 aaKnown RBP6.84□□□□□ -1.31
CCDC47-207ENST00000612558 RPL15P61313 204 aaKnown RBP6.84□□□□□ -1.31
CCDC47-207ENST00000612558 CMTM2Q8TAZ6 248 aa6.84□□□□□ -1.31
CCDC47-207ENST00000612558 MYOZ3Q8TDC0 251 aa6.84□□□□□ -1.31
CCDC47-207ENST00000612558 ZNF418Q8TF45 676 aaPredicted RBP6.84□□□□□ -1.31
CCDC47-207ENST00000612558 UBE2E2Q96LR5 201 aa6.84□□□□□ -1.31
CCDC47-207ENST00000612558 C17orf77Q96MU5 243 aa6.84□□□□□ -1.31
CCDC47-207ENST00000612558 CTDSP1Q9GZU7 261 aa6.84□□□□□ -1.31
CCDC47-207ENST00000612558 ESM1Q9NQ30 184 aa6.84□□□□□ -1.31
CCDC47-207ENST00000612558 U3KQE9 123 aa6.84□□□□□ -1.31
CCDC47-207ENST00000612558 CRYBA1P05813 215 aa6.83□□□□□ -1.32
CCDC47-207ENST00000612558 S100A9P06702 114 aaKnown RBP6.83□□□□□ -1.32
CCDC47-207ENST00000612558 ATF4P18848 351 aaPredicted RBP6.83□□□□□ -1.32
CCDC47-207ENST00000612558 PSG9Q00887 426 aa6.83□□□□□ -1.32
CCDC47-207ENST00000612558 RNF212Q495C1 297 aa6.83□□□□□ -1.32
CCDC47-207ENST00000612558 SIGLEC15Q6ZMC9 328 aa6.83□□□□□ -1.32
CCDC47-207ENST00000612558 Q6ZSV7 163 aa6.83□□□□□ -1.32
CCDC47-207ENST00000612558 GPHB5Q86YW7 130 aa6.83□□□□□ -1.32
CCDC47-207ENST00000612558 EXOC3-AS1Q8N2X6 119 aa6.83□□□□□ -1.32
CCDC47-207ENST00000612558 KLHDC1Q8N7A1 406 aa6.83□□□□□ -1.32
CCDC47-207ENST00000612558 C15orf54Q8N8G6 183 aa6.83□□□□□ -1.32
CCDC47-207ENST00000612558 OCC1Q8TAD7 63 aa6.83□□□□□ -1.32
CCDC47-207ENST00000612558 ANAPC16Q96DE5 110 aa6.83□□□□□ -1.32
CCDC47-207ENST00000612558 ATG101Q9BSB4 218 aa6.83□□□□□ -1.32
CCDC47-207ENST00000612558 AAMDCQ9H7C9 122 aa6.83□□□□□ -1.32
CCDC47-207ENST00000612558 SMAD5-AS1Q9Y6J3 95 aa6.83□□□□□ -1.32
CCDC47-207ENST00000612558 FLNBO75369 2602 aaKnown RBP6.83□□□□□ -1.32
CCDC47-207ENST00000612558 A0A087X0K7 114 aa6.82□□□□□ -1.32
CCDC47-207ENST00000612558 ZNF320A2RRD8 509 aa6.82□□□□□ -1.32
CCDC47-207ENST00000612558 PGPEP1LA6NFU8 196 aa6.82□□□□□ -1.32
CCDC47-207ENST00000612558 ZNF207O43670 478 aaKnown RBP6.82□□□□□ -1.32
CCDC47-207ENST00000612558 ZNF253O75346 499 aa6.82□□□□□ -1.32
CCDC47-207ENST00000612558 APOHP02749 345 aaPredicted RBP6.82□□□□□ -1.32
CCDC47-207ENST00000612558 TCRAP04437 139 aa6.82□□□□□ -1.32
CCDC47-207ENST00000612558 CD99P14209 185 aa6.82□□□□□ -1.32
CCDC47-207ENST00000612558 GALR1P47211 349 aa6.82□□□□□ -1.32
CCDC47-207ENST00000612558 MEOX2P50222 304 aa6.82□□□□□ -1.32
CCDC47-207ENST00000612558 HILS1P60008 231 aa6.82□□□□□ -1.32
CCDC47-207ENST00000612558 GNG5P63218 68 aa6.82□□□□□ -1.32
CCDC47-207ENST00000612558 TMEM183BQ1AE95 376 aa6.82□□□□□ -1.32
CCDC47-207ENST00000612558 FAM106AQ4KMX7 169 aa6.82□□□□□ -1.32
CCDC47-207ENST00000612558 CENPWQ5EE01 88 aa6.82□□□□□ -1.32
CCDC47-207ENST00000612558 UNQ9165/PRO28630Q6UXU0 137 aa6.82□□□□□ -1.32
CCDC47-207ENST00000612558 ISOC2Q96AB3 205 aa6.82□□□□□ -1.32
CCDC47-207ENST00000612558 LINC00479Q96M42 142 aa6.82□□□□□ -1.32
CCDC47-207ENST00000612558 OR5B12Q96R08 314 aa6.82□□□□□ -1.32
CCDC47-207ENST00000612558 AURKAIP1Q9NWT8 199 aaPredicted RBP6.82□□□□□ -1.32
CCDC47-207ENST00000612558 KLF12Q9Y4X4 402 aa6.82□□□□□ -1.32
CCDC47-207ENST00000612558 OTOGQ6ZRI0 2925 aa6.82□□□□□ -1.32
CCDC47-207ENST00000612558 IGHV3-66A0A0C4DH42 116 aa6.82□□□□□ -1.32
CCDC47-207ENST00000612558 A0A1W2PS18 150 aa6.82□□□□□ -1.32
CCDC47-207ENST00000612558 COLCA2A8K830 154 aa6.82□□□□□ -1.32
CCDC47-207ENST00000612558 ZNF785A8K8V0 405 aa6.82□□□□□ -1.32
CCDC47-207ENST00000612558 SLC17A3O00476 420 aa6.82□□□□□ -1.32
CCDC47-207ENST00000612558 PPP1R2P9O14990 202 aa6.82□□□□□ -1.32
CCDC47-207ENST00000612558 LGALS1P09382 135 aaKnown RBP6.82□□□□□ -1.32
CCDC47-207ENST00000612558 UBE2G1P62253 170 aa6.82□□□□□ -1.32
CCDC47-207ENST00000612558 RPEL1Q2QD12 228 aa6.82□□□□□ -1.32
CCDC47-207ENST00000612558 C16orf54Q6UWD8 224 aa6.82□□□□□ -1.32
CCDC47-207ENST00000612558 GRAMD2BQ96HH9 432 aa6.82□□□□□ -1.32
CCDC47-207ENST00000612558 FMC1Q96HJ9 113 aa6.82□□□□□ -1.32
CCDC47-207ENST00000612558 IGF2BP2-AS1Q96M15 143 aa6.82□□□□□ -1.32
CCDC47-207ENST00000612558 JMJD8Q96S16 334 aa6.82□□□□□ -1.32
CCDC47-207ENST00000612558 RPH3ALQ9UNE2 315 aa6.82□□□□□ -1.32
CCDC47-207ENST00000612558 IGHV3OR16-13A0A075B7E8 117 aa6.81□□□□□ -1.32
CCDC47-207ENST00000612558 IGHV3-49A0A0A0MS15 119 aa6.81□□□□□ -1.32
CCDC47-207ENST00000612558 IGHV3-74A0A0B4J1X5 117 aa6.81□□□□□ -1.32
CCDC47-207ENST00000612558 TRAV34A0A0B4J273 112 aa6.81□□□□□ -1.32
CCDC47-207ENST00000612558 H7BYZ3 331 aa6.81□□□□□ -1.32
CCDC47-207ENST00000612558 K7EMT4 169 aa6.81□□□□□ -1.32
CCDC47-207ENST00000612558 K7EN84 100 aa6.81□□□□□ -1.32
CCDC47-207ENST00000612558 K7EQM0 130 aa6.81□□□□□ -1.32
CCDC47-207ENST00000612558 ISLRO14498 428 aa6.81□□□□□ -1.32
CCDC47-207ENST00000612558 IGLV2-8P01709 118 aa6.81□□□□□ -1.32
CCDC47-207ENST00000612558 CSN1S1P47710 185 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms