RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 GBGT1Q8N5D6 347 aa10.78□□□□□ -0.68
COMMD4-225ENST00000569245 UHRF2Q96PU4 802 aa10.78□□□□□ -0.68
COMMD4-225ENST00000569245 CITED4Q96RK1 184 aa10.78□□□□□ -0.68
COMMD4-225ENST00000569245 METTL26Q96S19 204 aa10.78□□□□□ -0.68
COMMD4-225ENST00000569245 SHANK2-AS3Q9BTD1 123 aa10.78□□□□□ -0.68
COMMD4-225ENST00000569245 SLC25A22Q9H936 323 aa10.78□□□□□ -0.68
COMMD4-225ENST00000569245 RNF24Q9Y225 148 aa10.78□□□□□ -0.68
COMMD4-225ENST00000569245 U3KQE9 123 aa10.78□□□□□ -0.68
COMMD4-225ENST00000569245 MAP1LC3B2A6NCE7 125 aa10.77□□□□□ -0.69
COMMD4-225ENST00000569245 H3BRN7 92 aa10.77□□□□□ -0.69
COMMD4-225ENST00000569245 APOHP02749 345 aaPredicted RBP10.77□□□□□ -0.69
COMMD4-225ENST00000569245 CRYBB3P26998 211 aa10.77□□□□□ -0.69
COMMD4-225ENST00000569245 TAS2R45P59539 299 aa10.77□□□□□ -0.69
COMMD4-225ENST00000569245 PAFAH1B2P68402 229 aa10.77□□□□□ -0.69
COMMD4-225ENST00000569245 LCN15Q6UWW0 184 aa10.77□□□□□ -0.69
COMMD4-225ENST00000569245 TCF24Q7RTU0 167 aa10.77□□□□□ -0.69
COMMD4-225ENST00000569245 SFT2D1Q8WV19 159 aa10.77□□□□□ -0.69
COMMD4-225ENST00000569245 PCNPQ8WW12 178 aaKnown RBP10.77□□□□□ -0.69
COMMD4-225ENST00000569245 FAM110AQ9BQ89 295 aa10.77□□□□□ -0.69
COMMD4-225ENST00000569245 MAP1LC3BQ9GZQ8 125 aa10.77□□□□□ -0.69
COMMD4-225ENST00000569245 PFDN2Q9UHV9 154 aa10.77□□□□□ -0.69
COMMD4-225ENST00000569245 ZNF98A6NK75 572 aa10.76□□□□□ -0.69
COMMD4-225ENST00000569245 TEX46H3BTG2 121 aa10.76□□□□□ -0.69
COMMD4-225ENST00000569245 HBE1P02100 147 aa10.76□□□□□ -0.69
COMMD4-225ENST00000569245 CD5P06127 495 aa10.76□□□□□ -0.69
COMMD4-225ENST00000569245 KHDC3LQ587J8 217 aa10.76□□□□□ -0.69
COMMD4-225ENST00000569245 MORN5Q5VZ52 161 aa10.76□□□□□ -0.69
COMMD4-225ENST00000569245 WFDC3Q8IUB2 231 aa10.76□□□□□ -0.69
COMMD4-225ENST00000569245 STXBP6Q8NFX7 210 aa10.76□□□□□ -0.69
COMMD4-225ENST00000569245 NARS2Q96I59 477 aaKnown RBP10.76□□□□□ -0.69
COMMD4-225ENST00000569245 FAM167A-AS1Q96KT0 104 aa10.76□□□□□ -0.69
COMMD4-225ENST00000569245 SCRT1Q9BWW7 348 aa10.76□□□□□ -0.69
COMMD4-225ENST00000569245 SLC25A2Q9BXI2 301 aa10.76□□□□□ -0.69
COMMD4-225ENST00000569245 TMEM231Q9H6L2 316 aa10.76□□□□□ -0.69
COMMD4-225ENST00000569245 KMT2CQ8NEZ4 4911 aaKnown RBP10.75□□□□□ -0.69
COMMD4-225ENST00000569245 TRAV5A0A0B4J249 113 aa10.75□□□□□ -0.69
COMMD4-225ENST00000569245 A0A1W2PS18 150 aa10.75□□□□□ -0.69
COMMD4-225ENST00000569245 DNASE2O00115 360 aaPredicted RBP10.75□□□□□ -0.69
COMMD4-225ENST00000569245 BUB3O43684 328 aa10.75□□□□□ -0.69
COMMD4-225ENST00000569245 CXorf1O96002 111 aa10.75□□□□□ -0.69
COMMD4-225ENST00000569245 CMC4P56277 68 aaPredicted RBP10.75□□□□□ -0.69
COMMD4-225ENST00000569245 C1orf194Q5T5A4 169 aa10.75□□□□□ -0.69
COMMD4-225ENST00000569245 PQLC2Q6ZP29 291 aa10.75□□□□□ -0.69
COMMD4-225ENST00000569245 TMEM14CQ9P0S9 112 aa10.75□□□□□ -0.69
COMMD4-225ENST00000569245 HMGB3O15347 200 aaKnown RBP10.74□□□□□ -0.69
COMMD4-225ENST00000569245 EIF3GO75821 320 aaKnown RBP eCLIP10.74□□□□□ -0.69
COMMD4-225ENST00000569245 RPL35AP18077 110 aaKnown RBP10.74□□□□□ -0.69
COMMD4-225ENST00000569245 APOC4P55056 127 aa10.74□□□□□ -0.69
COMMD4-225ENST00000569245 PMS2P11Q13670 270 aa10.74□□□□□ -0.69
COMMD4-225ENST00000569245 ODF3L2Q3SX64 289 aa10.74□□□□□ -0.69
COMMD4-225ENST00000569245 FAM90A2PQ658T7 463 aa10.74□□□□□ -0.69
COMMD4-225ENST00000569245 APRG1Q8IVJ8 170 aa10.74□□□□□ -0.69
COMMD4-225ENST00000569245 GRAMD2BQ96HH9 432 aa10.74□□□□□ -0.69
COMMD4-225ENST00000569245 HRH4Q9H3N8 390 aa10.74□□□□□ -0.69
COMMD4-225ENST00000569245 EDA2RQ9HAV5 297 aa10.74□□□□□ -0.69
COMMD4-225ENST00000569245 ARL14EPLP0DKL9 152 aa10.73□□□□□ -0.69
COMMD4-225ENST00000569245 PSMB3P49720 205 aa10.73□□□□□ -0.69
COMMD4-225ENST00000569245 FGF8P55075 233 aaPredicted RBP10.73□□□□□ -0.69
COMMD4-225ENST00000569245 LEMD1Q68G75 181 aa10.73□□□□□ -0.69
COMMD4-225ENST00000569245 ZFAND6Q6FIF0 208 aa10.73□□□□□ -0.69
COMMD4-225ENST00000569245 SUN5Q8TC36 379 aa10.73□□□□□ -0.69
COMMD4-225ENST00000569245 ZNF503Q96F45 646 aa10.73□□□□□ -0.69
COMMD4-225ENST00000569245 MS4A6AQ9H2W1 248 aa10.73□□□□□ -0.69
COMMD4-225ENST00000569245 OR51M1Q9H341 326 aa10.73□□□□□ -0.69
COMMD4-225ENST00000569245 MED9Q9NWA0 146 aa10.73□□□□□ -0.69
COMMD4-225ENST00000569245 DNAH7Q8WXX0 4024 aa10.73□□□□□ -0.69
COMMD4-225ENST00000569245 MRPS12O15235 138 aaKnown RBP10.72□□□□□ -0.69
COMMD4-225ENST00000569245 OR7C2O60412 319 aa10.72□□□□□ -0.69
COMMD4-225ENST00000569245 RPL7P18124 248 aaKnown RBP10.72□□□□□ -0.69
COMMD4-225ENST00000569245 GCHFRP30047 84 aa10.72□□□□□ -0.69
COMMD4-225ENST00000569245 CCL20P78556 96 aa10.72□□□□□ -0.69
COMMD4-225ENST00000569245 CASC10Q5T4H9 136 aa10.72□□□□□ -0.69
COMMD4-225ENST00000569245 C16orf54Q6UWD8 224 aa10.72□□□□□ -0.69
COMMD4-225ENST00000569245 BPIFA4PQ86YQ2 179 aa10.72□□□□□ -0.69
COMMD4-225ENST00000569245 OR8I2Q8N0Y5 310 aa10.72□□□□□ -0.69
COMMD4-225ENST00000569245 GPR82Q96P67 336 aa10.72□□□□□ -0.69
COMMD4-225ENST00000569245 PAXXQ9BUH6 204 aa10.72□□□□□ -0.69
COMMD4-225ENST00000569245 TMEM167BQ9NRX6 74 aa10.72□□□□□ -0.69
COMMD4-225ENST00000569245 A0A1B0GV50 99 aa10.71□□□□□ -0.69
COMMD4-225ENST00000569245 LINC00862A6NCI5 91 aa10.71□□□□□ -0.69
COMMD4-225ENST00000569245 PPT1P50897 306 aa10.71□□□□□ -0.69
COMMD4-225ENST00000569245 GLMPQ8WWB7 406 aa10.71□□□□□ -0.69
COMMD4-225ENST00000569245 FXYD5Q96DB9 178 aa10.71□□□□□ -0.69
COMMD4-225ENST00000569245 TMPRSS5Q9H3S3 457 aa10.71□□□□□ -0.69
COMMD4-225ENST00000569245 UBE2CO00762 179 aa10.7□□□□□ -0.7
COMMD4-225ENST00000569245 IGLC2P0DOY2 106 aa10.7□□□□□ -0.7
COMMD4-225ENST00000569245 PYYP10082 97 aa10.7□□□□□ -0.7
COMMD4-225ENST00000569245 HIST1H1EP10412 219 aaKnown RBP10.7□□□□□ -0.7
COMMD4-225ENST00000569245 UBE2L3P68036 154 aaKnown RBP10.7□□□□□ -0.7
COMMD4-225ENST00000569245 ZNF124Q15973 351 aa10.7□□□□□ -0.7
COMMD4-225ENST00000569245 MAP6D1Q9H9H5 199 aa10.7□□□□□ -0.7
COMMD4-225ENST00000569245 KIR2DL5BA0A0G2JN68 375 aa10.69□□□□□ -0.7
COMMD4-225ENST00000569245 KIR2DL5BA0A0G2JPC4 375 aa10.69□□□□□ -0.7
COMMD4-225ENST00000569245 SPRY2O43597 315 aa10.69□□□□□ -0.7
COMMD4-225ENST00000569245 OR10J4P0C629 311 aa10.69□□□□□ -0.7
COMMD4-225ENST00000569245 GALR1P47211 349 aa10.69□□□□□ -0.7
COMMD4-225ENST00000569245 DEFB131AP59861 70 aa10.69□□□□□ -0.7
COMMD4-225ENST00000569245 DEFB135Q30KP9 77 aa10.69□□□□□ -0.7
COMMD4-225ENST00000569245 Q6ZWC4 215 aa10.69□□□□□ -0.7
COMMD4-225ENST00000569245 KIR2DL5AQ8N109 375 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms