RNA–Protein interactions for RNA: ENST00000591650.1

AP3D1-211, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 1 (best)

Gene AP3D1, Length 1,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-211ENST00000591650 STAG3L2P0CL84 134 aa12.88□□□□□ -0.35
AP3D1-211ENST00000591650 STAG3L3P0CL85 134 aa12.88□□□□□ -0.35
AP3D1-211ENST00000591650 ARL14EPLP0DKL9 152 aa12.88□□□□□ -0.35
AP3D1-211ENST00000591650 UBE2L3P68036 154 aaKnown RBP12.88□□□□□ -0.35
AP3D1-211ENST00000591650 FAM74A1Q5RGS3 127 aa12.88□□□□□ -0.35
AP3D1-211ENST00000591650 GTSCR1Q86UQ5 136 aa12.88□□□□□ -0.35
AP3D1-211ENST00000591650 FXYD5Q96DB9 178 aa12.88□□□□□ -0.35
AP3D1-211ENST00000591650 OR51M1Q9H341 326 aa12.88□□□□□ -0.35
AP3D1-211ENST00000591650 HRH4Q9H3N8 390 aa12.88□□□□□ -0.35
AP3D1-211ENST00000591650 MAP6D1Q9H9H5 199 aa12.88□□□□□ -0.35
AP3D1-211ENST00000591650 TRAV8-2A0A0B4J237 113 aa12.88□□□□□ -0.35
AP3D1-211ENST00000591650 UMAD1C9J7I0 102 aa12.88□□□□□ -0.35
AP3D1-211ENST00000591650 MEOX2P50222 304 aa12.88□□□□□ -0.35
AP3D1-211ENST00000591650 IGFL4Q6B9Z1 124 aa12.88□□□□□ -0.35
AP3D1-211ENST00000591650 LCN15Q6UWW0 184 aa12.88□□□□□ -0.35
AP3D1-211ENST00000591650 ALKAL2Q6UX46 152 aa12.88□□□□□ -0.35
AP3D1-211ENST00000591650 Q8N1Y9 231 aa12.88□□□□□ -0.35
AP3D1-211ENST00000591650 FAM213BQ8TBF2 198 aa12.88□□□□□ -0.35
AP3D1-211ENST00000591650 C19orf73Q9NVV2 129 aa12.88□□□□□ -0.35
AP3D1-211ENST00000591650 HIST1H1EP10412 219 aaKnown RBP12.87□□□□□ -0.35
AP3D1-211ENST00000591650 DEFA6Q01524 100 aa12.87□□□□□ -0.35
AP3D1-211ENST00000591650 EIF5AL1Q6IS14 154 aaKnown RBP12.87□□□□□ -0.35
AP3D1-211ENST00000591650 BLNKQ8WV28 456 aa12.87□□□□□ -0.35
AP3D1-211ENST00000591650 C16orf92Q96LL3 132 aa12.87□□□□□ -0.35
AP3D1-211ENST00000591650 C20orf173Q96LM9 149 aa12.87□□□□□ -0.35
AP3D1-211ENST00000591650 TRBV19A0A075B6N1 114 aa12.86□□□□□ -0.35
AP3D1-211ENST00000591650 MAP1LC3B2A6NCE7 125 aa12.86□□□□□ -0.35
AP3D1-211ENST00000591650 ISLRO14498 428 aa12.86□□□□□ -0.35
AP3D1-211ENST00000591650 HLA-DMBP28068 263 aa12.86□□□□□ -0.35
AP3D1-211ENST00000591650 PSMB3P49720 205 aa12.86□□□□□ -0.35
AP3D1-211ENST00000591650 ZNF124Q15973 351 aa12.86□□□□□ -0.35
AP3D1-211ENST00000591650 PSMG4Q5JS54 123 aa12.86□□□□□ -0.35
AP3D1-211ENST00000591650 PQLC2Q6ZP29 291 aa12.86□□□□□ -0.35
AP3D1-211ENST00000591650 RNF182Q8N6D2 247 aa12.86□□□□□ -0.35
AP3D1-211ENST00000591650 RNF141Q8WVD5 230 aa12.86□□□□□ -0.35
AP3D1-211ENST00000591650 PHYHIPLQ96FC7 376 aa12.86□□□□□ -0.35
AP3D1-211ENST00000591650 MAP1LC3BQ9GZQ8 125 aa12.86□□□□□ -0.35
AP3D1-211ENST00000591650 OR11H12B2RN74 326 aa12.85□□□□□ -0.35
AP3D1-211ENST00000591650 K7EIL1 84 aa12.85□□□□□ -0.35
AP3D1-211ENST00000591650 NDUFB4O95168 129 aa12.85□□□□□ -0.35
AP3D1-211ENST00000591650 SULT1A2P50226 295 aa12.85□□□□□ -0.35
AP3D1-211ENST00000591650 FGF8P55075 233 aaPredicted RBP12.85□□□□□ -0.35
AP3D1-211ENST00000591650 DEFB131AP59861 70 aa12.85□□□□□ -0.35
AP3D1-211ENST00000591650 APRG1Q8IVJ8 170 aa12.85□□□□□ -0.35
AP3D1-211ENST00000591650 SAT2Q96F10 170 aaPredicted RBP12.85□□□□□ -0.35
AP3D1-211ENST00000591650 ZNF331Q9NQX6 463 aaPredicted RBP12.85□□□□□ -0.35
AP3D1-211ENST00000591650 AGRNO00468 2067 aa12.84□□□□□ -0.35
AP3D1-211ENST00000591650 GCHFRP30047 84 aa12.84□□□□□ -0.35
AP3D1-211ENST00000591650 DEFB1P60022 68 aa12.84□□□□□ -0.35
AP3D1-211ENST00000591650 SNRPD3P62318 126 aaKnown RBP12.84□□□□□ -0.35
AP3D1-211ENST00000591650 GUK1Q16774 197 aa12.84□□□□□ -0.35
AP3D1-211ENST00000591650 SAMD13Q5VXD3 122 aa12.84□□□□□ -0.35
AP3D1-211ENST00000591650 DPPA3Q6W0C5 159 aa12.84□□□□□ -0.35
AP3D1-211ENST00000591650 DEFB125Q8N687 156 aa12.84□□□□□ -0.35
AP3D1-211ENST00000591650 SLC50A1Q9BRV3 221 aa12.84□□□□□ -0.35
AP3D1-211ENST00000591650 ZNF253O75346 499 aa12.83□□□□□ -0.36
AP3D1-211ENST00000591650 CXorf1O96002 111 aa12.83□□□□□ -0.36
AP3D1-211ENST00000591650 NBEAP1P0C6P0 100 aa12.83□□□□□ -0.36
AP3D1-211ENST00000591650 PRB4P10163 310 aaPredicted RBP12.83□□□□□ -0.36
AP3D1-211ENST00000591650 ID1P41134 155 aa12.83□□□□□ -0.36
AP3D1-211ENST00000591650 PDE6HQ13956 83 aa12.83□□□□□ -0.36
AP3D1-211ENST00000591650 IQCF2Q8IXL9 164 aa12.83□□□□□ -0.36
AP3D1-211ENST00000591650 LRRC20Q8TCA0 184 aa12.83□□□□□ -0.36
AP3D1-211ENST00000591650 LINC00052Q96N35 136 aa12.83□□□□□ -0.36
AP3D1-211ENST00000591650 CITED4Q96RK1 184 aa12.83□□□□□ -0.36
AP3D1-211ENST00000591650 FAM110AQ9BQ89 295 aa12.83□□□□□ -0.36
AP3D1-211ENST00000591650 A0A1B0GV50 99 aa12.82□□□□□ -0.36
AP3D1-211ENST00000591650 RAB5CP51148 216 aa12.82□□□□□ -0.36
AP3D1-211ENST00000591650 TMPRSS5Q9H3S3 457 aa12.82□□□□□ -0.36
AP3D1-211ENST00000591650 PRKDCP78527 4128 aaKnown RBP12.81□□□□□ -0.36
AP3D1-211ENST00000591650 EXOC3-AS1Q8N2X6 119 aa12.81□□□□□ -0.36
AP3D1-211ENST00000591650 MBD3L1Q8WWY6 194 aa12.81□□□□□ -0.36
AP3D1-211ENST00000591650 KNCNA6PVL3 124 aa12.8□□□□□ -0.36
AP3D1-211ENST00000591650 IGHV4-30-4P0DP06 118 aa12.8□□□□□ -0.36
AP3D1-211ENST00000591650 SUN5Q8TC36 379 aa12.8□□□□□ -0.36
AP3D1-211ENST00000591650 SFT2D1Q8WV19 159 aa12.8□□□□□ -0.36
AP3D1-211ENST00000591650 SRD5A3Q9H8P0 318 aa12.8□□□□□ -0.36
AP3D1-211ENST00000591650 ZNF705EA8MWA4 302 aaPredicted RBP12.79□□□□□ -0.36
AP3D1-211ENST00000591650 F6UB75 175 aa12.79□□□□□ -0.36
AP3D1-211ENST00000591650 M0R3E3 92 aa12.79□□□□□ -0.36
AP3D1-211ENST00000591650 H2AFB1P0C5Y9 115 aa12.79□□□□□ -0.36
AP3D1-211ENST00000591650 PSG3Q16557 428 aa12.79□□□□□ -0.36
AP3D1-211ENST00000591650 GDF5OSQ5U4N7 250 aa12.79□□□□□ -0.36
AP3D1-211ENST00000591650 ZNF738Q8NE65 137 aa12.79□□□□□ -0.36
AP3D1-211ENST00000591650 Q9H3A6 140 aa12.79□□□□□ -0.36
AP3D1-211ENST00000591650 TMEM167BQ9NRX6 74 aa12.79□□□□□ -0.36
AP3D1-211ENST00000591650 ZNF705FA8MVS1 300 aaPredicted RBP12.79□□□□□ -0.36
AP3D1-211ENST00000591650 CMC4P56277 68 aaPredicted RBP12.79□□□□□ -0.36
AP3D1-211ENST00000591650 RANP62826 216 aaKnown RBP12.79□□□□□ -0.36
AP3D1-211ENST00000591650 PSG9Q00887 426 aa12.79□□□□□ -0.36
AP3D1-211ENST00000591650 ICAM4Q14773 271 aa12.79□□□□□ -0.36
AP3D1-211ENST00000591650 TEX261Q6UWH6 196 aa12.79□□□□□ -0.36
AP3D1-211ENST00000591650 PRAC2D3DTV9 90 aa12.78□□□□□ -0.36
AP3D1-211ENST00000591650 ACTL10Q5JWF8 245 aa12.78□□□□□ -0.36
AP3D1-211ENST00000591650 UBE2G2P60604 165 aa12.77□□□□□ -0.37
AP3D1-211ENST00000591650 FOXI2Q6ZQN5 318 aa12.77□□□□□ -0.37
AP3D1-211ENST00000591650 ZNF680Q8NEM1 530 aa12.77□□□□□ -0.37
AP3D1-211ENST00000591650 MRAPQ8TCY5 172 aa12.77□□□□□ -0.37
AP3D1-211ENST00000591650 RPUSD4Q96CM3 377 aaKnown RBP12.77□□□□□ -0.37
AP3D1-211ENST00000591650 SAV1Q9H4B6 383 aaPredicted RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms