RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 LOC102724200A0A096LPH7 203 aaPredicted RBP10.32□□□□□ -0.76
TRAF4-215ENST00000584944 SNRPCP09234 159 aaKnown RBP10.32□□□□□ -0.76
TRAF4-215ENST00000584944 CDC34P49427 236 aaPredicted RBP10.32□□□□□ -0.76
TRAF4-215ENST00000584944 UBE2L3P68036 154 aaKnown RBP10.32□□□□□ -0.76
TRAF4-215ENST00000584944 ACTL10Q5JWF8 245 aa10.32□□□□□ -0.76
TRAF4-215ENST00000584944 MORN5Q5VZ52 161 aa10.32□□□□□ -0.76
TRAF4-215ENST00000584944 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.32□□□□□ -0.76
TRAF4-215ENST00000584944 IQCF2Q8IXL9 164 aa10.32□□□□□ -0.76
TRAF4-215ENST00000584944 ZNF738Q8NE65 137 aa10.32□□□□□ -0.76
TRAF4-215ENST00000584944 OR51M1Q9H341 326 aa10.32□□□□□ -0.76
TRAF4-215ENST00000584944 AAMDCQ9H7C9 122 aa10.32□□□□□ -0.76
TRAF4-215ENST00000584944 TMEM14CQ9P0S9 112 aa10.32□□□□□ -0.76
TRAF4-215ENST00000584944 A0A087X0K7 114 aa10.31□□□□□ -0.76
TRAF4-215ENST00000584944 H3BTX0 84 aa10.31□□□□□ -0.76
TRAF4-215ENST00000584944 OR10J4P0C629 311 aa10.31□□□□□ -0.76
TRAF4-215ENST00000584944 HIST1H1EP10412 219 aaKnown RBP10.31□□□□□ -0.76
TRAF4-215ENST00000584944 SPP1P10451 314 aa10.31□□□□□ -0.76
TRAF4-215ENST00000584944 RPL35AP18077 110 aaKnown RBP10.31□□□□□ -0.76
TRAF4-215ENST00000584944 PSG9Q00887 426 aa10.31□□□□□ -0.76
TRAF4-215ENST00000584944 FAM24BQ8N5W8 94 aa10.31□□□□□ -0.76
TRAF4-215ENST00000584944 B9D2Q9BPU9 175 aa10.31□□□□□ -0.76
TRAF4-215ENST00000584944 SLC25A2Q9BXI2 301 aa10.31□□□□□ -0.76
TRAF4-215ENST00000584944 PPP1R14DQ9NXH3 145 aa10.31□□□□□ -0.76
TRAF4-215ENST00000584944 RFNGQ9Y644 331 aa10.31□□□□□ -0.76
TRAF4-215ENST00000584944 A8MZ25 164 aa10.3□□□□□ -0.76
TRAF4-215ENST00000584944 PYYP10082 97 aa10.3□□□□□ -0.76
TRAF4-215ENST00000584944 NUTF2P61970 127 aaKnown RBP10.3□□□□□ -0.76
TRAF4-215ENST00000584944 SPATA31B1PQ5VZV4 182 aa10.3□□□□□ -0.76
TRAF4-215ENST00000584944 PQLC2Q6ZP29 291 aa10.3□□□□□ -0.76
TRAF4-215ENST00000584944 BAP18Q8IXM2 172 aa10.3□□□□□ -0.76
TRAF4-215ENST00000584944 RNF141Q8WVD5 230 aa10.3□□□□□ -0.76
TRAF4-215ENST00000584944 ZMAT4Q9H898 229 aa10.3□□□□□ -0.76
TRAF4-215ENST00000584944 CLEC5AQ9NY25 188 aa10.3□□□□□ -0.76
TRAF4-215ENST00000584944 KNCNA6PVL3 124 aa10.29□□□□□ -0.76
TRAF4-215ENST00000584944 UMAD1C9J7I0 102 aa10.29□□□□□ -0.76
TRAF4-215ENST00000584944 HMGB3O15347 200 aaKnown RBP10.29□□□□□ -0.76
TRAF4-215ENST00000584944 NBEAP1P0C6P0 100 aa10.29□□□□□ -0.76
TRAF4-215ENST00000584944 IGLC2P0DOY2 106 aa10.29□□□□□ -0.76
TRAF4-215ENST00000584944 CD300CQ08708 224 aa10.29□□□□□ -0.76
TRAF4-215ENST00000584944 PDE6HQ13956 83 aa10.29□□□□□ -0.76
TRAF4-215ENST00000584944 LGALSLQ3ZCW2 172 aaPredicted RBP10.29□□□□□ -0.76
TRAF4-215ENST00000584944 FAM74A1Q5RGS3 127 aa10.29□□□□□ -0.76
TRAF4-215ENST00000584944 RNF182Q8N6D2 247 aa10.29□□□□□ -0.76
TRAF4-215ENST00000584944 STOML3Q8TAV4 291 aa10.29□□□□□ -0.76
TRAF4-215ENST00000584944 RAB24Q969Q5 203 aa10.29□□□□□ -0.76
TRAF4-215ENST00000584944 WWC2-AS2Q96NR7 200 aa10.29□□□□□ -0.76
TRAF4-215ENST00000584944 ASCL2Q99929 193 aa10.29□□□□□ -0.76
TRAF4-215ENST00000584944 CYTL1Q9NRR1 136 aa10.29□□□□□ -0.76
TRAF4-215ENST00000584944 TRBV19A0A075B6N1 114 aa10.28□□□□□ -0.76
TRAF4-215ENST00000584944 H3BQ15 152 aa10.28□□□□□ -0.76
TRAF4-215ENST00000584944 CXorf1O96002 111 aa10.28□□□□□ -0.76
TRAF4-215ENST00000584944 SEC11BP0C7V7 166 aa10.28□□□□□ -0.76
TRAF4-215ENST00000584944 CSN1S1P47710 185 aa10.28□□□□□ -0.76
TRAF4-215ENST00000584944 ZNF124Q15973 351 aa10.28□□□□□ -0.76
TRAF4-215ENST00000584944 IGFL4Q6B9Z1 124 aa10.28□□□□□ -0.76
TRAF4-215ENST00000584944 FOXI2Q6ZQN5 318 aa10.28□□□□□ -0.76
TRAF4-215ENST00000584944 SLC51BQ86UW2 128 aa10.28□□□□□ -0.76
TRAF4-215ENST00000584944 OR4B1Q8NGF8 309 aa10.28□□□□□ -0.76
TRAF4-215ENST00000584944 ZNF331Q9NQX6 463 aaPredicted RBP10.28□□□□□ -0.76
TRAF4-215ENST00000584944 C19orf73Q9NVV2 129 aa10.28□□□□□ -0.76
TRAF4-215ENST00000584944 SOCS3O14543 225 aa10.27□□□□□ -0.77
TRAF4-215ENST00000584944 ZNF253O75346 499 aa10.27□□□□□ -0.77
TRAF4-215ENST00000584944 DUSP14O95147 198 aaKnown RBP10.27□□□□□ -0.77
TRAF4-215ENST00000584944 NHLRC4P0CG21 123 aaPredicted RBP10.27□□□□□ -0.77
TRAF4-215ENST00000584944 PSG3Q16557 428 aa10.27□□□□□ -0.77
TRAF4-215ENST00000584944 RPP25LQ8N5L8 163 aaKnown RBP10.27□□□□□ -0.77
TRAF4-215ENST00000584944 OR10J6PQ8NGY7 276 aa10.27□□□□□ -0.77
TRAF4-215ENST00000584944 FAM213BQ8TBF2 198 aa10.27□□□□□ -0.77
TRAF4-215ENST00000584944 TMED6Q8WW62 240 aa10.27□□□□□ -0.77
TRAF4-215ENST00000584944 RPUSD4Q96CM3 377 aaKnown RBP10.27□□□□□ -0.77
TRAF4-215ENST00000584944 FAM167A-AS1Q96KT0 104 aa10.27□□□□□ -0.77
TRAF4-215ENST00000584944 C17orf77Q96MU5 243 aa10.27□□□□□ -0.77
TRAF4-215ENST00000584944 ZNF586Q9NXT0 402 aa10.27□□□□□ -0.77
TRAF4-215ENST00000584944 KIR2DL5BA0A0G2JN68 375 aa10.26□□□□□ -0.77
TRAF4-215ENST00000584944 KIR2DL5BA0A0G2JPC4 375 aa10.26□□□□□ -0.77
TRAF4-215ENST00000584944 CTXND1A0A1B0GTU2 59 aa10.26□□□□□ -0.77
TRAF4-215ENST00000584944 RBMY1BA6NDE4 496 aaKnown RBP10.26□□□□□ -0.77
TRAF4-215ENST00000584944 RBMY1EA6NEQ0 496 aaKnown RBP10.26□□□□□ -0.77
TRAF4-215ENST00000584944 TEX46H3BTG2 121 aa10.26□□□□□ -0.77
TRAF4-215ENST00000584944 UBE2CO00762 179 aa10.26□□□□□ -0.77
TRAF4-215ENST00000584944 MRPS12O15235 138 aaKnown RBP10.26□□□□□ -0.77
TRAF4-215ENST00000584944 IGKV3-20P01619 116 aa10.26□□□□□ -0.77
TRAF4-215ENST00000584944 RBMY1DP0C7P1 496 aaKnown RBP10.26□□□□□ -0.77
TRAF4-215ENST00000584944 ARL14EPLP0DKL9 152 aa10.26□□□□□ -0.77
TRAF4-215ENST00000584944 RANP62826 216 aaKnown RBP10.26□□□□□ -0.77
TRAF4-215ENST00000584944 HIST1H1AQ02539 215 aaPredicted RBP10.26□□□□□ -0.77
TRAF4-215ENST00000584944 MORN3Q6PF18 240 aaPredicted RBP10.26□□□□□ -0.77
TRAF4-215ENST00000584944 KIR2DL5AQ8N109 375 aa10.26□□□□□ -0.77
TRAF4-215ENST00000584944 C9orf62Q8N4C0 152 aa10.26□□□□□ -0.77
TRAF4-215ENST00000584944 KIR2DL5BQ8NHK3 375 aa10.26□□□□□ -0.77
TRAF4-215ENST00000584944 CMTM2Q8TAZ6 248 aa10.26□□□□□ -0.77
TRAF4-215ENST00000584944 CSTL1Q9H114 145 aa10.26□□□□□ -0.77
TRAF4-215ENST00000584944 PRELID1Q9Y255 219 aa10.26□□□□□ -0.77
TRAF4-215ENST00000584944 SLC17A3O00476 420 aa10.25□□□□□ -0.77
TRAF4-215ENST00000584944 CA1P00915 261 aaPredicted RBP10.25□□□□□ -0.77
TRAF4-215ENST00000584944 HLA-DRB4P13762 266 aa10.25□□□□□ -0.77
TRAF4-215ENST00000584944 NKX2-5P52952 324 aaPredicted RBP10.25□□□□□ -0.77
TRAF4-215ENST00000584944 HAGHQ16775 308 aa10.25□□□□□ -0.77
TRAF4-215ENST00000584944 DPPA3Q6W0C5 159 aa10.25□□□□□ -0.77
TRAF4-215ENST00000584944 FXYD5Q96DB9 178 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms