RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 FAM78BQ5VT40 261 aa9.31□□□□□ -0.92
KARS-204ENST00000564578 SPATA31B1PQ5VZV4 182 aa9.31□□□□□ -0.92
KARS-204ENST00000564578 C9orf62Q8N4C0 152 aa9.31□□□□□ -0.92
KARS-204ENST00000564578 FAM24BQ8N5W8 94 aa9.31□□□□□ -0.92
KARS-204ENST00000564578 OR2G3Q8NGZ4 309 aa9.31□□□□□ -0.92
KARS-204ENST00000564578 PRKDCP78527 4128 aaKnown RBP9.3□□□□□ -0.92
KARS-204ENST00000564578 K7EQG2 157 aa9.3□□□□□ -0.92
KARS-204ENST00000564578 AKR1D1P51857 326 aa9.3□□□□□ -0.92
KARS-204ENST00000564578 LBHQ53QV2 105 aaPredicted RBP9.3□□□□□ -0.92
KARS-204ENST00000564578 WFDC3Q8IUB2 231 aa9.3□□□□□ -0.92
KARS-204ENST00000564578 STXBP6Q8NFX7 210 aa9.3□□□□□ -0.92
KARS-204ENST00000564578 NRN1Q9NPD7 142 aa9.3□□□□□ -0.92
KARS-204ENST00000564578 KANTRA0A1W2PQU2 76 aa9.29□□□□□ -0.92
KARS-204ENST00000564578 SPP1P10451 314 aa9.29□□□□□ -0.92
KARS-204ENST00000564578 S100A7P31151 101 aa9.29□□□□□ -0.92
KARS-204ENST00000564578 PAFAH1B2P68402 229 aa9.29□□□□□ -0.92
KARS-204ENST00000564578 SERF2P84101 59 aa9.29□□□□□ -0.92
KARS-204ENST00000564578 ODF3L2Q3SX64 289 aa9.29□□□□□ -0.92
KARS-204ENST00000564578 MIR17HGQ75NE6 70 aa9.29□□□□□ -0.92
KARS-204ENST00000564578 S100A7AQ86SG5 101 aa9.29□□□□□ -0.92
KARS-204ENST00000564578 GNPNAT1Q96EK6 184 aaPredicted RBP9.29□□□□□ -0.92
KARS-204ENST00000564578 FAM167A-AS1Q96KT0 104 aa9.29□□□□□ -0.92
KARS-204ENST00000564578 WFDC10AQ9H1F0 79 aa9.29□□□□□ -0.92
KARS-204ENST00000564578 TRAV2A0A0B4J234 112 aa9.29□□□□□ -0.92
KARS-204ENST00000564578 OR4C46A6NHA9 309 aa9.29□□□□□ -0.92
KARS-204ENST00000564578 SOCS3O14543 225 aa9.29□□□□□ -0.92
KARS-204ENST00000564578 RPL7P18124 248 aaKnown RBP9.29□□□□□ -0.92
KARS-204ENST00000564578 CD81P60033 236 aa9.29□□□□□ -0.92
KARS-204ENST00000564578 RAB2AP61019 212 aa9.29□□□□□ -0.92
KARS-204ENST00000564578 RPP25LQ8N5L8 163 aaKnown RBP9.29□□□□□ -0.92
KARS-204ENST00000564578 GPR82Q96P67 336 aa9.29□□□□□ -0.92
KARS-204ENST00000564578 ZNF471Q9BX82 626 aaPredicted RBP9.29□□□□□ -0.92
KARS-204ENST00000564578 DNASE2O00115 360 aaPredicted RBP9.28□□□□□ -0.92
KARS-204ENST00000564578 EIF3GO75821 320 aaKnown RBP eCLIP9.28□□□□□ -0.92
KARS-204ENST00000564578 SNRPCP09234 159 aaKnown RBP9.28□□□□□ -0.92
KARS-204ENST00000564578 GALR1P47211 349 aa9.28□□□□□ -0.92
KARS-204ENST00000564578 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.28□□□□□ -0.92
KARS-204ENST00000564578 GTSCR1Q86UQ5 136 aa9.28□□□□□ -0.92
KARS-204ENST00000564578 SLC25A2Q9BXI2 301 aa9.28□□□□□ -0.92
KARS-204ENST00000564578 PLA2G2EQ9NZK7 142 aa9.28□□□□□ -0.92
KARS-204ENST00000564578 FUT9Q9Y231 359 aa9.28□□□□□ -0.92
KARS-204ENST00000564578 H3BQ15 152 aa9.27□□□□□ -0.93
KARS-204ENST00000564578 IGLC2P0DOY2 106 aa9.27□□□□□ -0.93
KARS-204ENST00000564578 ACOT6Q3I5F7 207 aaPredicted RBP9.27□□□□□ -0.93
KARS-204ENST00000564578 BPIFA4PQ86YQ2 179 aa9.27□□□□□ -0.93
KARS-204ENST00000564578 OR10G4Q8NGN3 311 aa9.27□□□□□ -0.93
KARS-204ENST00000564578 OR10G9Q8NGN4 311 aa9.27□□□□□ -0.93
KARS-204ENST00000564578 OR10G7Q8NGN6 311 aa9.27□□□□□ -0.93
KARS-204ENST00000564578 STOML3Q8TAV4 291 aa9.27□□□□□ -0.93
KARS-204ENST00000564578 ZNF503Q96F45 646 aa9.27□□□□□ -0.93
KARS-204ENST00000564578 RPRMQ9NS64 109 aa9.27□□□□□ -0.93
KARS-204ENST00000564578 UBQLN2Q9UHD9 624 aa9.27□□□□□ -0.93
KARS-204ENST00000564578 RNF24Q9Y225 148 aa9.27□□□□□ -0.93
KARS-204ENST00000564578 BAP18Q8IXM2 172 aa9.27□□□□□ -0.93
KARS-204ENST00000564578 DEFB125Q8N687 156 aa9.27□□□□□ -0.93
KARS-204ENST00000564578 FAM110AQ9BQ89 295 aa9.27□□□□□ -0.93
KARS-204ENST00000564578 MRPL32Q9BYC8 188 aaKnown RBP9.27□□□□□ -0.93
KARS-204ENST00000564578 MAP6D1Q9H9H5 199 aa9.27□□□□□ -0.93
KARS-204ENST00000564578 A0A087X0K7 114 aa9.26□□□□□ -0.93
KARS-204ENST00000564578 XKRY2A2RUG3 117 aa9.26□□□□□ -0.93
KARS-204ENST00000564578 OR11H12B2RN74 326 aa9.26□□□□□ -0.93
KARS-204ENST00000564578 TCAPO15273 167 aa9.26□□□□□ -0.93
KARS-204ENST00000564578 ZNF688P0C7X2 276 aa9.26□□□□□ -0.93
KARS-204ENST00000564578 PYYP10082 97 aa9.26□□□□□ -0.93
KARS-204ENST00000564578 HRH4Q9H3N8 390 aa9.26□□□□□ -0.93
KARS-204ENST00000564578 ZNF586Q9NXT0 402 aa9.26□□□□□ -0.93
KARS-204ENST00000564578 TMEM14CQ9P0S9 112 aa9.26□□□□□ -0.93
KARS-204ENST00000564578 SEC11BP0C7V7 166 aa9.25□□□□□ -0.93
KARS-204ENST00000564578 IGHV4-30-4P0DP06 118 aa9.25□□□□□ -0.93
KARS-204ENST00000564578 RHOBP62745 196 aa9.25□□□□□ -0.93
KARS-204ENST00000564578 APRG1Q8IVJ8 170 aa9.25□□□□□ -0.93
KARS-204ENST00000564578 SAT2Q96F10 170 aaPredicted RBP9.25□□□□□ -0.93
KARS-204ENST00000564578 BOLA1Q9Y3E2 137 aa9.25□□□□□ -0.93
KARS-204ENST00000564578 NBEAL2Q6ZNJ1 2754 aa9.25□□□□□ -0.93
KARS-204ENST00000564578 TRAV8-2A0A0B4J237 113 aa9.25□□□□□ -0.93
KARS-204ENST00000564578 SERTM2A0A1B0GWG4 89 aa9.25□□□□□ -0.93
KARS-204ENST00000564578 H3BTX0 84 aa9.25□□□□□ -0.93
KARS-204ENST00000564578 ISLRO14498 428 aa9.25□□□□□ -0.93
KARS-204ENST00000564578 HMGB3O15347 200 aaKnown RBP9.25□□□□□ -0.93
KARS-204ENST00000564578 S100A8P05109 93 aa9.25□□□□□ -0.93
KARS-204ENST00000564578 DEFB131AP59861 70 aa9.25□□□□□ -0.93
KARS-204ENST00000564578 ZNF726P1Q15940 193 aa9.25□□□□□ -0.93
KARS-204ENST00000564578 TMEM41BQ5BJD5 291 aa9.25□□□□□ -0.93
KARS-204ENST00000564578 IGFL4Q6B9Z1 124 aa9.25□□□□□ -0.93
KARS-204ENST00000564578 SSX7Q7RTT5 188 aa9.25□□□□□ -0.93
KARS-204ENST00000564578 CLRN3Q8NCR9 226 aa9.25□□□□□ -0.93
KARS-204ENST00000564578 RAB24Q969Q5 203 aa9.25□□□□□ -0.93
KARS-204ENST00000564578 A0A1W2PPV4 95 aa9.24□□□□□ -0.93
KARS-204ENST00000564578 SLC17A3O00476 420 aa9.24□□□□□ -0.93
KARS-204ENST00000564578 TPT1P13693 172 aaKnown RBP9.24□□□□□ -0.93
KARS-204ENST00000564578 FHITP49789 147 aa9.24□□□□□ -0.93
KARS-204ENST00000564578 TMED6Q8WW62 240 aa9.24□□□□□ -0.93
KARS-204ENST00000564578 FXYD5Q96DB9 178 aa9.24□□□□□ -0.93
KARS-204ENST00000564578 C20orf173Q96LM9 149 aa9.24□□□□□ -0.93
KARS-204ENST00000564578 BIN3Q9NQY0 253 aa9.24□□□□□ -0.93
KARS-204ENST00000564578 AGRNO00468 2067 aa9.23□□□□□ -0.93
KARS-204ENST00000564578 TRBV19A0A075B6N1 114 aa9.23□□□□□ -0.93
KARS-204ENST00000564578 A8MZ25 164 aa9.23□□□□□ -0.93
KARS-204ENST00000564578 NDUFB4O95168 129 aa9.23□□□□□ -0.93
KARS-204ENST00000564578 H2AFB1P0C5Y9 115 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms