RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 PAQR4Q8N4S7 273 aaPredicted RBP7.91□□□□□ -1.14
CSMD1-217ENST00000602723 IGLV3-32A0A0A0MS00 114 aa7.9□□□□□ -1.14
CSMD1-217ENST00000602723 TRGV1A0A0A0MS02 117 aa7.9□□□□□ -1.14
CSMD1-217ENST00000602723 SH2D1AO60880 128 aa7.9□□□□□ -1.14
CSMD1-217ENST00000602723 TRAV41A0A0B4J266 112 aa7.9□□□□□ -1.14
CSMD1-217ENST00000602723 NDUFS6O75380 124 aaKnown RBP7.9□□□□□ -1.14
CSMD1-217ENST00000602723 Q8TAT8 98 aa7.9□□□□□ -1.14
CSMD1-217ENST00000602723 MRPL27Q9P0M9 148 aaKnown RBP7.9□□□□□ -1.14
CSMD1-217ENST00000602723 ZNF883P0CG24 379 aa7.9□□□□□ -1.14
CSMD1-217ENST00000602723 MYMXA0A1B0GTQ4 84 aa7.9□□□□□ -1.14
CSMD1-217ENST00000602723 DNAJC30Q96LL9 226 aa7.9□□□□□ -1.14
CSMD1-217ENST00000602723 A0A1W2PR77 199 aa7.9□□□□□ -1.15
CSMD1-217ENST00000602723 SELLP14151 372 aa7.9□□□□□ -1.15
CSMD1-217ENST00000602723 PSG3Q16557 428 aa7.9□□□□□ -1.15
CSMD1-217ENST00000602723 TNRC6BQ9UPQ9 1833 aaKnown RBP7.9□□□□□ -1.15
CSMD1-217ENST00000602723 TCRAP04437 139 aa7.9□□□□□ -1.15
CSMD1-217ENST00000602723 ZNF138P52744 262 aa7.9□□□□□ -1.15
CSMD1-217ENST00000602723 C14orf178Q8N769 122 aaPredicted RBP7.9□□□□□ -1.15
CSMD1-217ENST00000602723 C1orf159Q96HA4 380 aa7.9□□□□□ -1.15
CSMD1-217ENST00000602723 CHAC1Q9BUX1 264 aa7.9□□□□□ -1.15
CSMD1-217ENST00000602723 LY96Q9Y6Y9 160 aa7.9□□□□□ -1.15
CSMD1-217ENST00000602723 IGHV2-26A0A0B4J1V2 119 aa7.9□□□□□ -1.15
CSMD1-217ENST00000602723 ZNF625Q96I27 306 aaPredicted RBP7.9□□□□□ -1.15
CSMD1-217ENST00000602723 C3orf79P0CE67 100 aa7.89□□□□□ -1.15
CSMD1-217ENST00000602723 RPP25LQ8N5L8 163 aaKnown RBP7.89□□□□□ -1.15
CSMD1-217ENST00000602723 TMEM158Q8WZ71 300 aa7.89□□□□□ -1.15
CSMD1-217ENST00000602723 TANC1Q9C0D5 1861 aa7.89□□□□□ -1.15
CSMD1-217ENST00000602723 TRBV7-1A0A0A6YYK4 115 aa7.89□□□□□ -1.15
CSMD1-217ENST00000602723 HOXD3P31249 432 aaPredicted RBP7.89□□□□□ -1.15
CSMD1-217ENST00000602723 CDKN1AP38936 164 aa7.89□□□□□ -1.15
CSMD1-217ENST00000602723 NMSQ5H8A3 153 aa7.89□□□□□ -1.15
CSMD1-217ENST00000602723 SPSB3Q6PJ21 355 aa7.89□□□□□ -1.15
CSMD1-217ENST00000602723 DEFB104AQ8WTQ1 72 aa7.89□□□□□ -1.15
CSMD1-217ENST00000602723 SPANXA1Q9NS26 97 aa7.89□□□□□ -1.15
CSMD1-217ENST00000602723 PYY3Q5JQD4 70 aa7.89□□□□□ -1.15
CSMD1-217ENST00000602723 TMEM219Q86XT9 240 aa7.89□□□□□ -1.15
CSMD1-217ENST00000602723 TNFRSF14Q92956 283 aa7.89□□□□□ -1.15
CSMD1-217ENST00000602723 LCNL1Q6ZST4 164 aa7.89□□□□□ -1.15
CSMD1-217ENST00000602723 C9JAW5 83 aa7.88□□□□□ -1.15
CSMD1-217ENST00000602723 C3orf36Q3SXR2 165 aa7.88□□□□□ -1.15
CSMD1-217ENST00000602723 SSC4DQ8WTU2 575 aa7.88□□□□□ -1.15
CSMD1-217ENST00000602723 COLQQ9Y215 455 aaPredicted RBP7.88□□□□□ -1.15
CSMD1-217ENST00000602723 ZNF876PQ49A33 203 aa7.88□□□□□ -1.15
CSMD1-217ENST00000602723 SUMO4Q6EEV6 95 aa7.88□□□□□ -1.15
CSMD1-217ENST00000602723 PTPRBP23467 1997 aa7.88□□□□□ -1.15
CSMD1-217ENST00000602723 UBE2DNLQ8IWF7 75 aa7.88□□□□□ -1.15
CSMD1-217ENST00000602723 CYTL1Q9NRR1 136 aa7.88□□□□□ -1.15
CSMD1-217ENST00000602723 TRAV40A0A0B4J280 105 aa7.88□□□□□ -1.15
CSMD1-217ENST00000602723 SMKR1H3BMG3 65 aa7.88□□□□□ -1.15
CSMD1-217ENST00000602723 ZCCHC24Q8N2G6 241 aaKnown RBP7.88□□□□□ -1.15
CSMD1-217ENST00000602723 FN1P02751 2386 aaKnown RBP7.88□□□□□ -1.15
CSMD1-217ENST00000602723 NSUN5P1Q3KNT7 163 aa7.88□□□□□ -1.15
CSMD1-217ENST00000602723 RPL36AP83881 106 aaKnown RBP7.88□□□□□ -1.15
CSMD1-217ENST00000602723 ZC2HC1BQ5TFG8 222 aa7.88□□□□□ -1.15
CSMD1-217ENST00000602723 RPL36ALQ969Q0 106 aaKnown RBP7.88□□□□□ -1.15
CSMD1-217ENST00000602723 C10orf55Q5SWW7 151 aa7.88□□□□□ -1.15
CSMD1-217ENST00000602723 C9orf153Q5TBE3 101 aa7.88□□□□□ -1.15
CSMD1-217ENST00000602723 IGKV1-27A0A075B6S5 117 aa7.88□□□□□ -1.15
CSMD1-217ENST00000602723 TMEM14EPQ6UXP3 125 aa7.88□□□□□ -1.15
CSMD1-217ENST00000602723 LHFPL1Q86WI0 220 aa7.88□□□□□ -1.15
CSMD1-217ENST00000602723 H3BMM0 161 aa7.87□□□□□ -1.15
CSMD1-217ENST00000602723 UBE2WQ96B02 151 aa7.87□□□□□ -1.15
CSMD1-217ENST00000602723 SPRR3Q9UBC9 169 aa7.87□□□□□ -1.15
CSMD1-217ENST00000602723 NEUROG3Q9Y4Z2 214 aa7.87□□□□□ -1.15
CSMD1-217ENST00000602723 MLNRO43193 412 aa7.87□□□□□ -1.15
CSMD1-217ENST00000602723 RSPO3Q9BXY4 272 aaPredicted RBP7.87□□□□□ -1.15
CSMD1-217ENST00000602723 IGHV1-46P01743 117 aa7.87□□□□□ -1.15
CSMD1-217ENST00000602723 LYPD3O95274 346 aa7.87□□□□□ -1.15
CSMD1-217ENST00000602723 IGKV1-5P01602 117 aa7.87□□□□□ -1.15
CSMD1-217ENST00000602723 INAFM2P0DMQ5 153 aa7.87□□□□□ -1.15
CSMD1-217ENST00000602723 A0A1B0GWJ7 208 aa7.87□□□□□ -1.15
CSMD1-217ENST00000602723 VMO1Q7Z5L0 202 aa7.87□□□□□ -1.15
CSMD1-217ENST00000602723 ZNF329Q86UD4 541 aa7.87□□□□□ -1.15
CSMD1-217ENST00000602723 LYNX1G3V0Z9 82 aa7.87□□□□□ -1.15
CSMD1-217ENST00000602723 LYNX1P0DP58 116 aa7.87□□□□□ -1.15
CSMD1-217ENST00000602723 ZNF664Q8N3J9 261 aa7.86□□□□□ -1.15
CSMD1-217ENST00000602723 A0A087WWL8 130 aa7.86□□□□□ -1.15
CSMD1-217ENST00000602723 IGHV1-18A0A0C4DH31 117 aa7.86□□□□□ -1.15
CSMD1-217ENST00000602723 C6orf226Q5I0X4 101 aa7.86□□□□□ -1.15
CSMD1-217ENST00000602723 CD5LO43866 347 aa7.86□□□□□ -1.15
CSMD1-217ENST00000602723 LILRA1O75019 489 aa7.86□□□□□ -1.15
CSMD1-217ENST00000602723 ANAPC10Q9UM13 185 aa7.86□□□□□ -1.15
CSMD1-217ENST00000602723 SAP30O75446 220 aa7.86□□□□□ -1.15
CSMD1-217ENST00000602723 CRYGSP22914 178 aa7.86□□□□□ -1.15
CSMD1-217ENST00000602723 NDPQ00604 133 aa7.86□□□□□ -1.15
CSMD1-217ENST00000602723 PRIMA1Q86XR5 153 aa7.86□□□□□ -1.15
CSMD1-217ENST00000602723 NABP1Q96AH0 204 aa7.86□□□□□ -1.15
CSMD1-217ENST00000602723 TRAV3A0A0B4J244 114 aa7.86□□□□□ -1.15
CSMD1-217ENST00000602723 IGKV1-12A0A0C4DH73 117 aa7.86□□□□□ -1.15
CSMD1-217ENST00000602723 IGKV1D-12P01611 117 aa7.86□□□□□ -1.15
CSMD1-217ENST00000602723 CMC4P56277 68 aaPredicted RBP7.86□□□□□ -1.15
CSMD1-217ENST00000602723 SRRM5B3KS81 715 aa7.86□□□□□ -1.15
CSMD1-217ENST00000602723 IGHV1-8P0DP01 117 aa7.86□□□□□ -1.15
CSMD1-217ENST00000602723 FCN3O75636 299 aa7.86□□□□□ -1.15
CSMD1-217ENST00000602723 AMN1Q8IY45 258 aa7.86□□□□□ -1.15
CSMD1-217ENST00000602723 BMPERQ8N8U9 685 aa7.86□□□□□ -1.15
CSMD1-217ENST00000602723 GFRA4Q9GZZ7 299 aa7.86□□□□□ -1.15
CSMD1-217ENST00000602723 RPUSD1Q9UJJ7 312 aaKnown RBP7.86□□□□□ -1.15
CSMD1-217ENST00000602723 IGLV3-12A0A075B6K2 115 aa7.86□□□□□ -1.15
CSMD1-217ENST00000602723 IGHV1-3A0A0C4DH29 117 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 132.9 ms