RNA–Protein interactions for RNA: ENST00000578208.1

GGA3-204, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 3

Gene GGA3, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-204ENST00000578208 GOLT1BQ9Y3E0 138 aa8.45□□□□□ -1.06
GGA3-204ENST00000578208 IGHV3OR16-12A0A075B7B8 117 aa8.44□□□□□ -1.06
GGA3-204ENST00000578208 TRAV8-2A0A0B4J237 113 aa8.44□□□□□ -1.06
GGA3-204ENST00000578208 LCE6AA0A183 80 aa8.44□□□□□ -1.06
GGA3-204ENST00000578208 AMBPP02760 352 aa8.44□□□□□ -1.06
GGA3-204ENST00000578208 CXCL3P19876 107 aa8.44□□□□□ -1.06
GGA3-204ENST00000578208 PSG3Q16557 428 aa8.44□□□□□ -1.06
GGA3-204ENST00000578208 Q8NAQ8 132 aa8.44□□□□□ -1.06
GGA3-204ENST00000578208 CSNK1G2-AS1Q8NCQ2 148 aa8.44□□□□□ -1.06
GGA3-204ENST00000578208 THAP6Q8TBB0 222 aa8.44□□□□□ -1.06
GGA3-204ENST00000578208 C17orf77Q96MU5 243 aa8.44□□□□□ -1.06
GGA3-204ENST00000578208 MED28Q9H204 178 aa8.44□□□□□ -1.06
GGA3-204ENST00000578208 MBD2Q9UBB5 411 aa8.44□□□□□ -1.06
GGA3-204ENST00000578208 X6R8D5 127 aa8.44□□□□□ -1.06
GGA3-204ENST00000578208 IFNA5P01569 189 aa8.43□□□□□ -1.06
GGA3-204ENST00000578208 RPL12P30050 165 aaKnown RBP8.43□□□□□ -1.06
GGA3-204ENST00000578208 CNN1P51911 297 aaKnown RBP8.43□□□□□ -1.06
GGA3-204ENST00000578208 NANOS2P60321 138 aaKnown RBP8.43□□□□□ -1.06
GGA3-204ENST00000578208 RHOBP62745 196 aa8.43□□□□□ -1.06
GGA3-204ENST00000578208 HIST1H1AQ02539 215 aaPredicted RBP8.43□□□□□ -1.06
GGA3-204ENST00000578208 GUK1Q16774 197 aa8.43□□□□□ -1.06
GGA3-204ENST00000578208 CEMP1Q6PRD7 247 aaPredicted RBP8.43□□□□□ -1.06
GGA3-204ENST00000578208 PHLDA1Q8WV24 401 aaPredicted RBP8.43□□□□□ -1.06
GGA3-204ENST00000578208 ATP5SQ99766 215 aa8.43□□□□□ -1.06
GGA3-204ENST00000578208 TMEM208Q9BTX3 173 aa8.43□□□□□ -1.06
GGA3-204ENST00000578208 SLC35B3Q9H1N7 401 aa8.43□□□□□ -1.06
GGA3-204ENST00000578208 HSPB11Q9Y547 144 aa8.43□□□□□ -1.06
GGA3-204ENST00000578208 KMT2CQ8NEZ4 4911 aaKnown RBP8.43□□□□□ -1.06
GGA3-204ENST00000578208 AGRNO00468 2067 aa8.42□□□□□ -1.06
GGA3-204ENST00000578208 SMIM9A6NGZ8 99 aa8.42□□□□□ -1.06
GGA3-204ENST00000578208 H3BTX0 84 aa8.42□□□□□ -1.06
GGA3-204ENST00000578208 MRPS12O15235 138 aaKnown RBP8.42□□□□□ -1.06
GGA3-204ENST00000578208 INSP01308 110 aa8.42□□□□□ -1.06
GGA3-204ENST00000578208 SNRPCP09234 159 aaKnown RBP8.42□□□□□ -1.06
GGA3-204ENST00000578208 HLA-DMBP28068 263 aa8.42□□□□□ -1.06
GGA3-204ENST00000578208 RGS21Q2M5E4 152 aa8.42□□□□□ -1.06
GGA3-204ENST00000578208 MORN5Q5VZ52 161 aa8.42□□□□□ -1.06
GGA3-204ENST00000578208 OR8A1Q8NGG7 326 aa8.42□□□□□ -1.06
GGA3-204ENST00000578208 SCGB1C1Q8TD33 95 aa8.42□□□□□ -1.06
GGA3-204ENST00000578208 RPUSD4Q96CM3 377 aaKnown RBP8.42□□□□□ -1.06
GGA3-204ENST00000578208 NEU1Q99519 415 aa8.42□□□□□ -1.06
GGA3-204ENST00000578208 RNF126Q9BV68 326 aa8.42□□□□□ -1.06
GGA3-204ENST00000578208 WDR61Q9GZS3 305 aaKnown RBP8.42□□□□□ -1.06
GGA3-204ENST00000578208 HRH4Q9H3N8 390 aa8.42□□□□□ -1.06
GGA3-204ENST00000578208 ZNF331Q9NQX6 463 aaPredicted RBP8.42□□□□□ -1.06
GGA3-204ENST00000578208 TRAV5A0A0B4J249 113 aa8.41□□□□□ -1.06
GGA3-204ENST00000578208 TMEM189A5PLL7 270 aa8.41□□□□□ -1.06
GGA3-204ENST00000578208 BOLA2-SMG1P6H3BVE0 249 aa8.41□□□□□ -1.06
GGA3-204ENST00000578208 HBE1P02100 147 aa8.41□□□□□ -1.06
GGA3-204ENST00000578208 RBMY1A1P0DJD3 496 aaKnown RBP8.41□□□□□ -1.06
GGA3-204ENST00000578208 RBMY1CP0DJD4 496 aa8.41□□□□□ -1.06
GGA3-204ENST00000578208 IGLC2P0DOY2 106 aa8.41□□□□□ -1.06
GGA3-204ENST00000578208 RBMY1FQ15415 496 aaKnown RBP8.41□□□□□ -1.06
GGA3-204ENST00000578208 SPINK13Q1W4C9 94 aa8.41□□□□□ -1.06
GGA3-204ENST00000578208 ZNF705AQ6ZN79 300 aaPredicted RBP8.41□□□□□ -1.06
GGA3-204ENST00000578208 OR11H7Q8NGC8 314 aa8.41□□□□□ -1.06
GGA3-204ENST00000578208 OR10J6PQ8NGY7 276 aa8.41□□□□□ -1.06
GGA3-204ENST00000578208 IGF2BP2-AS1Q96M15 143 aa8.41□□□□□ -1.06
GGA3-204ENST00000578208 MRPL32Q9BYC8 188 aaKnown RBP8.41□□□□□ -1.06
GGA3-204ENST00000578208 SMIM3Q9BZL3 60 aa8.41□□□□□ -1.06
GGA3-204ENST00000578208 RFNGQ9Y644 331 aa8.41□□□□□ -1.06
GGA3-204ENST00000578208 A8MTW9 85 aa8.4□□□□□ -1.06
GGA3-204ENST00000578208 ZNF705FA8MVS1 300 aaPredicted RBP8.4□□□□□ -1.06
GGA3-204ENST00000578208 C11orf94C9JXX5 98 aa8.4□□□□□ -1.06
GGA3-204ENST00000578208 SLC17A3O00476 420 aa8.4□□□□□ -1.06
GGA3-204ENST00000578208 ZNF253O75346 499 aa8.4□□□□□ -1.06
GGA3-204ENST00000578208 ZNF705DP0CH99 300 aaPredicted RBP8.4□□□□□ -1.06
GGA3-204ENST00000578208 ZNF705BP0CI00 300 aaPredicted RBP8.4□□□□□ -1.06
GGA3-204ENST00000578208 FCN2Q15485 313 aa8.4□□□□□ -1.06
GGA3-204ENST00000578208 AMTNQ6UX39 209 aa8.4□□□□□ -1.06
GGA3-204ENST00000578208 ASB13Q8WXK3 278 aa8.4□□□□□ -1.06
GGA3-204ENST00000578208 TMEM14CQ9P0S9 112 aa8.4□□□□□ -1.06
GGA3-204ENST00000578208 TIMM9Q9Y5J7 89 aa8.4□□□□□ -1.06
GGA3-204ENST00000578208 STARD9Q9P2P6 4700 aa8.4□□□□□ -1.07
GGA3-204ENST00000578208 TEX48A0A1B0GUV7 120 aa8.39□□□□□ -1.07
GGA3-204ENST00000578208 H3BQ15 152 aa8.39□□□□□ -1.07
GGA3-204ENST00000578208 M0R2Z0 102 aa8.39□□□□□ -1.07
GGA3-204ENST00000578208 HIST1H1EP10412 219 aaKnown RBP8.39□□□□□ -1.07
GGA3-204ENST00000578208 PDE6HQ13956 83 aa8.39□□□□□ -1.07
GGA3-204ENST00000578208 RRN3P1Q2M238 152 aa8.39□□□□□ -1.07
GGA3-204ENST00000578208 GCSAMLQ5JQS6 135 aa8.39□□□□□ -1.07
GGA3-204ENST00000578208 FFAR4Q5NUL3 377 aa8.39□□□□□ -1.07
GGA3-204ENST00000578208 TRBV19A0A075B6N1 114 aa8.38□□□□□ -1.07
GGA3-204ENST00000578208 TRAV10A0A0B4J240 114 aa8.38□□□□□ -1.07
GGA3-204ENST00000578208 LOC102723971A0A1B0GUV8 181 aa8.38□□□□□ -1.07
GGA3-204ENST00000578208 GIPP09681 153 aaPredicted RBP8.38□□□□□ -1.07
GGA3-204ENST00000578208 EMP1P54849 157 aa8.38□□□□□ -1.07
GGA3-204ENST00000578208 BAP18Q8IXM2 172 aa8.38□□□□□ -1.07
GGA3-204ENST00000578208 C2CD4CQ8TF44 421 aa8.38□□□□□ -1.07
GGA3-204ENST00000578208 BLNKQ8WV28 456 aa8.38□□□□□ -1.07
GGA3-204ENST00000578208 SAT2Q96F10 170 aaPredicted RBP8.38□□□□□ -1.07
GGA3-204ENST00000578208 PARD6GQ9BYG4 376 aaPredicted RBP8.38□□□□□ -1.07
GGA3-204ENST00000578208 AAMDCQ9H7C9 122 aa8.38□□□□□ -1.07
GGA3-204ENST00000578208 ZNF586Q9NXT0 402 aa8.38□□□□□ -1.07
GGA3-204ENST00000578208 FUT9Q9Y231 359 aa8.38□□□□□ -1.07
GGA3-204ENST00000578208 PRELID1Q9Y255 219 aa8.38□□□□□ -1.07
GGA3-204ENST00000578208 DYNC2H1Q8NCM8 4307 aaKnown RBP8.38□□□□□ -1.07
GGA3-204ENST00000578208 OR7C2O60412 319 aa8.37□□□□□ -1.07
GGA3-204ENST00000578208 SPART-AS1P0CW21 52 aa8.37□□□□□ -1.07
GGA3-204ENST00000578208 PYYP10082 97 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms