RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 IGHV3-74A0A0B4J1X5 117 aa13.85□□□□□ -0.19
COMMD4-208ENST00000563220 IGHV3-66A0A0C4DH42 116 aa13.85□□□□□ -0.19
COMMD4-208ENST00000563220 HELTA6NFD8 242 aa13.85□□□□□ -0.19
COMMD4-208ENST00000563220 HIST1H2BKO60814 126 aa13.85□□□□□ -0.19
COMMD4-208ENST00000563220 HIST1H2BJP06899 126 aa13.85□□□□□ -0.19
COMMD4-208ENST00000563220 RPL7P18124 248 aaKnown RBP13.85□□□□□ -0.19
COMMD4-208ENST00000563220 HIST1H2BOP23527 126 aa13.85□□□□□ -0.19
COMMD4-208ENST00000563220 HIST1H2BBP33778 126 aa13.85□□□□□ -0.19
COMMD4-208ENST00000563220 HIST1H2BDP58876 126 aa13.85□□□□□ -0.19
COMMD4-208ENST00000563220 HIST1H2BCP62807 126 aa13.85□□□□□ -0.19
COMMD4-208ENST00000563220 GNG5P63218 68 aa13.85□□□□□ -0.19
COMMD4-208ENST00000563220 CTAG1AP78358 180 aa13.85□□□□□ -0.19
COMMD4-208ENST00000563220 HIST2H2BEQ16778 126 aa13.85□□□□□ -0.19
COMMD4-208ENST00000563220 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.85□□□□□ -0.19
COMMD4-208ENST00000563220 Q71RC1 249 aaPredicted RBP13.85□□□□□ -0.19
COMMD4-208ENST00000563220 RNF152Q8N8N0 203 aa13.85□□□□□ -0.19
COMMD4-208ENST00000563220 HIST1H2BHQ93079 126 aa13.85□□□□□ -0.19
COMMD4-208ENST00000563220 LINC00479Q96M42 142 aa13.85□□□□□ -0.19
COMMD4-208ENST00000563220 HIST1H2BNQ99877 126 aa13.85□□□□□ -0.19
COMMD4-208ENST00000563220 HIST1H2BMQ99879 126 aa13.85□□□□□ -0.19
COMMD4-208ENST00000563220 RNF24Q9Y225 148 aa13.85□□□□□ -0.19
COMMD4-208ENST00000563220 U3KQE9 123 aa13.85□□□□□ -0.19
COMMD4-208ENST00000563220 IGHV3-49A0A0A0MS15 119 aa13.84□□□□□ -0.19
COMMD4-208ENST00000563220 SLC17A3O00476 420 aa13.84□□□□□ -0.19
COMMD4-208ENST00000563220 GGCTO75223 188 aaKnown RBP13.84□□□□□ -0.19
COMMD4-208ENST00000563220 SLC25A5P05141 298 aaKnown RBP13.84□□□□□ -0.19
COMMD4-208ENST00000563220 SCGB2A2Q13296 93 aa13.84□□□□□ -0.19
COMMD4-208ENST00000563220 FAM209BQ5JX69 171 aa13.84□□□□□ -0.19
COMMD4-208ENST00000563220 LINC01551Q86U37 167 aa13.84□□□□□ -0.19
COMMD4-208ENST00000563220 EXOC3-AS1Q8N2X6 119 aa13.84□□□□□ -0.19
COMMD4-208ENST00000563220 METTL26Q96S19 204 aa13.84□□□□□ -0.19
COMMD4-208ENST00000563220 EPDR1Q9UM22 224 aa13.84□□□□□ -0.19
COMMD4-208ENST00000563220 HIVEP2P31629 2446 aa13.84□□□□□ -0.19
COMMD4-208ENST00000563220 PEX7O00628 323 aa13.84□□□□□ -0.19
COMMD4-208ENST00000563220 PHOX2AO14813 284 aa13.84□□□□□ -0.19
COMMD4-208ENST00000563220 TRGC2P03986 189 aa13.84□□□□□ -0.19
COMMD4-208ENST00000563220 PFN1P07737 140 aaKnown RBP13.84□□□□□ -0.19
COMMD4-208ENST00000563220 S100A7P31151 101 aa13.84□□□□□ -0.19
COMMD4-208ENST00000563220 OTORQ9NRC9 128 aa13.84□□□□□ -0.19
COMMD4-208ENST00000563220 CDC42EP3Q9UKI2 254 aa13.84□□□□□ -0.19
COMMD4-208ENST00000563220 SIGLEC15Q6ZMC9 328 aa13.83□□□□□ -0.2
COMMD4-208ENST00000563220 KLHDC1Q8N7A1 406 aa13.83□□□□□ -0.2
COMMD4-208ENST00000563220 OCC1Q8TAD7 63 aa13.83□□□□□ -0.2
COMMD4-208ENST00000563220 ANAPC16Q96DE5 110 aa13.83□□□□□ -0.2
COMMD4-208ENST00000563220 RNASE1P07998 156 aaKnown RBP13.82□□□□□ -0.2
COMMD4-208ENST00000563220 CD99P14209 185 aa13.82□□□□□ -0.2
COMMD4-208ENST00000563220 NDUFA6P56556 154 aa13.82□□□□□ -0.2
COMMD4-208ENST00000563220 C5orf17Q8NAS9 161 aa13.82□□□□□ -0.2
COMMD4-208ENST00000563220 SRD5A3Q9H8P0 318 aa13.82□□□□□ -0.2
COMMD4-208ENST00000563220 C9JCJ5 164 aa13.82□□□□□ -0.2
COMMD4-208ENST00000563220 ZNF418Q8TF45 676 aaPredicted RBP13.82□□□□□ -0.2
COMMD4-208ENST00000563220 TRAV34A0A0B4J273 112 aa13.81□□□□□ -0.2
COMMD4-208ENST00000563220 IFITM10A6NMD0 228 aa13.81□□□□□ -0.2
COMMD4-208ENST00000563220 H7BYZ3 331 aa13.81□□□□□ -0.2
COMMD4-208ENST00000563220 HILS1P60008 231 aa13.81□□□□□ -0.2
COMMD4-208ENST00000563220 CENPWQ5EE01 88 aa13.81□□□□□ -0.2
COMMD4-208ENST00000563220 C1orf194Q5T5A4 169 aa13.81□□□□□ -0.2
COMMD4-208ENST00000563220 LYPD1Q8N2G4 141 aa13.81□□□□□ -0.2
COMMD4-208ENST00000563220 TMEM190Q8WZ59 177 aa13.81□□□□□ -0.2
COMMD4-208ENST00000563220 UBE2E2Q96LR5 201 aa13.81□□□□□ -0.2
COMMD4-208ENST00000563220 RPH3ALQ9UNE2 315 aa13.81□□□□□ -0.2
COMMD4-208ENST00000563220 ZNF320A2RRD8 509 aa13.8□□□□□ -0.2
COMMD4-208ENST00000563220 S100PP25815 95 aa13.8□□□□□ -0.2
COMMD4-208ENST00000563220 PDE6HQ13956 83 aa13.8□□□□□ -0.2
COMMD4-208ENST00000563220 TCTEX1D4Q5JR98 221 aa13.8□□□□□ -0.2
COMMD4-208ENST00000563220 IGF2BP2-AS1Q96M15 143 aa13.8□□□□□ -0.2
COMMD4-208ENST00000563220 NIT2Q9NQR4 276 aa13.8□□□□□ -0.2
COMMD4-208ENST00000563220 FLNBO75369 2602 aaKnown RBP13.8□□□□□ -0.2
COMMD4-208ENST00000563220 K7EN84 100 aa13.8□□□□□ -0.2
COMMD4-208ENST00000563220 TCRAP04437 139 aa13.8□□□□□ -0.2
COMMD4-208ENST00000563220 LGALS1P09382 135 aaKnown RBP13.8□□□□□ -0.2
COMMD4-208ENST00000563220 TRGC1P0CF51 173 aa13.8□□□□□ -0.2
COMMD4-208ENST00000563220 CNN1P51911 297 aaKnown RBP13.8□□□□□ -0.2
COMMD4-208ENST00000563220 FRZBQ92765 325 aa13.8□□□□□ -0.2
COMMD4-208ENST00000563220 INAFM1C9JVW0 142 aa13.79□□□□□ -0.2
COMMD4-208ENST00000563220 ISLRO14498 428 aa13.79□□□□□ -0.2
COMMD4-208ENST00000563220 PPP1R2P9O14990 202 aa13.79□□□□□ -0.2
COMMD4-208ENST00000563220 IGLV2-8P01709 118 aa13.79□□□□□ -0.2
COMMD4-208ENST00000563220 FOSL1P15407 271 aa13.79□□□□□ -0.2
COMMD4-208ENST00000563220 GNG4P50150 75 aa13.79□□□□□ -0.2
COMMD4-208ENST00000563220 TAS2R60P59551 318 aa13.79□□□□□ -0.2
COMMD4-208ENST00000563220 C18orf65Q6ZTR6 163 aa13.79□□□□□ -0.2
COMMD4-208ENST00000563220 GPHB5Q86YW7 130 aa13.79□□□□□ -0.2
COMMD4-208ENST00000563220 SGK494Q96LW2 274 aa13.79□□□□□ -0.2
COMMD4-208ENST00000563220 ATG101Q9BSB4 218 aa13.79□□□□□ -0.2
COMMD4-208ENST00000563220 GSN-AS1Q9NRJ2 163 aa13.79□□□□□ -0.2
COMMD4-208ENST00000563220 LY96Q9Y6Y9 160 aa13.79□□□□□ -0.2
COMMD4-208ENST00000563220 PRB4P10163 310 aaPredicted RBP13.78□□□□□ -0.2
COMMD4-208ENST00000563220 S100A2P29034 98 aa13.78□□□□□ -0.2
COMMD4-208ENST00000563220 GALR1P47211 349 aa13.78□□□□□ -0.2
COMMD4-208ENST00000563220 TM4SF20Q53R12 229 aa13.78□□□□□ -0.2
COMMD4-208ENST00000563220 C16orf54Q6UWD8 224 aa13.78□□□□□ -0.2
COMMD4-208ENST00000563220 HIST3H2BBQ8N257 126 aa13.78□□□□□ -0.2
COMMD4-208ENST00000563220 GPR82Q96P67 336 aa13.78□□□□□ -0.2
COMMD4-208ENST00000563220 KLF12Q9Y4X4 402 aa13.78□□□□□ -0.2
COMMD4-208ENST00000563220 A0A087X0K7 114 aa13.78□□□□□ -0.2
COMMD4-208ENST00000563220 ZNF785A8K8V0 405 aa13.78□□□□□ -0.2
COMMD4-208ENST00000563220 M0R3E3 92 aa13.78□□□□□ -0.2
COMMD4-208ENST00000563220 TMEM183BQ1AE95 376 aa13.78□□□□□ -0.2
COMMD4-208ENST00000563220 FAM106AQ4KMX7 169 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms