RNA–Protein interactions for RNA: ENST00000566095.6

SF3B3-207, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-207ENST00000566095 C5orf17Q8NAS9 161 aa7.54□□□□□ -1.2
SF3B3-207ENST00000566095 SMIM7Q9BQ49 75 aa7.54□□□□□ -1.2
SF3B3-207ENST00000566095 KLF12Q9Y4X4 402 aa7.54□□□□□ -1.2
SF3B3-207ENST00000566095 U3KQE9 123 aa7.54□□□□□ -1.2
SF3B3-207ENST00000566095 A0A087X0K7 114 aa7.53□□□□□ -1.2
SF3B3-207ENST00000566095 IGHV3-35A0A0C4DH35 117 aa7.53□□□□□ -1.2
SF3B3-207ENST00000566095 IGHV7-4-1A0A0J9YVY3 117 aa7.53□□□□□ -1.2
SF3B3-207ENST00000566095 TRBV12-3P01733 135 aa7.53□□□□□ -1.2
SF3B3-207ENST00000566095 SYNJ2BPP57105 145 aa7.53□□□□□ -1.2
SF3B3-207ENST00000566095 PAFAH1B2P68402 229 aa7.53□□□□□ -1.2
SF3B3-207ENST00000566095 PSG9Q00887 426 aa7.53□□□□□ -1.2
SF3B3-207ENST00000566095 FHL3Q13643 280 aa7.53□□□□□ -1.2
SF3B3-207ENST00000566095 GUCA2BQ16661 112 aa7.53□□□□□ -1.2
SF3B3-207ENST00000566095 NSUN5P1Q3KNT7 163 aa7.53□□□□□ -1.2
SF3B3-207ENST00000566095 CST9LP1Q5W188 147 aa7.53□□□□□ -1.2
SF3B3-207ENST00000566095 SHISA2Q6UWI4 295 aa7.53□□□□□ -1.2
SF3B3-207ENST00000566095 C11orf44Q8N8P7 122 aa7.53□□□□□ -1.2
SF3B3-207ENST00000566095 ANAPC16Q96DE5 110 aa7.53□□□□□ -1.2
SF3B3-207ENST00000566095 IMMP2LQ96T52 175 aa7.53□□□□□ -1.2
SF3B3-207ENST00000566095 PARLQ9H300 379 aa7.53□□□□□ -1.2
SF3B3-207ENST00000566095 TMPRSS5Q9H3S3 457 aa7.53□□□□□ -1.2
SF3B3-207ENST00000566095 BIN3Q9NQY0 253 aa7.53□□□□□ -1.2
SF3B3-207ENST00000566095 OTORQ9NRC9 128 aa7.53□□□□□ -1.2
SF3B3-207ENST00000566095 C7orf77A4D0Y5 90 aa7.52□□□□□ -1.21
SF3B3-207ENST00000566095 ZNF785A8K8V0 405 aa7.52□□□□□ -1.21
SF3B3-207ENST00000566095 OVOL1O14753 267 aa7.52□□□□□ -1.21
SF3B3-207ENST00000566095 MRPS12O15235 138 aaKnown RBP7.52□□□□□ -1.21
SF3B3-207ENST00000566095 BUB3O43684 328 aa7.52□□□□□ -1.21
SF3B3-207ENST00000566095 MT-ND4LP03901 98 aa7.52□□□□□ -1.21
SF3B3-207ENST00000566095 IGLC2P0DOY2 106 aa7.52□□□□□ -1.21
SF3B3-207ENST00000566095 KRTAP24-1Q3LI83 254 aa7.52□□□□□ -1.21
SF3B3-207ENST00000566095 SPATA31B1PQ5VZV4 182 aa7.52□□□□□ -1.21
SF3B3-207ENST00000566095 C15orf54Q8N8G6 183 aa7.52□□□□□ -1.21
SF3B3-207ENST00000566095 OR9G4Q8NGQ1 327 aa7.52□□□□□ -1.21
SF3B3-207ENST00000566095 DYNLRB2Q8TF09 96 aa7.52□□□□□ -1.21
SF3B3-207ENST00000566095 C2CD4CQ8TF44 421 aa7.52□□□□□ -1.21
SF3B3-207ENST00000566095 MRPL53Q96EL3 112 aaKnown RBP7.52□□□□□ -1.21
SF3B3-207ENST00000566095 CITED1Q99966 193 aa7.52□□□□□ -1.21
SF3B3-207ENST00000566095 SLC50A1Q9BRV3 221 aa7.52□□□□□ -1.21
SF3B3-207ENST00000566095 MCRIP2Q9BUT9 160 aaKnown RBP7.52□□□□□ -1.21
SF3B3-207ENST00000566095 ZNF747Q9BV97 191 aa7.52□□□□□ -1.21
SF3B3-207ENST00000566095 GPR61Q9BZJ8 451 aa7.52□□□□□ -1.21
SF3B3-207ENST00000566095 AAMDCQ9H7C9 122 aa7.52□□□□□ -1.21
SF3B3-207ENST00000566095 JMJD1CQ15652 2540 aa7.51□□□□□ -1.21
SF3B3-207ENST00000566095 TRBV19A0A075B6N1 114 aa7.51□□□□□ -1.21
SF3B3-207ENST00000566095 TRAV9-1A0A075B6T8 112 aa7.51□□□□□ -1.21
SF3B3-207ENST00000566095 A0A1B0GV50 99 aa7.51□□□□□ -1.21
SF3B3-207ENST00000566095 K7EQM0 130 aa7.51□□□□□ -1.21
SF3B3-207ENST00000566095 OR10J4P0C629 311 aa7.51□□□□□ -1.21
SF3B3-207ENST00000566095 RNF212Q495C1 297 aa7.51□□□□□ -1.21
SF3B3-207ENST00000566095 C16orf54Q6UWD8 224 aa7.51□□□□□ -1.21
SF3B3-207ENST00000566095 SIGLEC15Q6ZMC9 328 aa7.51□□□□□ -1.21
SF3B3-207ENST00000566095 RAX2Q96IS3 184 aa7.51□□□□□ -1.21
SF3B3-207ENST00000566095 ATG101Q9BSB4 218 aa7.51□□□□□ -1.21
SF3B3-207ENST00000566095 RHPN1-AS1Q9BWJ2 59 aa7.51□□□□□ -1.21
SF3B3-207ENST00000566095 SIGLEC8Q9NYZ4 499 aa7.51□□□□□ -1.21
SF3B3-207ENST00000566095 SMPXQ9UHP9 88 aa7.51□□□□□ -1.21
SF3B3-207ENST00000566095 YTHDF2Q9Y5A9 579 aaKnown RBP7.51□□□□□ -1.21
SF3B3-207ENST00000566095 TRAV25A0A0B4J276 109 aa7.5□□□□□ -1.21
SF3B3-207ENST00000566095 C2orf70A6NJV1 201 aa7.5□□□□□ -1.21
SF3B3-207ENST00000566095 GGTLC3B5MD39 225 aa7.5□□□□□ -1.21
SF3B3-207ENST00000566095 NDUFB4O95168 129 aa7.5□□□□□ -1.21
SF3B3-207ENST00000566095 ID1P41134 155 aa7.5□□□□□ -1.21
SF3B3-207ENST00000566095 CSN1S1P47710 185 aa7.5□□□□□ -1.21
SF3B3-207ENST00000566095 INSL3P51460 131 aa7.5□□□□□ -1.21
SF3B3-207ENST00000566095 CNN1P51911 297 aaKnown RBP7.5□□□□□ -1.21
SF3B3-207ENST00000566095 SLURP1P55000 103 aa7.5□□□□□ -1.21
SF3B3-207ENST00000566095 RPL11P62913 178 aaKnown RBP7.5□□□□□ -1.21
SF3B3-207ENST00000566095 SUMO1P63165 101 aaKnown RBP7.5□□□□□ -1.21
SF3B3-207ENST00000566095 SRSF2Q01130 221 aaKnown RBP7.5□□□□□ -1.21
SF3B3-207ENST00000566095 TMEM183BQ1AE95 376 aa7.5□□□□□ -1.21
SF3B3-207ENST00000566095 DEFB136Q30KP8 78 aa7.5□□□□□ -1.21
SF3B3-207ENST00000566095 UNQ9165/PRO28630Q6UXU0 137 aa7.5□□□□□ -1.21
SF3B3-207ENST00000566095 OR2K2Q8NGT1 345 aa7.5□□□□□ -1.21
SF3B3-207ENST00000566095 CMTM2Q8TAZ6 248 aa7.5□□□□□ -1.21
SF3B3-207ENST00000566095 FMC1Q96HJ9 113 aa7.5□□□□□ -1.21
SF3B3-207ENST00000566095 EPDR1Q9UM22 224 aa7.5□□□□□ -1.21
SF3B3-207ENST00000566095 FBN3Q75N90 2809 aa7.5□□□□□ -1.21
SF3B3-207ENST00000566095 RBAKDNA6NC62 111 aa7.49□□□□□ -1.21
SF3B3-207ENST00000566095 M0R036 132 aa7.49□□□□□ -1.21
SF3B3-207ENST00000566095 DNASE2O00115 360 aaPredicted RBP7.49□□□□□ -1.21
SF3B3-207ENST00000566095 CHEK1O14757 476 aa7.49□□□□□ -1.21
SF3B3-207ENST00000566095 ZNF207O43670 478 aaKnown RBP7.49□□□□□ -1.21
SF3B3-207ENST00000566095 SLC25A5P05141 298 aaKnown RBP7.49□□□□□ -1.21
SF3B3-207ENST00000566095 CBLN1P23435 193 aa7.49□□□□□ -1.21
SF3B3-207ENST00000566095 ATP5G3P48201 142 aa7.49□□□□□ -1.21
SF3B3-207ENST00000566095 CMC4P56277 68 aaPredicted RBP7.49□□□□□ -1.21
SF3B3-207ENST00000566095 RIPPLY3P57055 190 aa7.49□□□□□ -1.21
SF3B3-207ENST00000566095 RPL19P84098 196 aaKnown RBP7.49□□□□□ -1.21
SF3B3-207ENST00000566095 TM4SF20Q53R12 229 aa7.49□□□□□ -1.21
SF3B3-207ENST00000566095 MORN5Q5VZ52 161 aa7.49□□□□□ -1.21
SF3B3-207ENST00000566095 RBPMS2Q6ZRY4 209 aaKnown RBP7.49□□□□□ -1.21
SF3B3-207ENST00000566095 COX8CQ7Z4L0 72 aa7.49□□□□□ -1.21
SF3B3-207ENST00000566095 LINC01551Q86U37 167 aa7.49□□□□□ -1.21
SF3B3-207ENST00000566095 PRIMA1Q86XR5 153 aa7.49□□□□□ -1.21
SF3B3-207ENST00000566095 GLMPQ8WWB7 406 aa7.49□□□□□ -1.21
SF3B3-207ENST00000566095 DLX4Q92988 240 aaPredicted RBP7.49□□□□□ -1.21
SF3B3-207ENST00000566095 ZNF414Q96IQ9 312 aa7.49□□□□□ -1.21
SF3B3-207ENST00000566095 NRN1Q9NPD7 142 aa7.49□□□□□ -1.21
SF3B3-207ENST00000566095 PPP1R14DQ9NXH3 145 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms