RNA–Protein interactions for RNA: ENST00000571554.5

RAB40B-204, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB40B, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-204ENST00000571554 LRRC20Q8TCA0 184 aa9.81□□□□□ -0.84
RAB40B-204ENST00000571554 IGF2BP2-AS1Q96M15 143 aa9.81□□□□□ -0.84
RAB40B-204ENST00000571554 CRXO43186 299 aaPredicted RBP9.8□□□□□ -0.84
RAB40B-204ENST00000571554 DUSP14O95147 198 aaKnown RBP9.8□□□□□ -0.84
RAB40B-204ENST00000571554 CXCL3P19876 107 aa9.8□□□□□ -0.84
RAB40B-204ENST00000571554 RHOBP62745 196 aa9.8□□□□□ -0.84
RAB40B-204ENST00000571554 LINC00305Q7Z4B0 112 aa9.8□□□□□ -0.84
RAB40B-204ENST00000571554 NIPSNAP3BQ9BS92 247 aa9.8□□□□□ -0.84
RAB40B-204ENST00000571554 NDUFAF3Q9BU61 184 aa9.8□□□□□ -0.84
RAB40B-204ENST00000571554 A0A087X0K7 114 aa9.79□□□□□ -0.84
RAB40B-204ENST00000571554 FAM240BA0A1B0GVZ2 78 aa9.79□□□□□ -0.84
RAB40B-204ENST00000571554 MRPS12O15235 138 aaKnown RBP9.79□□□□□ -0.84
RAB40B-204ENST00000571554 COX7A2P2O60397 106 aa9.79□□□□□ -0.84
RAB40B-204ENST00000571554 INSP01308 110 aa9.79□□□□□ -0.84
RAB40B-204ENST00000571554 PSG3Q16557 428 aa9.79□□□□□ -0.84
RAB40B-204ENST00000571554 MIC13Q5XKP0 118 aa9.79□□□□□ -0.84
RAB40B-204ENST00000571554 TMEM37Q8WXS4 190 aa9.79□□□□□ -0.84
RAB40B-204ENST00000571554 C2orf50Q96LR7 162 aa9.79□□□□□ -0.84
RAB40B-204ENST00000571554 CCDC32Q9BV29 185 aa9.79□□□□□ -0.84
RAB40B-204ENST00000571554 C11orf1Q9H5F2 150 aa9.79□□□□□ -0.84
RAB40B-204ENST00000571554 BOLA2-SMG1P6H3BVE0 249 aa9.78□□□□□ -0.84
RAB40B-204ENST00000571554 SLC17A3O00476 420 aa9.78□□□□□ -0.84
RAB40B-204ENST00000571554 CAMLGP49069 296 aa9.78□□□□□ -0.84
RAB40B-204ENST00000571554 RAB32Q13637 225 aa9.78□□□□□ -0.84
RAB40B-204ENST00000571554 NRARPQ7Z6K4 114 aa9.78□□□□□ -0.84
RAB40B-204ENST00000571554 OR8A1Q8NGG7 326 aa9.78□□□□□ -0.84
RAB40B-204ENST00000571554 RPUSD4Q96CM3 377 aaKnown RBP9.78□□□□□ -0.84
RAB40B-204ENST00000571554 GGACTQ9BVM4 153 aa9.78□□□□□ -0.84
RAB40B-204ENST00000571554 PPP1R14DQ9NXH3 145 aa9.78□□□□□ -0.84
RAB40B-204ENST00000571554 TRAV5A0A0B4J249 113 aa9.77□□□□□ -0.85
RAB40B-204ENST00000571554 UBE2L5PA0A1B0GUS4 154 aa9.77□□□□□ -0.85
RAB40B-204ENST00000571554 IGSF23A1L1A6 192 aa9.77□□□□□ -0.85
RAB40B-204ENST00000571554 M0R2N4 97 aa9.77□□□□□ -0.85
RAB40B-204ENST00000571554 HTN1P15515 57 aa9.77□□□□□ -0.85
RAB40B-204ENST00000571554 AZU1P20160 251 aa9.77□□□□□ -0.85
RAB40B-204ENST00000571554 DAD1P61803 113 aa9.77□□□□□ -0.85
RAB40B-204ENST00000571554 OPCMLQ14982 345 aa9.77□□□□□ -0.85
RAB40B-204ENST00000571554 C10orf113Q5VZT2 155 aa9.77□□□□□ -0.85
RAB40B-204ENST00000571554 S100A7AQ86SG5 101 aa9.77□□□□□ -0.85
RAB40B-204ENST00000571554 PARD6GQ9BYG4 376 aaPredicted RBP9.77□□□□□ -0.85
RAB40B-204ENST00000571554 UQCC1Q9NVA1 299 aa9.77□□□□□ -0.85
RAB40B-204ENST00000571554 DNAH2Q9P225 4427 aa9.76□□□□□ -0.85
RAB40B-204ENST00000571554 PRAC2D3DTV9 90 aa9.76□□□□□ -0.85
RAB40B-204ENST00000571554 PVALBP20472 110 aaPredicted RBP9.76□□□□□ -0.85
RAB40B-204ENST00000571554 BAXQ07812 192 aa9.76□□□□□ -0.85
RAB40B-204ENST00000571554 FCN2Q15485 313 aa9.76□□□□□ -0.85
RAB40B-204ENST00000571554 PXDC1Q5TGL8 231 aa9.76□□□□□ -0.85
RAB40B-204ENST00000571554 MZT2BQ6NZ67 158 aa9.76□□□□□ -0.85
RAB40B-204ENST00000571554 LCN15Q6UWW0 184 aa9.76□□□□□ -0.85
RAB40B-204ENST00000571554 BPIFA4PQ86YQ2 179 aa9.76□□□□□ -0.85
RAB40B-204ENST00000571554 ZNF331Q9NQX6 463 aaPredicted RBP9.76□□□□□ -0.85
RAB40B-204ENST00000571554 HECTD4Q9Y4D8 3996 aa9.75□□□□□ -0.85
RAB40B-204ENST00000571554 TEX48A0A1B0GUV7 120 aa9.75□□□□□ -0.85
RAB40B-204ENST00000571554 H3BQ15 152 aa9.75□□□□□ -0.85
RAB40B-204ENST00000571554 SIX6O95475 246 aa9.75□□□□□ -0.85
RAB40B-204ENST00000571554 P0DMU3 169 aa9.75□□□□□ -0.85
RAB40B-204ENST00000571554 FAM231AP0DMU4 169 aa9.75□□□□□ -0.85
RAB40B-204ENST00000571554 FAM231CP0DMU5 169 aa9.75□□□□□ -0.85
RAB40B-204ENST00000571554 DEFB130BP0DP73 79 aa9.75□□□□□ -0.85
RAB40B-204ENST00000571554 DEFB130AP0DP74 79 aa9.75□□□□□ -0.85
RAB40B-204ENST00000571554 KIR3DS1Q14943 382 aa9.75□□□□□ -0.85
RAB40B-204ENST00000571554 TMEM88Q6PEY1 159 aa9.75□□□□□ -0.85
RAB40B-204ENST00000571554 UBE2DNLQ8IWF7 75 aa9.75□□□□□ -0.85
RAB40B-204ENST00000571554 TMEM252Q8N6L7 170 aa9.75□□□□□ -0.85
RAB40B-204ENST00000571554 POM121L12Q8N7R1 296 aa9.75□□□□□ -0.85
RAB40B-204ENST00000571554 LINC01587Q99440 93 aa9.75□□□□□ -0.85
RAB40B-204ENST00000571554 LYRM2Q9NU23 88 aaPredicted RBP9.75□□□□□ -0.85
RAB40B-204ENST00000571554 WDR83OSQ9Y284 106 aa9.75□□□□□ -0.85
RAB40B-204ENST00000571554 IGLV2-18A0A075B6J9 118 aa9.74□□□□□ -0.85
RAB40B-204ENST00000571554 J3KRW8 73 aa9.74□□□□□ -0.85
RAB40B-204ENST00000571554 FGF7P21781 194 aa9.74□□□□□ -0.85
RAB40B-204ENST00000571554 SULT1A1P50225 295 aa9.74□□□□□ -0.85
RAB40B-204ENST00000571554 IL15RAQ13261 267 aa9.74□□□□□ -0.85
RAB40B-204ENST00000571554 ASAH1Q13510 395 aa9.74□□□□□ -0.85
RAB40B-204ENST00000571554 RAB31Q13636 194 aa9.74□□□□□ -0.85
RAB40B-204ENST00000571554 Q6ZRG5 221 aa9.74□□□□□ -0.85
RAB40B-204ENST00000571554 ENKURQ8TC29 256 aa9.74□□□□□ -0.85
RAB40B-204ENST00000571554 S100ZQ8WXG8 99 aa9.74□□□□□ -0.85
RAB40B-204ENST00000571554 SLC50A1Q9BRV3 221 aa9.74□□□□□ -0.85
RAB40B-204ENST00000571554 GPN1Q9HCN4 374 aaPredicted RBP9.74□□□□□ -0.85
RAB40B-204ENST00000571554 DNAJC4Q9NNZ3 241 aa9.74□□□□□ -0.85
RAB40B-204ENST00000571554 FAT2Q9NYQ8 4349 aa9.73□□□□□ -0.85
RAB40B-204ENST00000571554 PLAC8L1A1L4L8 177 aa9.73□□□□□ -0.85
RAB40B-204ENST00000571554 IGLC2P0DOY2 106 aa9.73□□□□□ -0.85
RAB40B-204ENST00000571554 CXCL2P19875 107 aa9.73□□□□□ -0.85
RAB40B-204ENST00000571554 B2MP61769 119 aa9.73□□□□□ -0.85
RAB40B-204ENST00000571554 OXA1LQ15070 435 aa9.73□□□□□ -0.85
RAB40B-204ENST00000571554 VWC2Q2TAL6 325 aa9.73□□□□□ -0.85
RAB40B-204ENST00000571554 LRRC37A5PQ49AS3 106 aa9.73□□□□□ -0.85
RAB40B-204ENST00000571554 STX12Q86Y82 276 aa9.73□□□□□ -0.85
RAB40B-204ENST00000571554 SLC39A9Q9NUM3 307 aa9.73□□□□□ -0.85
RAB40B-204ENST00000571554 RNF24Q9Y225 148 aa9.73□□□□□ -0.85
RAB40B-204ENST00000571554 UPK1BO75841 260 aa9.72□□□□□ -0.85
RAB40B-204ENST00000571554 S100A11P31949 105 aa9.72□□□□□ -0.85
RAB40B-204ENST00000571554 CDKN1BP46527 198 aa9.72□□□□□ -0.85
RAB40B-204ENST00000571554 IFITM3Q01628 133 aa9.72□□□□□ -0.85
RAB40B-204ENST00000571554 GCSAMLQ5JQS6 135 aa9.72□□□□□ -0.85
RAB40B-204ENST00000571554 OR1L4Q8NGR5 311 aa9.72□□□□□ -0.85
RAB40B-204ENST00000571554 SAT2Q96F10 170 aaPredicted RBP9.72□□□□□ -0.85
RAB40B-204ENST00000571554 ZNF586Q9NXT0 402 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms