RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 OR4A4PQ8NGN8 299 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 OR9G4Q8NGQ1 327 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 LHFPL5Q8TAF8 219 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 MUC7Q8TAX7 377 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 TCTEX1D2Q8WW35 142 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 PHYHIPQ92561 330 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 SLC25A46Q96AG3 418 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 MRGPRFQ96AM1 343 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 PINX1Q96BK5 328 aaKnown RBP0.73□□□□□ -2.29
SMG1-212ENST00000566328 GPR146Q96CH1 333 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 DGCR14Q96DF8 476 aaKnown RBP0.73□□□□□ -2.29
SMG1-212ENST00000566328 YIPF6Q96EC8 236 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 S100A16Q96FQ6 103 aaKnown RBP0.73□□□□□ -2.29
SMG1-212ENST00000566328 MRPL48Q96GC5 212 aaKnown RBP0.73□□□□□ -2.29
SMG1-212ENST00000566328 AKR1E2Q96JD6 320 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 OR2A7Q96R45 310 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 TP53RKQ96S44 253 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 RNF2Q99496 336 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 CST11Q9H112 138 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 MIXL1Q9H2W2 232 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 PPDPFQ9H3Y8 114 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 NCOR1P1Q9H4R4 102 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 AUNIPQ9H7T9 357 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 EDA2RQ9HAV5 297 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 SPACA1Q9HBV2 294 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 ISYNA1Q9NPH2 558 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 C12orf4Q9NQ89 552 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 SLC2A9Q9NRM0 540 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 NDUFB11Q9NX14 153 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 RHBDL2Q9NX52 303 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 PIPOXQ9P0Z9 390 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 ABRACLQ9P1F3 81 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 ANXA10Q9UJ72 324 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 JPT1Q9UK76 154 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 SSR3Q9UNL2 185 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 FLVCR2Q9UPI3 526 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 RBMX2Q9Y388 322 aaKnown RBP0.73□□□□□ -2.29
SMG1-212ENST00000566328 TPRKBQ9Y3C4 175 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 AMMECR1Q9Y4X0 333 aaPredicted RBP0.73□□□□□ -2.29
SMG1-212ENST00000566328 OR51B2Q9Y5P1 312 aa0.73□□□□□ -2.29
SMG1-212ENST00000566328 TRAV12-2A0A075B6T6 113 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 A0A087WXM4 84 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 TRAV14DV4A0A0A6YYC5 116 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 TRAV5A0A0B4J249 113 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 SMIM31A0A1B0GVY4 71 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 IGLC7A0M8Q6 106 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 IRGMA1A4Y4 181 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 ZNF705GA8MUZ8 300 aaPredicted RBP0.72□□□□□ -2.29
SMG1-212ENST00000566328 ZNF705FA8MVS1 300 aaPredicted RBP0.72□□□□□ -2.29
SMG1-212ENST00000566328 C16orf90A8MZG2 172 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 FAM25AB3EWG3 89 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 FAM25CB3EWG5 89 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 FAM25GB3EWG6 89 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 IGLL5B9A064 214 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 F6UB75 175 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 H0Y980 276 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 I3L2K1 104 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 K7EIM0 57 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 DNASE2O00115 360 aaPredicted RBP0.72□□□□□ -2.29
SMG1-212ENST00000566328 ITGB1BP1O14713 200 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 PDCD5O14737 125 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 NUPL2O15504 423 aaKnown RBP0.72□□□□□ -2.29
SMG1-212ENST00000566328 RGS5O15539 181 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 GGCTO75223 188 aaKnown RBP0.72□□□□□ -2.29
SMG1-212ENST00000566328 ATP6V1G1O75348 118 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 CCNKO75909 580 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 ARL6IP5O75915 188 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 TMEM50AO95807 157 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 HPRT1P00492 218 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 IFNA17P01571 189 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 IGKV1-5P01602 117 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 APOA2P02652 100 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 SERPINE2P07093 398 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 CRYGCP07315 174 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 OR5AC1P0C628 307 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 ZNF688P0C7X2 276 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 ZNF735P0CB33 412 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 CHTF8P0CG12 524 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 UBBP0CG47 229 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 TRAPPC2P0DI81 140 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 TRAPPC2BP0DI82 140 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 RBMY1A1P0DJD3 496 aaKnown RBP0.72□□□□□ -2.29
SMG1-212ENST00000566328 RBMY1CP0DJD4 496 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 C8orf88P0DMB2 117 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 RRASP10301 218 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 HTN1P15515 57 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 HTN3P15516 51 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 NQO2P16083 231 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 AKR1C4P17516 323 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 NPPCP23582 126 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 MYL9P24844 172 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 F2RP25116 425 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 MAPK3P27361 379 aaPredicted RBP0.72□□□□□ -2.29
SMG1-212ENST00000566328 HLA-DMBP28068 263 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 CD40LGP29965 261 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 FGF9P31371 208 aaPredicted RBP0.72□□□□□ -2.29
SMG1-212ENST00000566328 PRSS3P35030 304 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 RPL27AP46776 148 aaKnown RBP0.72□□□□□ -2.29
SMG1-212ENST00000566328 RORCP51449 518 aa0.72□□□□□ -2.29
SMG1-212ENST00000566328 PIGPP57054 158 aa0.72□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms