RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 HIST1H1AQ02539 215 aaPredicted RBP12.78□□□□□ -0.36
CTDNEP1-207ENST00000572043 OPCMLQ14982 345 aa12.78□□□□□ -0.36
CTDNEP1-207ENST00000572043 C12orf74Q32Q52 190 aa12.78□□□□□ -0.36
CTDNEP1-207ENST00000572043 AMTNQ6UX39 209 aa12.78□□□□□ -0.36
CTDNEP1-207ENST00000572043 Q6ZRG5 221 aa12.78□□□□□ -0.36
CTDNEP1-207ENST00000572043 C1orf158Q8N1D5 194 aa12.78□□□□□ -0.36
CTDNEP1-207ENST00000572043 TRAV10A0A0B4J240 114 aa12.77□□□□□ -0.37
CTDNEP1-207ENST00000572043 TRAV5A0A0B4J249 113 aa12.77□□□□□ -0.37
CTDNEP1-207ENST00000572043 PRAF2O60831 178 aa12.77□□□□□ -0.37
CTDNEP1-207ENST00000572043 DEFA1P59665 94 aa12.77□□□□□ -0.37
CTDNEP1-207ENST00000572043 DEFA3P59666 94 aa12.77□□□□□ -0.37
CTDNEP1-207ENST00000572043 RHOBP62745 196 aa12.77□□□□□ -0.37
CTDNEP1-207ENST00000572043 PSG3Q16557 428 aa12.77□□□□□ -0.37
CTDNEP1-207ENST00000572043 VWC2Q2TAL6 325 aa12.77□□□□□ -0.37
CTDNEP1-207ENST00000572043 OR11H7Q8NGC8 314 aa12.77□□□□□ -0.37
CTDNEP1-207ENST00000572043 NEU1Q99519 415 aa12.77□□□□□ -0.37
CTDNEP1-207ENST00000572043 TMEM208Q9BTX3 173 aa12.77□□□□□ -0.37
CTDNEP1-207ENST00000572043 DNAJC4Q9NNZ3 241 aa12.77□□□□□ -0.37
CTDNEP1-207ENST00000572043 OR5AC2Q9NZP5 309 aa12.77□□□□□ -0.37
CTDNEP1-207ENST00000572043 RNF24Q9Y225 148 aa12.77□□□□□ -0.37
CTDNEP1-207ENST00000572043 DNAH1Q9P2D7 4330 aa12.77□□□□□ -0.37
CTDNEP1-207ENST00000572043 ALMS1Q8TCU4 4167 aa12.77□□□□□ -0.37
CTDNEP1-207ENST00000572043 B2MP61769 119 aa12.76□□□□□ -0.37
CTDNEP1-207ENST00000572043 PRR20EP86478 221 aa12.76□□□□□ -0.37
CTDNEP1-207ENST00000572043 PRR20CP86479 221 aa12.76□□□□□ -0.37
CTDNEP1-207ENST00000572043 PRR20DP86480 221 aa12.76□□□□□ -0.37
CTDNEP1-207ENST00000572043 PRR20BP86481 221 aa12.76□□□□□ -0.37
CTDNEP1-207ENST00000572043 PRR20AP86496 221 aa12.76□□□□□ -0.37
CTDNEP1-207ENST00000572043 NHLH2Q02577 135 aa12.76□□□□□ -0.37
CTDNEP1-207ENST00000572043 BPIFA4PQ86YQ2 179 aa12.76□□□□□ -0.37
CTDNEP1-207ENST00000572043 RFNGQ9Y644 331 aa12.76□□□□□ -0.37
CTDNEP1-207ENST00000572043 TRAV12-2A0A075B6T6 113 aa12.75□□□□□ -0.37
CTDNEP1-207ENST00000572043 SMIM9A6NGZ8 99 aa12.75□□□□□ -0.37
CTDNEP1-207ENST00000572043 A8MTW9 85 aa12.75□□□□□ -0.37
CTDNEP1-207ENST00000572043 SSNA1O43805 119 aa12.75□□□□□ -0.37
CTDNEP1-207ENST00000572043 HBE1P02100 147 aa12.75□□□□□ -0.37
CTDNEP1-207ENST00000572043 RLN2P04090 185 aa12.75□□□□□ -0.37
CTDNEP1-207ENST00000572043 PRM2P04554 102 aa12.75□□□□□ -0.37
CTDNEP1-207ENST00000572043 SPART-AS1P0CW21 52 aa12.75□□□□□ -0.37
CTDNEP1-207ENST00000572043 PLECQ15149 4684 aaKnown RBP12.75□□□□□ -0.37
CTDNEP1-207ENST00000572043 BAP18Q8IXM2 172 aa12.75□□□□□ -0.37
CTDNEP1-207ENST00000572043 RPP25LQ8N5L8 163 aaKnown RBP12.75□□□□□ -0.37
CTDNEP1-207ENST00000572043 OR8A1Q8NGG7 326 aa12.75□□□□□ -0.37
CTDNEP1-207ENST00000572043 OR1L4Q8NGR5 311 aa12.75□□□□□ -0.37
CTDNEP1-207ENST00000572043 THAP6Q8TBB0 222 aa12.75□□□□□ -0.37
CTDNEP1-207ENST00000572043 RPUSD4Q96CM3 377 aaKnown RBP12.75□□□□□ -0.37
CTDNEP1-207ENST00000572043 IGF2BP2-AS1Q96M15 143 aa12.75□□□□□ -0.37
CTDNEP1-207ENST00000572043 MARVELD1Q9BSK0 173 aa12.75□□□□□ -0.37
CTDNEP1-207ENST00000572043 NMES1Q9C002 83 aa12.75□□□□□ -0.37
CTDNEP1-207ENST00000572043 ZNF331Q9NQX6 463 aaPredicted RBP12.75□□□□□ -0.37
CTDNEP1-207ENST00000572043 BATF3Q9NR55 127 aa12.75□□□□□ -0.37
CTDNEP1-207ENST00000572043 SLC39A9Q9NUM3 307 aa12.75□□□□□ -0.37
CTDNEP1-207ENST00000572043 PPP1R14DQ9NXH3 145 aa12.75□□□□□ -0.37
CTDNEP1-207ENST00000572043 PLA2G2EQ9NZK7 142 aa12.75□□□□□ -0.37
CTDNEP1-207ENST00000572043 PXMP4Q9Y6I8 212 aa12.75□□□□□ -0.37
CTDNEP1-207ENST00000572043 DEFB131BA0A096LNP1 70 aa12.74□□□□□ -0.37
CTDNEP1-207ENST00000572043 LOC102723971A0A1B0GUV8 181 aa12.74□□□□□ -0.37
CTDNEP1-207ENST00000572043 H0YIZ8 118 aa12.74□□□□□ -0.37
CTDNEP1-207ENST00000572043 SLC17A3O00476 420 aa12.74□□□□□ -0.37
CTDNEP1-207ENST00000572043 CLINT1Q14677 625 aa12.74□□□□□ -0.37
CTDNEP1-207ENST00000572043 ATP6V1FQ16864 119 aa12.74□□□□□ -0.37
CTDNEP1-207ENST00000572043 LCN15Q6UWW0 184 aa12.74□□□□□ -0.37
CTDNEP1-207ENST00000572043 APLNQ9ULZ1 77 aa12.74□□□□□ -0.37
CTDNEP1-207ENST00000572043 TMEM189A5PLL7 270 aa12.73□□□□□ -0.37
CTDNEP1-207ENST00000572043 ZNF705GA8MUZ8 300 aaPredicted RBP12.73□□□□□ -0.37
CTDNEP1-207ENST00000572043 E5RGE8 158 aa12.73□□□□□ -0.37
CTDNEP1-207ENST00000572043 H3BQ15 152 aa12.73□□□□□ -0.37
CTDNEP1-207ENST00000572043 BOLA2-SMG1P6H3BVE0 249 aa12.73□□□□□ -0.37
CTDNEP1-207ENST00000572043 CRXO43186 299 aaPredicted RBP12.73□□□□□ -0.37
CTDNEP1-207ENST00000572043 INSP01308 110 aa12.73□□□□□ -0.37
CTDNEP1-207ENST00000572043 CXCL2P19875 107 aa12.73□□□□□ -0.37
CTDNEP1-207ENST00000572043 RPL29P47914 159 aaKnown RBP12.73□□□□□ -0.37
CTDNEP1-207ENST00000572043 H2BFSP57053 126 aa12.73□□□□□ -0.37
CTDNEP1-207ENST00000572043 RRN3P1Q2M238 152 aa12.73□□□□□ -0.37
CTDNEP1-207ENST00000572043 FAM222AQ5U5X8 452 aa12.73□□□□□ -0.37
CTDNEP1-207ENST00000572043 LGALS9CQ6DKI2 356 aa12.73□□□□□ -0.37
CTDNEP1-207ENST00000572043 OR5C1Q8NGR4 320 aa12.73□□□□□ -0.37
CTDNEP1-207ENST00000572043 PFDN5Q99471 154 aa12.73□□□□□ -0.37
CTDNEP1-207ENST00000572043 SLC50A1Q9BRV3 221 aa12.73□□□□□ -0.37
CTDNEP1-207ENST00000572043 SLC25A31Q9H0C2 315 aa12.73□□□□□ -0.37
CTDNEP1-207ENST00000572043 IGHV4-4A0A075B6R2 117 aa12.72□□□□□ -0.37
CTDNEP1-207ENST00000572043 AMBPP02760 352 aa12.72□□□□□ -0.37
CTDNEP1-207ENST00000572043 IGLC2P0DOY2 106 aa12.72□□□□□ -0.37
CTDNEP1-207ENST00000572043 GCSAMLQ5JQS6 135 aa12.72□□□□□ -0.37
CTDNEP1-207ENST00000572043 NPCDR1Q9BY65 106 aa12.72□□□□□ -0.37
CTDNEP1-207ENST00000572043 DKK2Q9UBU2 259 aa12.72□□□□□ -0.37
CTDNEP1-207ENST00000572043 YTHDF2Q9Y5A9 579 aaKnown RBP12.72□□□□□ -0.37
CTDNEP1-207ENST00000572043 PRAC2D3DTV9 90 aa12.71□□□□□ -0.37
CTDNEP1-207ENST00000572043 CYCSP99999 105 aaKnown RBP12.71□□□□□ -0.37
CTDNEP1-207ENST00000572043 PPP1R1CQ8WVI7 109 aa12.71□□□□□ -0.37
CTDNEP1-207ENST00000572043 HTN3P15516 51 aa12.7□□□□□ -0.38
CTDNEP1-207ENST00000572043 TCTAP57738 103 aa12.7□□□□□ -0.38
CTDNEP1-207ENST00000572043 PARD6GQ9BYG4 376 aaPredicted RBP12.7□□□□□ -0.38
CTDNEP1-207ENST00000572043 ZNF586Q9NXT0 402 aa12.7□□□□□ -0.38
CTDNEP1-207ENST00000572043 HTN1P15515 57 aa12.69□□□□□ -0.38
CTDNEP1-207ENST00000572043 CHAC2Q8WUX2 184 aa12.69□□□□□ -0.38
CTDNEP1-207ENST00000572043 SAT2Q96F10 170 aaPredicted RBP12.69□□□□□ -0.38
CTDNEP1-207ENST00000572043 LINC01587Q99440 93 aa12.69□□□□□ -0.38
CTDNEP1-207ENST00000572043 NIPSNAP3BQ9BS92 247 aa12.69□□□□□ -0.38
CTDNEP1-207ENST00000572043 MPDU1O75352 247 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms