RNA–Protein interactions for RNA: ENST00000564628.1

NME3-207, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-207ENST00000564628 NPCDR1Q9BY65 106 aa13.88□□□□□ -0.19
NME3-207ENST00000564628 ZNF98A6NK75 572 aa13.87□□□□□ -0.19
NME3-207ENST00000564628 AGPAT2O15120 278 aa13.87□□□□□ -0.19
NME3-207ENST00000564628 MBP02144 154 aa13.87□□□□□ -0.19
NME3-207ENST00000564628 ORM2P19652 201 aa13.87□□□□□ -0.19
NME3-207ENST00000564628 OR1B1Q8NGR6 318 aa13.87□□□□□ -0.19
NME3-207ENST00000564628 H3BRN7 92 aa13.86□□□□□ -0.19
NME3-207ENST00000564628 ZNF688P0C7X2 276 aa13.86□□□□□ -0.19
NME3-207ENST00000564628 DEFB135Q30KP9 77 aa13.86□□□□□ -0.19
NME3-207ENST00000564628 AKR1C8PQ5T2L2 129 aa13.86□□□□□ -0.19
NME3-207ENST00000564628 RNF183Q96D59 192 aa13.86□□□□□ -0.19
NME3-207ENST00000564628 SOCS3O14543 225 aa13.85□□□□□ -0.19
NME3-207ENST00000564628 HYPMO75409 117 aa13.85□□□□□ -0.19
NME3-207ENST00000564628 RPL35AP18077 110 aaKnown RBP13.85□□□□□ -0.19
NME3-207ENST00000564628 S100A7P31151 101 aa13.85□□□□□ -0.19
NME3-207ENST00000564628 RPL29P47914 159 aaKnown RBP13.85□□□□□ -0.19
NME3-207ENST00000564628 PXDC1Q5TGL8 231 aa13.85□□□□□ -0.19
NME3-207ENST00000564628 LEMD1Q68G75 181 aa13.85□□□□□ -0.19
NME3-207ENST00000564628 DPPA3Q6W0C5 159 aa13.85□□□□□ -0.19
NME3-207ENST00000564628 OR8I2Q8N0Y5 310 aa13.85□□□□□ -0.19
NME3-207ENST00000564628 RPP25LQ8N5L8 163 aaKnown RBP13.85□□□□□ -0.19
NME3-207ENST00000564628 C17orf77Q96MU5 243 aa13.85□□□□□ -0.19
NME3-207ENST00000564628 SHANK2-AS3Q9BTD1 123 aa13.85□□□□□ -0.19
NME3-207ENST00000564628 RSG1Q9BU20 258 aa13.85□□□□□ -0.19
NME3-207ENST00000564628 SLC25A39Q9BZJ4 359 aaPredicted RBP13.85□□□□□ -0.19
NME3-207ENST00000564628 SH3BGRL3Q9H299 93 aa13.85□□□□□ -0.19
NME3-207ENST00000564628 DOK5Q9P104 306 aa13.85□□□□□ -0.19
NME3-207ENST00000564628 HIGD1AQ9Y241 93 aa13.85□□□□□ -0.19
NME3-207ENST00000564628 HERC2O95714 4834 aa13.85□□□□□ -0.19
NME3-207ENST00000564628 KMT2AQ03164 3969 aa13.84□□□□□ -0.19
NME3-207ENST00000564628 SULT1A2P50226 295 aa13.84□□□□□ -0.19
NME3-207ENST00000564628 PATE2Q6UY27 113 aa13.84□□□□□ -0.19
NME3-207ENST00000564628 Q6ZRG5 221 aa13.84□□□□□ -0.19
NME3-207ENST00000564628 SCRT1Q9BWW7 348 aa13.84□□□□□ -0.19
NME3-207ENST00000564628 BLOC1S1P78537 153 aa13.83□□□□□ -0.2
NME3-207ENST00000564628 PRR20EP86478 221 aa13.83□□□□□ -0.2
NME3-207ENST00000564628 PRR20CP86479 221 aa13.83□□□□□ -0.2
NME3-207ENST00000564628 PRR20DP86480 221 aa13.83□□□□□ -0.2
NME3-207ENST00000564628 PRR20BP86481 221 aa13.83□□□□□ -0.2
NME3-207ENST00000564628 PRR20AP86496 221 aa13.83□□□□□ -0.2
NME3-207ENST00000564628 ACOT6Q3I5F7 207 aaPredicted RBP13.83□□□□□ -0.2
NME3-207ENST00000564628 LGALS9CQ6DKI2 356 aa13.83□□□□□ -0.2
NME3-207ENST00000564628 GPR82Q96P67 336 aa13.83□□□□□ -0.2
NME3-207ENST00000564628 SLC25A22Q9H936 323 aa13.83□□□□□ -0.2
NME3-207ENST00000564628 GALR1P47211 349 aa13.82□□□□□ -0.2
NME3-207ENST00000564628 B2MP61769 119 aa13.82□□□□□ -0.2
NME3-207ENST00000564628 SNRPD3P62318 126 aaKnown RBP13.82□□□□□ -0.2
NME3-207ENST00000564628 PSMG4Q5JS54 123 aa13.82□□□□□ -0.2
NME3-207ENST00000564628 FFAR4Q5NUL3 377 aa13.82□□□□□ -0.2
NME3-207ENST00000564628 TRPT1Q86TN4 253 aaKnown RBP13.82□□□□□ -0.2
NME3-207ENST00000564628 SAT2Q96F10 170 aaPredicted RBP13.82□□□□□ -0.2
NME3-207ENST00000564628 UHRF2Q96PU4 802 aa13.82□□□□□ -0.2
NME3-207ENST00000564628 PXMP4Q9Y6I8 212 aa13.82□□□□□ -0.2
NME3-207ENST00000564628 OR5G3P0C626 314 aa13.81□□□□□ -0.2
NME3-207ENST00000564628 PSMB3P49720 205 aa13.81□□□□□ -0.2
NME3-207ENST00000564628 MEOX2P50222 304 aa13.81□□□□□ -0.2
NME3-207ENST00000564628 TMEM41BQ5BJD5 291 aa13.81□□□□□ -0.2
NME3-207ENST00000564628 FAM74A1Q5RGS3 127 aa13.81□□□□□ -0.2
NME3-207ENST00000564628 SAMD13Q5VXD3 122 aa13.81□□□□□ -0.2
NME3-207ENST00000564628 MIC13Q5XKP0 118 aa13.81□□□□□ -0.2
NME3-207ENST00000564628 PHLDA1Q8WV24 401 aaPredicted RBP13.81□□□□□ -0.2
NME3-207ENST00000564628 CSTL1Q9H114 145 aa13.81□□□□□ -0.2
NME3-207ENST00000564628 SLC39A9Q9NUM3 307 aa13.81□□□□□ -0.2
NME3-207ENST00000564628 KNCNA6PVL3 124 aa13.8□□□□□ -0.2
NME3-207ENST00000564628 ZNF705EA8MWA4 302 aaPredicted RBP13.8□□□□□ -0.2
NME3-207ENST00000564628 ISLRO14498 428 aa13.8□□□□□ -0.2
NME3-207ENST00000564628 M6PRP20645 277 aa13.8□□□□□ -0.2
NME3-207ENST00000564628 CLLU1Q5K131 121 aa13.8□□□□□ -0.2
NME3-207ENST00000564628 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.8□□□□□ -0.2
NME3-207ENST00000564628 S100A7AQ86SG5 101 aa13.8□□□□□ -0.2
NME3-207ENST00000564628 TMEM37Q8WXS4 190 aa13.8□□□□□ -0.2
NME3-207ENST00000564628 RPL7P18124 248 aaKnown RBP13.79□□□□□ -0.2
NME3-207ENST00000564628 STHQ8IWL8 128 aa13.79□□□□□ -0.2
NME3-207ENST00000564628 OR10G4Q8NGN3 311 aa13.79□□□□□ -0.2
NME3-207ENST00000564628 OR10G9Q8NGN4 311 aa13.79□□□□□ -0.2
NME3-207ENST00000564628 OR10G7Q8NGN6 311 aa13.79□□□□□ -0.2
NME3-207ENST00000564628 DNAH10Q8IVF4 4471 aa13.79□□□□□ -0.2
NME3-207ENST00000564628 ELOA3CA0A087WX78 387 aaPredicted RBP13.78□□□□□ -0.2
NME3-207ENST00000564628 TEX46H3BTG2 121 aa13.78□□□□□ -0.2
NME3-207ENST00000564628 MRPS12O15235 138 aaKnown RBP13.78□□□□□ -0.2
NME3-207ENST00000564628 COX7A2P2O60397 106 aa13.78□□□□□ -0.2
NME3-207ENST00000564628 ID1P41134 155 aa13.78□□□□□ -0.2
NME3-207ENST00000564628 RAB2AP61019 212 aa13.78□□□□□ -0.2
NME3-207ENST00000564628 ACTL10Q5JWF8 245 aa13.78□□□□□ -0.2
NME3-207ENST00000564628 LINC00305Q7Z4B0 112 aa13.78□□□□□ -0.2
NME3-207ENST00000564628 OR1L4Q8NGR5 311 aa13.78□□□□□ -0.2
NME3-207ENST00000564628 PFDN5Q99471 154 aa13.78□□□□□ -0.2
NME3-207ENST00000564628 ACTR3CQ9C0K3 210 aaPredicted RBP13.78□□□□□ -0.2
NME3-207ENST00000564628 RPRMQ9NS64 109 aa13.78□□□□□ -0.2
NME3-207ENST00000564628 PLA2G2EQ9NZK7 142 aa13.78□□□□□ -0.2
NME3-207ENST00000564628 RNF24Q9Y225 148 aa13.78□□□□□ -0.2
NME3-207ENST00000564628 RFNGQ9Y644 331 aa13.78□□□□□ -0.2
NME3-207ENST00000564628 A0A087X0K7 114 aa13.77□□□□□ -0.21
NME3-207ENST00000564628 A0A1W2PPV4 95 aa13.77□□□□□ -0.21
NME3-207ENST00000564628 GIG44P09565 113 aaPredicted RBP13.77□□□□□ -0.21
NME3-207ENST00000564628 FAM213BQ8TBF2 198 aa13.77□□□□□ -0.21
NME3-207ENST00000564628 GATAD1Q8WUU5 269 aa13.77□□□□□ -0.21
NME3-207ENST00000564628 DNAJC4Q9NNZ3 241 aa13.77□□□□□ -0.21
NME3-207ENST00000564628 NMBP08949 121 aa13.76□□□□□ -0.21
NME3-207ENST00000564628 H2AFB1P0C5Y9 115 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 175.2 ms